CLUSTAL W (1.81) multiple sequence alignment Tapirus_terrestris GTTAA-TGTAGCTTAATC---CAAAGCGAGGCACTGAAGATGCCCAGATGAGTACTACTA Equus_caballus GTTAA-TGTAGCTTAATAATATAAAGCAAGGCACTGAAAATGCCTAGATGAGT-ATTCTT Coelodonta_antiquitatis GTTAA-TGTAGCTTAATAAT-CAAAGCAAGGCACTGAAAATGCCTAGACGAGC-TTACTA Dicerorhinus_sumatrensis GTTAA-TGTAGCTTAATAAC-CAAAGCAAGGCACTGAAAATGCCTAGACGAGC-CTACCA Rhinoceros_sondaicus GTTAACTGTAGCTTAATAAT-TAAAGCAAGGCATTGAAAATGCCTAGATGAGA-TCACCA Rhinoceros_unicornis GTTAA-TGTAGCTTAATGAT-TAAAGCAAGGCATTGAAAATGCCTAGATGAGA-CTACCA Ceratotherium_simum GTTAA-TGTAGCTTAACAAC-TAAAGCAGGGCATTGAAAATGCCCAGATGAGC-CCACCA Diceros_bicornis GTTAA-TGTAGCTTAACAAC-CAAAGCAGAGCATTGAAAATGCCCAGATGAGC-CTACCA ***** ********** ***** *** **** ***** *** *** * Tapirus_terrestris ACTCCATAAACACACAGGTTTGATCCTAGCCTTTATATTAATTGTTAATAAAATTACACA Equus_caballus ACTCCATAAACACATAGGCTTGGTCCTAGCCTTTTTATTAGTTATTAATAGAATTACACA Coelodonta_antiquitatis GCTCCATAAACACATAGGTTTGGTCCTGGCCTTTTTATTAATTATTAGTAAAACTACACA Dicerorhinus_sumatrensis GCTCCATAAACACATAGGTTTGGTCCTGGCCTTTCTATTAATTGTTAGTAAAACTACACA Rhinoceros_sondaicus ACTCCATAAACATATAGGTTTGGTCCTAGCCTTTCTATTAATTATTAGTAAAATTACACA Rhinoceros_unicornis ACTCCATAAACACATAGGTTTGGTCCTAGCCTTTCTATTAACTATTAGTAAAATTACACA Ceratotherium_simum GCTCCATAAACACAAAGGTTTGGTCCTGGCCTTTCTATTGATTGTTAGTAAAATTACACA Diceros_bicornis GCTCCATAAACATAAAGGTTTGGTCTTGACCTTTCTATTAATTATTAGTAAGATTACACA *********** * *** *** ** * ***** **** * *** ** * ****** Tapirus_terrestris TGCAAGTATCCGCACCCCAGTGAAAATGCCCTCCAAATCA--CA-TTAACGATCAAAAGG Equus_caballus TGCAAGTATCCGCACCCCAGTGAGAATGCCCTCTAAATCACGTC-TCTACGATTAAAAGG Coelodonta_antiquitatis TGCAAGTATCCACGCCCCAGTGAGAATGCCCTCTAAATCGCTTCTTCAACGATTAAAAGG Dicerorhinus_sumatrensis TGCAAGTATCCACGCCCCAGTGAGAATGCCCTCTAAATCA--CC-CCAACGATTAAAAGG Rhinoceros_sondaicus TGCAAGTATCCGCACTCCAGTGAGAATGCCCTTTAAATCA--TC-CCAATGATTAAAAGG Rhinoceros_unicornis TGCAAGTATCCGCACTCCAGTGAGAATGCCCTCTAAATCA--CCCATAACGATTAAAAGG Ceratotherium_simum TGCAAGCATCCGCGCCCTAGTGAAAATGCCCTCTAAATCAC-CC-CTAACGATTAAAAGG Diceros_bicornis TGCAAGCATCCACACCCCAGTGAAAATGCCCTCTAAATCAC-TC-CCAGCGATTAAAAGG ****** **** * * * ***** ******** ***** *** ****** Tapirus_terrestris AGCAGGTATCAAGCACGCTAA-ATTAGCAGCTTACAACACCTTGCTTAACCACACCCCCA Equus_caballus AGCAGGTATCAAGCACACTA--GAAAGTAGCTCATAACACCTTGCTCAGCCACACCCCCA Coelodonta_antiquitatis AGCGGGTATCAAGCACACTAA-AACAGTAGCTCACAACACCTTGCTCAACCACACCCCCA Dicerorhinus_sumatrensis AGCGGGTATCAAGCACACTA--AACAGTAGCTCACAACACCTTGCTCAACCACACCCCCA Rhinoceros_sondaicus AGCAGGTATCAAGCGCACTAA-AACAGTAGCTCATAACACCTTGCTCAACCACACCCCCA Rhinoceros_unicornis AGCAGGTATCAAGTACACTAATAACAGTAGCTAACAACACCTTGCTCAACCACACCCCCA Ceratotherium_simum AGCAGGTATCAAGCACACTAA-AACAGTAGCTCACAACACCTTGCTCAACCACGCCCCCA Diceros_bicornis AGCAGGTATCAAGCACACTAA-AACAGTAGCTCACAACACCTTGCTCAGCCACACCCCTA *** ********* * *** ** **** * *********** * **** **** * Tapirus_terrestris CGGGAAACAGCAGTGATAAAAATTAAGCCATAAACGAAAGTTCGACTAAGTTATATTAAA Equus_caballus CGGGACACAGCAGTGATAAAAATTAAGCTATGAACGAAAGTTCGACTAAGTCATATTAAA Coelodonta_antiquitatis CGGGAAACAGCAGTGACAAAAATTAAGCAATAAATGAAAGTTTGACTAAGTTATACTAAA Dicerorhinus_sumatrensis CGGGAAACAGCAGTGACAAGAATTAAGCAATAAACGAAAGTTTGACTAAGTTATACTAAA Rhinoceros_sondaicus CGGGAGACAGCAGTGACAAAAATTAAGCAATAAACGAAAGTTTGACTAAGTTATACTAAA Rhinoceros_unicornis CGGGAGACAGCAGTGACAAAAATTAAGCAATAAACGAAAGTTTGACTAAGTTATACTAAG Ceratotherium_simum CGGGAGACAGCAGTGATAAAAATTAAGCAATAAACGAAAGTTTGACTAAGTTATACTAAA Diceros_bicornis CGGGAAACAGCAGTGATAAAAATTAAGCAATAAACGAAAGTTTGACTAAGCTATACTAAA ***** ********** ** ******** ** ** ******* ******* *** *** Tapirus_terrestris TCAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTAATATA Equus_caballus TAAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTAATAAA Coelodonta_antiquitatis T-AGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTAATAGA Dicerorhinus_sumatrensis T-AGAGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTAATAGA Rhinoceros_sondaicus C-AGAGCCGGTAAATTTCGTGCCAGCCACCGCGGCCATACGATTGACTCAGATTAATAGA Rhinoceros_unicornis C-AGAGCCGGTAAATTTCGTGCCAGCCACCGCGGCCATACGATTGACTCAAATTAATAGA Ceratotherium_simum C-AGAGTTGGTAAATTTCGTGCCAGCCACCGCGGCCATACGATTAACCCAAATTAATAGA Diceros_bicornis T-AGAGTTGGTAAATTTCGTGCCAGCCACCGCGGCCATACGATTAACCCAAATTAATAGA ** * ************************** ********* ** ** ******* * Tapirus_terrestris -CTCCGGCGTAAAGAGTGTCAAAGATATATACATATAATAAAGTTAAAA-ACTAACTAAG Equus_caballus TCTCCGGCGTAAAGCGTGTCAAAGACTAATACCA-AAATAAAGTTAAAA-CCCAGTTAAG Coelodonta_antiquitatis ACCTCGGCGTAAAGCGTGTCAAAGACATCAACCTTAAATAAAGTTAAAA-TATAATTAAG Dicerorhinus_sumatrensis ACCTCGGCGTAAAGCGTGTCAAAGATAT-AACCTCAAATAAAGTTAAAACCCTAGTTAAG Rhinoceros_sondaicus ACCTCGGCGTAAAGCGTGTCAAAGATAT-AACCCCAAATAAAGTTAAAAGTCTAGTTAAG Rhinoceros_unicornis ACCTCGGCGTAAAGCGTGTCAAAGATAT-AACCCCTAATAAAGTTAAAAACATAGTTAAG Ceratotherium_simum ACTTCGGCGTAAAGCGTGTCAAAGATAC-GACCACAAATAAAGTTAAAA-CCCAATTGAG Diceros_bicornis ACTTCGGCGTAAAGCGTGCCAAAGATAT-AACCACAAATAAAGTTAAAA-CCCAGTCAAG * ********** *** ****** ** ************* * ** Tapirus_terrestris CTGTAAAAAGCCACAGCGAAAAATAAAATAAACTACGAAAGTGACTTTAACACCTCTGAC Equus_caballus CCGTAAAAAGCTACAAC-CAAAGTAAAATAGACTACGAAAGTGACTTTAATACCTCTGAC Coelodonta_antiquitatis CTGTAAAAAGCTACAAC-AAAAACAAAATAAACTACGAAAGTGACTTTAGTATGTTCACC Dicerorhinus_sumatrensis CTGTAAAAAGCCACAAC-AAAAACAAAATAGACCACGAAAGTGACTTTAATACATTCGCC Rhinoceros_sondaicus CTGTAAAAAGCTATAAC-CAAAATAAAATAGACCACGAAAGTGACTTTAACATAT-CACC Rhinoceros_unicornis CTGTAAAAAGCTATAAC-CAAGATAAAATAAACCACGAAAGTGACTTTAATATAT-CACC Ceratotherium_simum CTGTAAAAAGCTACAAC-CAAAATAAAATAGACTACGAAAGTGACTTTAATACAACCGCC Diceros_bicornis CTGTAAAAAGCTACAAC-CAAAATAAAATAAACTACGAAAGTGACTTTAATATAATCACC * ********* * * * ** ****** ** *************** * * Tapirus_terrestris TACACGACAGCTAAGATCCAAACTGGGATTAGATACCCCACTATGCTTAGCCATAAACTA Equus_caballus TACACGATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACTA Coelodonta_antiquitatis CACACGACAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACTT Dicerorhinus_sumatrensis CACACGACAGCTAAGGCCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCT Rhinoceros_sondaicus CACACTACAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCTCAAACCC Rhinoceros_unicornis CACACTACAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCCAAACTC Ceratotherium_simum CACACGACAGCTAGGACCCAAACTGGGATTAGATACCCCACTATGCCTAGCCTTAAACCT Diceros_bicornis CGCACGACAGCTAGGACCCAAACTGGGATTAGATACCCCACTATGCCTAGCCTTAAACTT *** * ***** * ***************************** ***** **** Tapirus_terrestris AAATAATT-TATCCAACAAAATTATTCGCCAGAGTACTACTAGCAATAGCTTAAAACTCA Equus_caballus AAATAGCTTACCACAACAAAGCTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCA Coelodonta_antiquitatis AAATAATTCTTCTCAACAAAATTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCA Dicerorhinus_sumatrensis AAATGATTTCCCCCAACAAAATCATTCGCCAGAGTACTACTAGCAATAGCCTAAAACTCA Rhinoceros_sondaicus AAATAATTCCTTTTAACAAAATTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCA Rhinoceros_unicornis AAATAATTCTTCCCAACAAAATTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCA Ceratotherium_simum AAATAATT-TCTCCAACAAAATTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCA Diceros_bicornis AAATAATT-TTCCCAACAAAATTATTCGCCAGAGTACTACAAGCAACAGCTTAAAACTCA **** * ****** ***************** ***** *** ********* Tapirus_terrestris AAGGACTTGGCGGTGCTTTATATCCCTCTAGAGGAGCCTGTTCCATAATCGATAAACCCC Equus_caballus AAGGACTTGGCGGTGCTTTACATCCCTCTAGAGGAGCCTGTTCCATAATCGATAAACCCC Coelodonta_antiquitatis AAGGACTTGGCGGTGCTTTATATCCCCCTAGAGGAGCCTGTTCCATAACCGATAAACCCC Dicerorhinus_sumatrensis AAGGACTTGGCGGTGCTTTATATCCCCCTAGAGGAGCCTGTTCCATAACCGATAAACCCC Rhinoceros_sondaicus AAGGACTTGGCGGTGCTTTATATCCCCCTAGAGGAGCCTGTTCCATAACCGATAAACCCC Rhinoceros_unicornis AAGGACTTGGCGGTGCTTTATATCCCCCTAGAGGAGCCTGTTCCATAACCGATAAACCCC Ceratotherium_simum AAGGACTTGGCGGTGCTTTATATCCCCCTAGAGGAGCCTGTTCCATAACCGATAAACCCC Diceros_bicornis AAAGACTTGGCGGTGCTTTATATCCCCCTAGAGGAGCCTGTTCCATAATCGATAAACCCC ** ***************** ***** ********************* *********** Tapirus_terrestris GATAAACCTTACCATCCCTTGCCAACACAGCCTATATACCGCCATCTTCAGCAAACCCTA Equus_caballus GATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAACCCTA Coelodonta_antiquitatis GATAAACCTTACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAACCCTA Dicerorhinus_sumatrensis GATAAACCTTACCAACCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAACCCTA Rhinoceros_sondaicus GATAAACCTTACCAACTCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCGAACCCTA Rhinoceros_unicornis GATAAACCTTACCAGCCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCCAACCCTA Ceratotherium_simum GATAAACCCCACCAACCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAACCCTA Diceros_bicornis GATAAACCCTACCAGCCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAACCCTA ******** **** * ***** ** ************************* ******* Tapirus_terrestris AA-AAGGACTCAAAGTAAGCACAAATACAAGACATAAAAAAGTTAGGTCAAGGTGTAGCC Equus_caballus AACAAGGTACCGAAGTAAGCACAAATATCCAACATAAAAACGTTAGGTCAAGGTGTAGCC Coelodonta_antiquitatis AA-AAGGAACTAAAGTAAGCACAAGTATAAGACATAAAAACGTTAGGTCAAGGTGTAGCT Dicerorhinus_sumatrensis AA-AAGGAACTAAAGTAAGCACAAGTATAAGACATAAAAACGTTAGGTCAAGGTGTAGCT Rhinoceros_sondaicus AA-AAGGAACCAAAGTAAGCACAAGTATAAGACATAAAAACGTTAGGTCAAGGTGTAGCT Rhinoceros_unicornis AA-AAGGAACCAAAGTAAGCACAAGTATAAGACATAAAAACGTTAGGTCAAGGTGTAGCT Ceratotherium_simum AA-AAGGAACTAAAGTAAGCACAAGTATAAAACATAAAAACGTTAGGTCAAGGTGTAGCT Diceros_bicornis AC-AAGGAACTAAAGTAAGCACAAGTATAAGACATAAAAACGTTAGGTCAAGGTGTAGCT * **** ************ ** ********* ****************** Tapirus_terrestris TATGGGATGGAGAGAAATGGGCTACATTTTCTACT-CAAGAACAACATAACT---CATTA Equus_caballus CATGGGATGGAGAGAAATGGGCTACATTTTCTACCCTAAGAACAAG--AACTTTAACCCG Coelodonta_antiquitatis TATGGGACGGAGAGAAATGGGCTACATTTTCTACTATAAGAACAAC--AATC---ACCCA Dicerorhinus_sumatrensis TATGGGATGGAGAGAAATGGGCTACATTTTCTACTACAAGAACAAC--AATT---ATCCA Rhinoceros_sondaicus TATGGGTTGGAGAGAAATGGGCTACATTTTCTACTTTAAGAACAAC--AACT---ACCCA Rhinoceros_unicornis TATGGGATGGAGAGAAATGGGCTACATTTTCTACTTCAAGAACAAC--AACT---ACCCA Ceratotherium_simum TATGGGATGGAGAGAAATGGGCTACATTTTCTATTTTAAGAACAAC--AATT---ACCCA Diceros_bicornis TATGGGATGGAGAGAAATGGGCTACATTTTCTACTCTAAGAACAAC--AATT---ACCCA ***** ************************* ******** ** Tapirus_terrestris CACGAAAGTTTTTATGAAACTGAAAACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGA Equus_caballus GACGAAAGTCTCCATGAAACTGGAGACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGA Coelodonta_antiquitatis AACGAAAGCCTTTATGAAACTAAAGACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGA Dicerorhinus_sumatrensis AACGAAAGCCCCCATGAAACTAAGGGCTAAAGGAGGATTTAGCAGTAAATTAAGAACAGA Rhinoceros_sondaicus AACGAAAGCTTTTATGAAATCAAAAGCTAAAGGAGGATTTAGCAGTAAATTAAGAATAGA Rhinoceros_unicornis AACGAAGGCTTTTATGAAATTAAAAGCTAAAGGAGGATTTAGCAGTAAATTAAGAATAGA Ceratotherium_simum AACGAAGGTTTTTATGAAACCAAAAACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGA Diceros_bicornis AACGAAAGTTTCCATGAAACCAAAAACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGA ***** * ****** ****************************** *** Tapirus_terrestris GAGCTTAATTGAACTAGGCCATGAAGCACGCACACACCGCCCGTCACCCTCCTTAAATAT Equus_caballus GAGCTTAATTGAATCAGGCCATGAAGCGCGCACACACCGCCCGTCACCCTCCTTAAATAT Coelodonta_antiquitatis GAGCTTAATTGAATCAGGCCATAAAGCACGCACACACCGCCCGTCACCCTCCTTAAATAC Dicerorhinus_sumatrensis GAGCTTAATTGAACAAGGCCATAAAGCACGCACACACCGCCCGTCACCCTCCTTAAATAC Rhinoceros_sondaicus GAGCTTAATTGAACCAGGCCATAAAGCACGCACACACCGCCCGTCACCCTCCTTAAATAT Rhinoceros_unicornis GAGCTTAATTGAACCAGGCCATAAAGCACGCACACACCGCCCGTCACCCTCCTTAAATAT Ceratotherium_simum GAGCTTAATTGAACCAGGCCATAAAGCACGCACACACCGCCCGTCACCCTCCTTAAATAC Diceros_bicornis GAGCTTAATTGAACTAGGCCATAAAGCACGCACACACCGCCCGTCACCCTCCTTAAATAC ************* ******* **** ******************************* Tapirus_terrestris TAC-ATACTACAA--CTTAACATA-TAAC-AATTGTTAAACATATGAAAGGAGACAAGTC Equus_caballus CAC-AAATCATAA--CATAACATA-AAACCGTGACCCAAACATATGAAAGGAGACAAGTC Coelodonta_antiquitatis CACTAAACCAAAC--CATAATATATTAAC-ACACATTAAACGTATAAAAGGAGACAAGTC Dicerorhinus_sumatrensis CAC-AAACTATAAACCCCAACATATTGACTACACGTTAAACGTATAAAAGGAGACAAGTC Rhinoceros_sondaicus CAT-AAACCACAA--CACAACATATTAAC-ACACGTTGAACATATAAAAGGAGACAAGTC Rhinoceros_unicornis CAT-AAACCACAA--CACAACATATTAAC-GTACGTTGAACATATAAAAGGAGACAAGTC Ceratotherium_simum CCC-GAGCCACAA--CACAACATATTAACTACGCATTACACGTATAAAAGGAGACAAGTC Diceros_bicornis CTC-AAACCACGA--CACAACATATTAACTATGCGTTACACGTATAAAAGGAGACAAGTC * * ** *** ** ** *** ************** Tapirus_terrestris GTAACAAGGTAAGCGTACTGGAAAGTGTGCTTGGACAACCAAAGTGTAGCTTAAACAAAG Equus_caballus GTAACAAGGTAAGTATACCGGAAGGTGTACTTGGATAACCAAAGTGTAGCTTAAACAAAG Coelodonta_antiquitatis GTAACAAGGTAAGCGTACTGGAAAGTGCGCTTGGATAATCAAAGTGTAGCTTAAATAAAG Dicerorhinus_sumatrensis GTAACAAGGTAAGCGTACTGGAAAGTGCGCTTGGACAATCAAAGTGTAGCTTAAACAAAG Rhinoceros_sondaicus GTAACAAGGTAAGTGTACTGGAAAGTGCGCTTGGATAATCAAAGTGTAGCTTAAACAAAG Rhinoceros_unicornis GTAACAAGGTAAGTGTACTGGAAAGTGCGCTTGGATAATCAAAGTGTAGCTTAAACAAAG Ceratotherium_simum GTAACAAGGTAAGCGTACTGGAAAGTGCGCTTGGACAATCAAAGTGTAGCTTAAACAAAG Diceros_bicornis GTAACAAGGTAAGCGTACTGGAAAGTGCGCTTGGACAATCAAAGTGTAGCTTAAACAAAG ************* *** **** *** ****** ** **************** **** Tapirus_terrestris CATCTAGTTTACACCTAGAAGATTTCACACAAAATGACCACTTTGAACTAAAGCTAGCCC Equus_caballus CATCCAGCTTACACCTAGAAGATTTCACTCAAAATGAACACTTTGAACTAAAGCTAGCCC Coelodonta_antiquitatis CACCTAGTTTACACCCAGGAGATTTCATCCAAAATGACCACTTTGAACTAAAGCTAGCCC Dicerorhinus_sumatrensis CACCTAGTTTACACCCAGGAGATTTCATTCAAAATGACCACTTTGAACTAAGGCTAGCCC Rhinoceros_sondaicus CACCTAGTTTACACCCAGGAGATTTCATACAAAATGACCACTTTGAACTAAAGCTAGCCC Rhinoceros_unicornis CACCTAGTTTACACCCAGGAGATTTCATACAAAATGACCACTTTGAACCAAAGCTAGCCC Ceratotherium_simum CACCTAGCTTACACCCAGGAGATTTCATACAAAATGACCACTTTGAACTAAAGCTAGCCC Diceros_bicornis CACCTAGCTTACACCCAGGAGATTTCACACAAAATGACCACTTTGAACCAAAGCTAGCCC ** * ** ******* ** ******** ******** ********** ** ******** Tapirus_terrestris --AAACATCATTCAACTCAACTACCCC-AAAAATTTTCAAATAAAACATTCACCCACCAC Equus_caballus --AAACAATACCTAATTCAATTACCCTTAG--TCACTTAACTAAAACATTCACCAAA--C Coelodonta_antiquitatis --AAACA-AACTCAACTCAACTACTAC-AGACCAACTTAAACAAAACATTTACTAAAACT Dicerorhinus_sumatrensis --AAACA-AACTCAACTCAACTATCAC-AAATCAACTTAAACAAAACATTTACTTAAACC Rhinoceros_sondaicus AAAAATAAAACCTAACCCAATTACCACTAAGCCCACTTAAACAAAACATTTACTTAAACC Rhinoceros_unicornis --AAACAAATCCTAACCCAACTACCACTAAGCCCACTTAAACAAAACATTCACTTAAACC Ceratotherium_simum --AAATA-ACCCCGACCCAACTACTAA-AAACTCACTTGAACAAAGCATTTACCCAAATC Diceros_bicornis --AAACAGACCCCAATCCAACTATTAC-AAACCTACCTAAACAAAACATTTACCCAAACC *** * * *** ** * * *** **** ** * Tapirus_terrestris CATTAAAAGTATAGGAGATAGAAA-TTTTAATCGGCGCTATAGAGAAAGTACCGCAAGGG Equus_caballus CATT-AAAGTATAGGAGATAGAAATTTTAACTTGGCGCTATAGAGAAAGTACCGTAAGGG Coelodonta_antiquitatis TACT-AAAGTATAGGAGATAGAAA-TTTTAACAGGCGCTATAGAAAAAGTACCGCAAGGG Dicerorhinus_sumatrensis TACT-AAAGTATAGGAGATAGAAA-TTTTAATCGGCGCTATAGAGAAAGTACCGCAAGGG Rhinoceros_sondaicus CATT-AAAGTATAGGAGATAGAAA-TTTTAATCGGCGCTATAGAGAAAGTACCGCAAGGG Rhinoceros_unicornis CACT-AAAGTATAGGAGATAGAAA-TTTTAATCGGCGCTATAGAAAAAGTACCGCAAGGG Ceratotherium_simum CATT-AAAGTATAGGAGATAGAAATTTTTAACTGGCGCTATAGAGAAAGTACCGCAAGGG Diceros_bicornis TATT-AAAGTATAGGAGATAGAAATTTTTAACTGGCGCTATAGAGAAAGTACCGCAAGGG * * ******************* *** * *********** ********* ***** Tapirus_terrestris AACGATGAAAGAAATATTAAAAGTACCAAACAGCAAAGCTTACCCCTTCTACCTTTTGCA Equus_caballus AACGATGAAAGATGCATTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCA Coelodonta_antiquitatis AACGATGAAAGAA-TCTTAAAAGTACCAAACAGCAAGGCTTACTCCCTCTACCTTTTGCA Dicerorhinus_sumatrensis AATGATGAAAGAAATCTTAAAAGTACCAAACAGCAAAGCTTACCCCTTTTACCTTTTGCA Rhinoceros_sondaicus AACGATGAAAGAAATCTTAAAAGTACCAAACAGCAAAGCTCACCCCTTCTACCTTTTGCA Rhinoceros_unicornis AACGATGAAAGAAATTTTAAAAGTACCAAACAGCAAAGCTCACCCCTTTTACCTTTTGCA Ceratotherium_simum AACGATGAAAGAAGTCTTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCA Diceros_bicornis AACGATGAAAGAAGTCTTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCA ** ********* ********** ********* *** ** ** * *********** Tapirus_terrestris TAATGATTTAACTAGAATAA-TTTAGCAAAGAGAACTTAAGCTAAATACCCCGAAACCAG Equus_caballus TAATGATTTAACTAGAATAAACTTAGCAAAGAGAACTTAAGCTAAGCACCCCGAAACCAG Coelodonta_antiquitatis TAATGATTTAACTAGAACAATTTTAGCAAAGAGAACTTAAGTTAAACACCCCGAAACCAG Dicerorhinus_sumatrensis TAATGATTTAACTAGAACAACTTTGGCAAAGAGAACTTAAGTTAAACACCCCGAAACCAG Rhinoceros_sondaicus TAATGATTTAACCAGAACAGTTTTAGCAAAGAGAACTTAAGTTAAACACCCCGAAACCAG Rhinoceros_unicornis TAATGATTTAACTAGAACAATTTTAGCAAAGAGAACTTAAGTTAAACACCCCGAAACCAG Ceratotherium_simum TAATGATTTAACTAGAACAATTTTAGCAAAGAGAACTTAAGTTAAACCCCCCGAAACCAG Diceros_bicornis TAATGATTTAACTAGAACAGTTTTAGCAAAGAGAACTTAAGTTAAACTTCCCGAAACCAG ************ **** * ** **************** *** *********** Tapirus_terrestris ACGAGCTACCTATGAACAGTCCCAA-A--GAACAAACTCATCTATGTTGCAAAATAGTGA Equus_caballus ACGAGCTACCTATGAACAGTTACAA--ATGAACCAACTCATCTATGTCGCAAAATAGTGA Coelodonta_antiquitatis ACGAGCTACCTATGAACAGTCCAAA-AACGAACGAACTCATCTATGTGGCAAAATAGTGA Dicerorhinus_sumatrensis ACGAGCTACCTACGAACAGCCCCAAGAACGAGCGAACTCATCTATGTGGCAAAATAGTGA Rhinoceros_sondaicus ACGAGCTACCTATGAACAGTTCCAA----AAACAAACTCGTCTATGTAGCAAAATAGTGA Rhinoceros_unicornis ACGAGCTACCTATGAACAGTTCAAA----AAACAAACTCGTCTATGTAGCAAAATAGTGA Ceratotherium_simum ACGAGCTACCTACGAACAGTCCCAA-AACGAACGAACTCATCTATGTCGCAAAATAGTGA Diceros_bicornis ACGAGCTACCTACGAACAGCCCCAA-AACGAACGAACTCATCTATGTCGCAAAATAGTGA ************ ****** ** * * ***** ******* ************ Tapirus_terrestris GAAGATTTATAGGTAGAGGTGAAAAGCCAAACGAGCCTGGTGATAGCTGGTTATCCA-GA Equus_caballus GAAGATTCGTAGGTAGAGGTGAAAAGCCCAACGAGCCTGGTGATAGCTGGTTGTCCAGAA Coelodonta_antiquitatis GAAGATTTATAGGTAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTGTCCA-AA Dicerorhinus_sumatrensis GAAGATTCATAGGTAGAGGTGAAAAGCCCAACGAGCCTGGTGATAGCTGGTTGTCCA-AA Rhinoceros_sondaicus GAAGATTTATAGGTAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTGTCCA-AG Rhinoceros_unicornis GAAGATTTATAGGTAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTGTCCA-AG Ceratotherium_simum GAAGATTTATAGGTAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTGTCCA-AA Diceros_bicornis GAAGATTTATAGGTAGAGGTGAAAAGCCTATCGAGCCTGGTGATAGCTGGTTGTCCA-AA ******* ******************* * ********************* **** Tapirus_terrestris ACAGAATATTAGTTCAAATTTAAATTTACCTAACAAAAGCACC-ACAACTCTAATGTAAA Equus_caballus ACAGAATTTCAGTTCAAATTTAAATTTACCT---AAAAACTAC-TCAATTCTAATGTAAA Coelodonta_antiquitatis ACAGAATATAAGTTCAAATTTAAATTTACCT---AAAAGCCCC-ACAACTCCTATGTAAA Dicerorhinus_sumatrensis ACAGAATGTAAGTTCAAATTTAAATTTACCT---AAAAGCCCT-GCAACTCCCATGTAAA Rhinoceros_sondaicus TCAGAATATAAGTTCAAATTTAAATTTACCT---AAAAGCCCTAATAACTCCAATGTAAA Rhinoceros_unicornis TCAGGATATAAGTTCAAATTTAAATTTACCT---AAAAGCCCCAACAACTCTAATGTAAA Ceratotherium_simum ACAGAATGTAAGTTCAAATCTAAATTTACCT---AAAAGCCCT-ACAACTTCAATGTAAA Diceros_bicornis ACAGAATGTAAGTTCAAATCTAAATTTACCT---AAAAGCCCC-ACAACTCCAATGTAAA *** ** * ********* *********** **** * ** * ******* Tapirus_terrestris TTTAAATTTTAATCTAAAGAGGTACAGCTCTTTAGACACAGGATACAACCTTCCTTAGAG Equus_caballus TTTAAATTATAGTCTAAAAAGGTACAGCTTTTTAGATACAGGTTACAACCTTCATTAGAG Coelodonta_antiquitatis TTTAAATTATAGTCTAAAAAGGTACAGCTCTTTAGATACAGGATACAACCTCCATTAGAG Dicerorhinus_sumatrensis TTTGGATCATAATCTAAAAAGGTACAGCTCTTTAGATACAGGATACAACCTCCATTAGAG Rhinoceros_sondaicus TTTAAATTATAATCTAAAAAGGTACAGCTCTTTAGATGCAGGATACAACCTTAGTTAGAG Rhinoceros_unicornis TTTAAATTATAATCTAAAAAGGTACAGCTCTTTAGATTCAGGATACAACCTCAGTTAGAG Ceratotherium_simum TTTAAATTATAGTCTAAAAAGGTACAGCTCTTTAGACACAGGATACAACCTTCATTAGAG Diceros_bicornis TTTAAATTATACTCTAAAGGGGTACAGCTCTTTAGACACAGGCTACAACCTTCATTAGAG *** ** ** ****** ********* ****** **** ******** ****** Tapirus_terrestris AGTAAAGACACAAACAAACCATAGTTGGCCTAAAAGCAGCCATCAATTAAGAAAGCGTTC Equus_caballus AGTAAGAACAAGATAAACCCATAGTTGGCTTAAAAGCAGCCATCAATTAAGAAAGCGTTC Coelodonta_antiquitatis AGTAAAAATAAAACT-ATACATAGTTGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTC Dicerorhinus_sumatrensis AGTAAGAACAGAACT-ATACATAGTTGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTC Rhinoceros_sondaicus AGTAAGATCAAAATCAACACATAGTTGGCTTAAAAGCAGCCATCAATTAAGAAAGCGTCT Rhinoceros_unicornis AGTAAGATCAGAATT-ACACATAGTTGGCCTAAAAGCAGCCATCAATTAAGAAAGCGTCT Ceratotherium_simum AGTAAGATCTAAGCC-ACACATAGTTGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTC Diceros_bicornis AGTAAGATCTAGATC-ACACATAGTTGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTCC ***** * ********** ************ *************** Tapirus_terrestris AAGCTCAACAACACAACCATCTTAATCCCAACAATAA---CCAAACAACTCCTAATATAA Equus_caballus AAGCTCAACGACACATCTATCTTAATCCCAACAATCAACCCAAACTAACTCCTAATCTCA Coelodonta_antiquitatis AAGCTCAACAATACAATCACCTTAATTCCAATAACAA---CCAACCAACTCCTAATCCAA Dicerorhinus_sumatrensis AAGCTCAACAATACAACTACCTTAATCCCAACAACAA---CCAACCAACTCCTAACCTAA Rhinoceros_sondaicus AAGCTCAACAACGCAACTACCTTAATTTCAACAATAA---CTAACCAACTCCTAACTTAA Rhinoceros_unicornis AAGCTCAACAACACAACTACCTTAATTCCAACAATAA---TTAACCAACTCCTAACTTAA Ceratotherium_simum AAGCTCAACAGCACAGCCACCTTAATTTCAGCAACAA---CCAATCAACTCCTAATTTAA Diceros_bicornis AAGCTCAACAGCACAGCTACCTTAATCTCAACAACAA---CTAACTAACTCCTAATTTAA ********* ** * ****** ** ** * ** ********* * Tapirus_terrestris CACTGGATTAATCTATTAATATATAGAAGCAATAATGTTAATATAAGTAACAAGAATTAT Equus_caballus TACTGGACTATTCTATCAACACATAGAAGCAATAATGTTAATATGAGTAACAAGAATTAT Coelodonta_antiquitatis TATTGGACCAATCTATTAACAAATAGAAGCAATAATGTTAATATGAGTAACAAGAATTAT Dicerorhinus_sumatrensis TATTGGACCAATCTATCAACAAATAGAAGCAATAATGTTAATATGAGTAACAAGAATCAC Rhinoceros_sondaicus TACTGGACTAATCTATTAATAAATAGAAGCAATAATGTTAATATGAGTAACAAGAACTAT Rhinoceros_unicornis TACTGGACTAATCTATTAATAAATAGAAGCAATAATGTTAATATGAGTAACAAGAACTAT Ceratotherium_simum TATTGGACTAATCTATCAACAAATAGAAGCAATAATGTTAATATGAGTAACAAGAACCAT Diceros_bicornis TATTGGACTAATCTATCAACAAATAGAAGCAATAATGTTAATATGAGTAACAAGAATTAT * **** * ***** ** * ********************** *********** * Tapirus_terrestris TTCTCCCGGCATGAGCTTATATCAGAACGGATAACCACTGATAGTTAACAACAAAATAAA Equus_caballus TTCTCCTTGCATAAGCTTATATCAGAACGAATACTCACTGATAGTTAACAACAAGATAGG Coelodonta_antiquitatis TTCTCCTTGCATAAGCCTATATCAGAACGAATAATCACTGATAGTTAACAATAAAATAGA Dicerorhinus_sumatrensis TTCTCCTTGCATAAGCCTATATCAGAACGAATAATCACTGATAGTTAACAACAAAATAAG Rhinoceros_sondaicus TTCTCCTTGCACAAGCCTATATCAGAACGAATAACCACTGATAGTTAACAATAAGATAAG Rhinoceros_unicornis TTCTCCTTGCATAAGCCTATATCAGAACGAATAACCACTGATAATTAACAATAAGATAAA Ceratotherium_simum TTCTCCTTGCATAAGCCTATATCAGAACGAATGACCACTGATAGTTAACAACAAAATAAA Diceros_bicornis TTCTCCTCGCATAAGCCTATATCAGAACGAATAATCACTGATAGTTAACAACAAAATAGA ****** *** *** ************ ** ******** ******* ** *** Tapirus_terrestris CTCAACCAAACAATTAACTACAATTATTAAACTAACTGTTAATCCAACACAGGCATGCTA Equus_caballus GATAATCCAAAAACTAATCAT--CTATTTAAACCATTGTTAACCCAACACAGGCATGC-- Coelodonta_antiquitatis TACAACCCAATAATAAATAAC-ACTATTAAACCAACTGTTGACCCAACACAGGCATGC-- Dicerorhinus_sumatrensis TATAACCCAACAATAAAAGAC-CCCATTGAACCAATTGTTGACCCAACACAGGCATGC-- Rhinoceros_sondaicus CACAATCCAACAACAAACCAC--CTATCAAACCAATTGTTAATCCAACACAGGCATGC-- Rhinoceros_unicornis CACAATCCAACAACAAACTAC--CTATCAAATCAATTGTTAACCCAACACAGGCATGC-- Ceratotherium_simum CACAACCTAACAATAAACTAC--CTATTAAACCAACTGTTAACCCAACACAGGCATGC-- Diceros_bicornis TATAATCTAACAATAAATCAT--CTATTAAACTAACTGTTAACCCAACACAGGCATGC-- ** * ** ** ** * ** ** * **** * *************** Tapirus_terrestris TACTCCAAGGGAAAGATTAAAAGAAGT-AAAAGGAACTCGGCAAACACAAACCCCGCCTG Equus_caballus -ATCTATAAGGAAAGATTAAAAGAAGT-AAAAGGAACTCGGCAAACACAAACCCCGCCTG Coelodonta_antiquitatis -ATTATAAAGGAAAGATTGAAAAAAGT-AAAAGGAACTCGGCAAACACAAACCCCGCCTG Dicerorhinus_sumatrensis -ATCACAAAGGAAAGATTGAAAAAAGT-AAAAGGAACTCGGCAAACACAAACCCCGCCTG Rhinoceros_sondaicus -ACTTCAAAGGAAAGCTTATAAAAAGTAAAAAGGAACTCGGCAAACACAAACCCCGCCTG Rhinoceros_unicornis -ACTTCAAAGGAAAGATTAAAAAAAGT-AAAAGGAACTCGGCAAACATAAACCCCGCCTG Ceratotherium_simum -ACTTTAAAGGAAAGATTAAAAAAAGT-AAAAGGAACTCGGCAAACACAAACCCCGCCTG Diceros_bicornis -ACTTTAAAGGAAAGATTAAAAAAAGT-AAAAGGAACTCGGCAAACACAAACCCCGCCTG * * ****** ** ** **** ******************* ************ Tapirus_terrestris TTTACCAAAAACATCACCTCTAGCATTACTAATATTAGAGGCACTGCCTGCCCAGTGACA Equus_caballus TTTACCAAAAACATCACCTCTAGCATTTCCAGTATTAGAGGCACTGCCTGCCCAGTGACA Coelodonta_antiquitatis TTTACCAAAAACATCACCTCTAGCATACCCAGTATTAGAGGCACTGCCTGCCCAGTGACA Dicerorhinus_sumatrensis TTTACCAAAAACATCACCTCTAGCATACCCAGTATTAGAGGCACTGCCTGCCCAGTGACA Rhinoceros_sondaicus TTTACCAAAAACATCACCTCTAGCATACCCAGTATTAGAGGCACTGCCTGCCCAGTGACA Rhinoceros_unicornis TTTACCAAAAACATCACCTCTAGCATACCCAGTATTAGAGGCACTGCCTGCCCAGTGACA Ceratotherium_simum TTTACCAAAAACATCACCTCTAGCATATCTAGTATTAGAGGCACTGCCTGCCCAGTGACA Diceros_bicornis TTTACCAAAAACATCACCTCCAGCATATCTAGTATTAGAGGCACTGCCTGCCCAGTGACA ******************** ***** * * **************************** Tapirus_terrestris TCTGTTTAAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCTCTA Equus_caballus TCTGTTTAAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCCCTA Coelodonta_antiquitatis TCTGTTTCAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCTCTA Dicerorhinus_sumatrensis TCTGTTTCAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCTCTA Rhinoceros_sondaicus TCTGTTTCAACGGCCGCGGTATCATAACCGTGCAAAGGTAGCATAATCACTTGTTCTCTA Rhinoceros_unicornis TCTGTTTCAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCTCTA Ceratotherium_simum TATATTTCAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCGTAATCACTTGTTCCCTA Diceros_bicornis TCTGTTTCAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCGTAATCACTTGTTCCCTA * * *** *************** ****************** ************* *** Tapirus_terrestris AATAAGGACTTGTATGAATGGCCACACGAGGGTTTAACTGTCTCTTACTTCTAATCAGTG Equus_caballus AATAGGGACTTGTATGAATGGCCACACGAGGGTTTTACTGTCTCTTACTTCCAATCAGTG Coelodonta_antiquitatis AATAAGGACTTGTATGAATGGCCACACGAGGGTTTTACTGTCTCTTACCTTCAATCAGTG Dicerorhinus_sumatrensis AATAAGGACCTGTATGAATGGCCACACGAGGGTTTTACTGTCTCTTACCTTCAATCAGTG Rhinoceros_sondaicus AATAAGGACTTGTATGAACAGCCACACGAGGGTTTTACTGTCTCTTACTTTCAATCAGTG Rhinoceros_unicornis AATAAGGACTTGTATGAATGGCCACACGAGGGTTTTACTGTCTCTTACTTTCAATCAGTG Ceratotherium_simum AATAGGGACCTGTATGAATGGCCACACGAGGGTTTTACTGTCTCTTACTTTCAATCAGTG Diceros_bicornis AATAGGGACCTGTATGAATGGCCACACGAGGGTTTTACTGTCTCTTACTTTCAATCAGTG **** **** ******** *************** ************ * ******** Tapirus_terrestris AAATTGACCTTCCCGTGAAGAGGCGGGAATAACAAAATAAGACGAGAAGACCCTATGGAG Equus_caballus AAATTGACCTTCCCGTGAAGAGGCGGGAATGACTAAATAAGACGAGAAGACCCTATGGAG Coelodonta_antiquitatis AAATTGACCTCCCCGTGAAGAGGCGGGGATAACATAACAAGACGAGAAGACCCTATGGAG Dicerorhinus_sumatrensis AAATTGACCTCCCCGTGAAGAGGCGGGGATAACGCAACAAGACGAGAAGACCCTATGGAG Rhinoceros_sondaicus AAATTGACCTCCCCGTGAAGAGGCGGGGATGACACAATAAGACGAGAAGACCCTATGGAG Rhinoceros_unicornis AAATTGACCTCCCCGTGAAGAGGCGGGGATAACACAATAAGACGAGAAGACCCTATGGAG Ceratotherium_simum AAATTGACCTTCCCGTGAAGAGGCGGGAATAGCACAATAAGACGAGAAGACCCTATGGAG Diceros_bicornis AAATTGACCTTCCCGTGAAGAGGCGGGAATGACACAATAAGACGAGAAGACCCTATGGAG ********** **************** ** * ** ********************** Tapirus_terrestris CTTCAATTAATCAATTCACTAAAGTATAAACTTCCAACCTACC----AGGCATAAAAAA- Equus_caballus CTTTAATTAACTGATTCACAAAAAACAACACACAAACCTTAACCTTCAGGGACAACAAAA Coelodonta_antiquitatis CTTTAATCAACTAATTCAC-AAAGACAAAACCTTCAACCTACACCCAAGGAATAACAAAG Dicerorhinus_sumatrensis CTTCAATTAACTAATTCAC-AAAAACAAAACCTTCAACCTATATCTAAGGAATAACAAAA Rhinoceros_sondaicus CTTCAATCAACTAATTCAC-AAAAATAAAATATTCAACCTACATACAAGGGATAACAAAA Rhinoceros_unicornis CTTTAATCAACTAATTCAC--AAAATAAAATCTTCAACCTACATATAAGGGATAACAAAA Ceratotherium_simum CTTTAATTAACTAATTCACAAAAAATAAAATCTCTAACCCACATCCAGGGGATAACAAAA Diceros_bicornis CTTTAATTAGCTAATTCAC-AAAAATAAAATCTCTAACCTACATCCAAGGGATAACAAAA *** *** * ****** ** * * * * * ** * ** *** Tapirus_terrestris C-TTTAACTGAATTCGACAATTTCGGTTGGGGTGACCTCGGAGAACAAAAAAACCTCCGA Equus_caballus CTTTTGATTGAATCAG-CAATTTCGGTTGGGGTGACCTCGGAGAACAAAACAACCTCCGA Coelodonta_antiquitatis A-TTTGACTGAATTAG-CGATTTCGGTTGGGGTGACCTCGGAGAACAAAACAACCTCCGA Dicerorhinus_sumatrensis T-TTCGATTGAATTAG-CAATTTCGGTTGGGGTGACCTCGGAGAACAAAACAACCTCCGA Rhinoceros_sondaicus T-TTTGACTGAATTAG-CGATTTCGGTTGGGGTGACCTCGGAGAACAAAACAACCTCCGA Rhinoceros_unicornis T-TTTAACTGAATTAA-CGATTTCGGTTGGGGTGACCTCGGAGAACAAAACAACCTCCGA Ceratotherium_simum C-TTTGACTGAATTAG-TAATTTCGGTTGGGGTGACCTCGGAGAACAAGCCAACCTCCGA Diceros_bicornis C-TTTGACTGAATCAG-CAATTTCGGTTGGGGTGACCTCGGAGAACAAATCAACCTCCGA ** * ***** ***************************** ********* Tapirus_terrestris GTGATTAAAGCTTAGACTAACCAGTC-AAAGCACTACATCACTTATTGATCCAAATTATT Equus_caballus GTGATTTAAATCCAGACTAACCAGTC-AAAATATATAATCACTTATTGATCCAAACCATT Coelodonta_antiquitatis GTGATTAAATTCTAGACTAACTAGTCAAAAATAATACATCACTTATTGATCCAAACCATT Dicerorhinus_sumatrensis GTGATTAAATTCTAGACTAACCAGTCAAAAATAATACATCACTTATTGATCCAAATTATT Rhinoceros_sondaicus GTGATTAAATTCCAGACTAACTAGTCAAAAATATCACATCACTTAGTGATCCAAACTATT Rhinoceros_unicornis GTGATTAAATTCCAGACTTACTAGTCAAAAATATTACATCACTTATTGATCCAAATTATT Ceratotherium_simum GTGATTAAATTCCAGACTTACCAGTCAAAAATATTACATCACTTATTGATCCAAACCATT Diceros_bicornis GTGATTAAATTCCAGACTTACCAGTCAAAAATATCACATCACTTATTGATCCAAACTATT ****** ** ***** ** **** *** * ******** ********* *** Tapirus_terrestris GATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCG Equus_caballus GATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCCAGAGTCCATATCG Coelodonta_antiquitatis GATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCG Dicerorhinus_sumatrensis GATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCG Rhinoceros_sondaicus GATCAACAGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTACAGTTCGTATCG Rhinoceros_unicornis GATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCG Ceratotherium_simum GATCAACGGAATAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCG Diceros_bicornis GATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCG ******* *** ********************************** * *** * ***** Tapirus_terrestris ACAA-TAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGTGCAACCGCTATT Equus_caballus ACAATTAGGGTTTACGACCTCGATGTTGGATCAAGACATCCTAATGGTGCAACCGCTATT Coelodonta_antiquitatis ACAA-TAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGTAACCGCTATT Dicerorhinus_sumatrensis ACAA-TAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGTAACCGCTATT Rhinoceros_sondaicus ACAA-TAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGTAACCGCTATT Rhinoceros_unicornis ACAA-TAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGTGCAACCGCTATT Ceratotherium_simum ACAA-TAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGTGCAACCGCTATT Diceros_bicornis ACAA-TAGGGTTTACGACCTCGATGTTGGATCAGGACACCCCAATGGTGCAACCGCTATT **** **************************** **** ** ******* ********** Tapirus_terrestris AATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATC Equus_caballus AAGGGTTCGTTTGTTCAACGATTAAAGTCTTACGTGATCTGAGTTCAGACCGGAGTAATC Coelodonta_antiquitatis AATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATC Dicerorhinus_sumatrensis AATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATC Rhinoceros_sondaicus AATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATC Rhinoceros_unicornis AATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATC Ceratotherium_simum AATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATC Diceros_bicornis AATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATC ** ************************** ************************* **** Tapirus_terrestris CAGGTCGGTTTCTATCTATTTCATTTTTCTCCCAGTACGAAAGGACAAGAGAAACTAAGC Equus_caballus CAGGTCGGTTTCTATCTATTCTATACTTTTCCCAGTACGAAAGGACAAGAAAAGTAGGGC Coelodonta_antiquitatis CAGGTCGGTTTCTATCTATTTAATATTCCTCCCAGTACGAAAGGAAAAGAGAAATAAGGC Dicerorhinus_sumatrensis CAGGTCGGTTTCTATCTATTTAATATTTCTCCTAGTACGAAAGGAAAAGAGAAATAAGGC Rhinoceros_sondaicus CAGGTCGGTTTCTATCTATTTAATATTTCTCCCAGTACGAAAGGAAAAGAAAAATAAGGC Rhinoceros_unicornis CAGGTCGGTTTCTATCTATTTAATATTTCTCCCAGTACGAAAGGAAAAGAAAAATAAGGC Ceratotherium_simum CAGGTCGGTTTCTATCTATTCAATATTTCTCCTAGTACGAAAGGAAAAGAGAAATAAGGC Diceros_bicornis CAGGTCGGTTTCTATCTATTCAATACTTCTCCCAGTACGAAAGGAAAAGAGAAATAAGGC ******************** ** * *** ************ **** ** ** Tapirus_terrestris CTACTTTACAA-AAGCGCTTTCAGATTAATAGATGATATAATCTAAAACTAATCAATCTA Equus_caballus CCACTTTACAAGAAGCGCCCTCAAACTAATAGATGACATAATCTAAATCTAACTAATTTA Coelodonta_antiquitatis CTACTTCACAA-AAGCGCCTTCAAATCAATAGATGATATAATCTCAATCTAATTAATTTA Dicerorhinus_sumatrensis CCACTTCACAA-AAGCGCCTTCAAACCAATAGATGATATAATCTCAATCTAACTAATTTA Rhinoceros_sondaicus CCACTTCACAA-AAGCGCCTTCAAACCAATAGATGATGTAATCTCAATCTAATAAATTTA Rhinoceros_unicornis CCACTTCATAA-AAGCGCCTTCAAACCAATAGATGATATAATCTCAATCTAATCAATTTA Ceratotherium_simum CCACTTCACAA-AAGCGCCTTCAAATCAATAGATGATATAATCTAAATCTAATTAATTTA Diceros_bicornis CCACTTCACAA-AAGCGCCTTCAAACCAATAGATGATATAATCTCAATCTAATTAATTTA * **** * ** ****** *** * ********* ****** ** **** *** ** Tapirus_terrestris TACACAAACCTACCCTAGATCAGGGTT---CGTTAAGATGGCAGAGCCTGGTAACTGCGT Equus_caballus TAACTTCTACCGCCCTAGAACAGGGCT---CGTTAGGGTGGCAGAGCCCGGAAATTGCAT Coelodonta_antiquitatis CACATAATCTTACCCTAGACCAGGGTC--ATGTTAGGATGGCAGAGCCCGGTAATTGCAT Dicerorhinus_sumatrensis TACATAACTCTACCCTAGACCAGGGTC--GTGTTAGGATGGCAGAGCCCGGTAATTGCAT Rhinoceros_sondaicus TACAC-ATTTTACCCCAGACCAGGGTT--ATGTTAGGATGGCAGAGCCCGGTAACTGCAT Rhinoceros_unicornis TACACAATTTTACCCTAAACCAGGGTTCAATGTTAGGATGGCAGAGCCCGGTAACTGCAT Ceratotherium_simum TACACAACATTGCCCTAGACCAGGGCC--ACGTTAGGATGGCAGAGCC-GGAAATTGCAT Diceros_bicornis TACATAACATTGCCCTAGACCAGGGCC--ACGTTAGGATGGCAGAGCCCGGCAATTGCAT * *** * * ***** **** * ********** ** ** *** * Tapirus_terrestris AAAACTTAAACCTTTATCATCAGAGGTTCAATTCCTCTTCTTAACAACATGTTTATACTT Equus_caballus AAAACTTAAACCTTTACACTCAGAGGTTCAACTCCTCTCCCTAACAACATGTTCATAATT Coelodonta_antiquitatis AAAACTTAAACCTTTATAACCAGAGGTTCAACTCCTCTTCCTAACAACATGTTTACAATC Dicerorhinus_sumatrensis AAAACTTAAACCTTTATAACCAGAGGTTCAACTCCTCTTCCTAACAACATGTTCACAATC Rhinoceros_sondaicus AAAACTTAAACCTTTATAACCAGAGGTTCAACTCCTCTTCCTAACAACATGTTCACAATC Rhinoceros_unicornis AAAACTTAAACCTTTATAACCAGAGGTTCAACTCCTCTTCCTAACAATATGTTCACGATT Ceratotherium_simum AAAACTTAAACCTTTATAATCAGAGGTTCAACTCCTCTTCCTAACAACATGTTCACAATT Diceros_bicornis AAAACTTAAACCTTTATAACCAGAGGTTCAACTCCTCTTCCTAACAACATGTTCACAATT **************** *********** ****** * ****** ***** * * Tapirus_terrestris AACATTATCCTTATAATTATCCCCATTCTTCTCGCCGTAGCATTTCTAACCCTAATCGAA Equus_caballus AACGTCCTCCTCCTAATTGTCCCAATCTTGCTCGCCGTAGCATTCCTCACACTAGTTGAA Coelodonta_antiquitatis AACATCCTCCTCCTAATTGTACCGATCCTACTCGCCGTAGCATTCCTCACACTAGTTGAA Dicerorhinus_sumatrensis AACATACTCCTCCTAATTATCCCAATCCTACTTGCCGTAGCATTCCTCACACTAGTTGAA Rhinoceros_sondaicus AACATTCTCCTCCTAGTCATCCCAATCTTACTCGCTGTGGCATTCCTCACACTAGTTGAA Rhinoceros_unicornis AACATTCTCCTCCTAATCATCCCAATCCTACTTGCTGTAGCATTCCTCACACTAGTTGAA Ceratotherium_simum AATATTCTCCTCCTAGTCATCCCAATCCTACTCGCCGTAGCATTCCTCACACTAGTTGAA Diceros_bicornis AACATTCTCCTCCTAGTCATCCCAATCCTACTCGCCGTAGCATTCCTTACACTAGTTGAA ** * **** ** * * ** ** * ** ** ** ***** ** ** *** * *** Tapirus_terrestris CGCAAAATTCTTGGTTACATACAACTCCGCAAAGGACCAAACATTGTAGGCCCACATGGC Equus_caballus CGAAAAGTCTTAGGCTATATGCAACTTCGCAAAGGACCCAACATCGTAGGCCCCTATGGC Coelodonta_antiquitatis CGCAAAGTATTAGGCTACATACAACTCCGAAAAGGACCAAATATTGTAGGTCCCTACGGT Dicerorhinus_sumatrensis CGCAAAGTATTAGGCTACATACAACTCCGAAAAGGACCAAACATTGTAGGCCCCTATGGC Rhinoceros_sondaicus CGAAAGGTATTAGGCTACATACAACTCCGAAAAGGACCTAACATTGTAGGTCCCTATGGC Rhinoceros_unicornis CGAAAAGTACTAGGCTACATACAACTCCGAAAAGGACCAAACATTGTAGGTCCCTATGGC Ceratotherium_simum CGAAAAGTGCTAGGTTACATACAACTACGAAAAGGACCAAACATTGTAGGCCCCTATGGC Diceros_bicornis CGGAAAGTACTAGGCTACATACAACTTCGAAAAGGACCAAACATTGTAGGCCCCTATGGC ** ** * * ** ** ** ***** ** ******** ** ** ***** ** * ** Tapirus_terrestris CTATTACAACCAATTGCCGATGCAGTCAAACTATTTACTAAAGAACCGCTACAACCACTA Equus_caballus CTACTACAACCTATTGCCGATGCCCTCAAACTATTTATCAAAGAGCCACTACAACCACTA Coelodonta_antiquitatis CTACTACAACCAATTGCTGATGCAATTAAACTATTCACCAAAGAGCCATTAAAACCATCA Dicerorhinus_sumatrensis CTACTCCAACCAATTGCTGATGCAATCAAGCTTTTCATCAAAGAACCACTAAAACCATCC Rhinoceros_sondaicus CTACTCCAACCAATTGCCGATGCAATCAAACTATTCACCAAAGAACCCCTACAACCAGCG Rhinoceros_unicornis CTACTCCAACCAATTGCCGATGCAATCAAACTATTCACCAAAGAACCACTACAACCATCA Ceratotherium_simum CTACTCCAACCAATTGCCGACGCAATCAAATTATTCACCAAAGAACCACTACAGCCATCA Diceros_bicornis CTACTCCAACCAATTGCCGACGCAATCAAACTATTCACTAAAGAACCACTACAACCATCA *** * ***** ***** ** ** * ** * ** * ***** ** ** * *** Tapirus_terrestris ACATCATCAACGACCATATTTATTATTGCCCCTATCCTAGCTCTTACCTTAGCCCTAACA Equus_caballus ACATCATCGACATCCATATTCATCATCGCACCAATCCTAGCCCTAACCCTGGCCTTAACC Coelodonta_antiquitatis ACATCATCAACAACTATATTTATCATTGCCCCAATTCTAGCCCTAACCTTAGCCCTAACA Dicerorhinus_sumatrensis ACATCATCAACAACCATATTTATCATCGCCCCTATCCTAGCCCTAACCCTAGCCCTAACG Rhinoceros_sondaicus ACATCATCAACAACCATATTCATTGTCGCCCCAATCATAGCTCTAACCCTTGCCCTAACA Rhinoceros_unicornis ACATCATCAACATCCATATTCATCATTGCCCCAATCATAGCTCTAACCCTTGCCCTAACA Ceratotherium_simum ACATCATCAACAACCATATTCATCATCGCCCCGATTTTAGCTCTAACCCTAGCCCTAACA Diceros_bicornis ACATCATCAACAACCATATTTATCATTGCCCCAATCTTAGCTCTAACCCTAGCCCTAACA ******** ** * ***** ** * ** ** ** **** ** *** * *** **** Tapirus_terrestris ATATGAATTCCACTGCCCATACCATACCCCCTAATCAACATAAACCTAGGAATCTTATTC Equus_caballus ATATGAATCCCTCTGCCCATACCATACCCACTAATCAACATAAACCTAGGAATTCTATTC Coelodonta_antiquitatis ATATGAATTCCACTACCAATACCTCACCCCCTAATCAACATAAACCTAGGGGTTTTATTC Dicerorhinus_sumatrensis ATATGAATTCCACTACCAATACCCCATCCTCTAATTAACATAAACCTAGGAGTCTTATTC Rhinoceros_sondaicus ATATGAATTCCACTACCAATACCCCACCCTCTAATCAACATAAACTTAGGAGTTTTATTT Rhinoceros_unicornis ATATGAGTTCCATTACCAATGCCCCATCCTCTAATCAACATAAACCTAGGAGTTTTATTC Ceratotherium_simum ATATGAATCCCATTACCCATACCACACCCTCTAATCAACATAAACCTAGGAGTCCTATTC Diceros_bicornis ATATGAATTCCATTACCAATACCATATCCCCTAATCAACATAAACCTAGGAATCCTGTTC ****** * ** * ** ** ** * ** ***** ********* **** * * ** Tapirus_terrestris ATACTAGCCATGTCAAGCTTAGCCGTCTACTCCATCCTATGATCAGGCTGAGCTTCAAAC Equus_caballus ATACTAGCCATGTCCAGCCTAGCTGTCTACTCAATCCTTTGATCAGGATGGGCCTCAAAC Coelodonta_antiquitatis ATACTCGCCATATCAAGCCTAGCCGTCTATTCTATCCTATGATCAGGATGAGCCTCAAAT Dicerorhinus_sumatrensis ATACTCGCCATATCAAGTCTAGCCGTCTATTCCATCTTATGATCAGGATGGGCCTCAAAC Rhinoceros_sondaicus ATACTTGCCATATCAAGCCTAGCCGTCTACTCCATCCTGTGATCAGGATGGGCCTCAAAC Rhinoceros_unicornis ATACTTGCCATATCAAGCCTGGCTGTCTACTCCATCCTGTGATCAGGATGGGCCTCAAAC Ceratotherium_simum ATACTTGCCATGTCGAGCCTAGCCGTCTACTCCATCCTATGATCAGGGTGGGCTTCAAAC Diceros_bicornis ATACTTGCCATATCAAGCCTAGCCGTCTACTCCATCCTATGATCAGGATGGGCTTCAAAC ***** ***** ** ** * ** ***** ** *** * ******** ** ** ***** Tapirus_terrestris TCAAAATACGCATTAATTGGAGCTCTACGAGCAGTAGCACAAACAATCTCGTACGAAGTC Equus_caballus TCAAAATACGCCCTAATTGGAGCTCTACGAGCAGTAGCACAAACCATCTCATACGAAGTA Coelodonta_antiquitatis TCAAAATACGCACTAATCGGAGCCCTACGAGCGGTAGCCCAAACAATCTCATACGAAGTA Dicerorhinus_sumatrensis TCAAAATACGCACTAATCGGAGCCCTACGAGCAGTAGCCCAAACAATCTCATACGAAGTA Rhinoceros_sondaicus TCAAAATACGCACTAATTGGGGCCCTACGAGCAGTAGCCCAAACAATCTCATACGAAGTA Rhinoceros_unicornis TCTAAATATGCACTGATTGGGGCCCTACGAGCAGTAGCCCAAACGATCTCATATGAAGTA Ceratotherium_simum TCAAAATACGCACTAATTGGAGCCCTACGAGCAGTAGCCCAAACAATCTCATATGAAGTA Diceros_bicornis TCAAAATATGCACTAATTGGAGCCCTACGAGCAGTAGCCCAAACAATCTCATACGAAGTA ** ***** ** * ** ** ** ******** ***** ***** ***** ** ***** Tapirus_terrestris ACCCTAGCAATTATTCTCCTATCAGTCCTACTAATAAATGGATCATTCACACTATCCACA Equus_caballus ACTCTAGCAATCATCCTACTCTCAGTCCTCCTAATAAGCGGATCATTCACATTATCAACA Coelodonta_antiquitatis ACCCTAGCAATTATTCTTCTCTCAGTTCTATTAATAAACGGATCATTCACATTATCTACA Dicerorhinus_sumatrensis ACCCTAGCAATTATCCTTCTCTCCGTACTATTAATAAATGGATCATTCACATTATCCACG Rhinoceros_sondaicus ACCCTAGCAATTATTCTTCTCTCCGTACTACTAATAAATGGGTCATTTACACTATCCACA Rhinoceros_unicornis ACCTTAGCAATTATTCTTCTCTCCGTACTACTAATAAACGGGTCATTTACACTGTCCACA Ceratotherium_simum ACTTTAGCAATTATCCTTCTCTCCGTATTACTAATAAACGGATCATTCACACTATCTACA Diceros_bicornis ACTCTAGCAATTATCCTTCTCTCCGTACTACTAATAAATGGGTCATTTACACTATCCACA ** ******* ** ** ** ** ** * ****** ** ***** *** * ** ** Tapirus_terrestris CTAATCACAACTCAAGAACATATTTGACTAATTCTTCCATCATGACCATTAGCTATAATA Equus_caballus CTTATTATTACCCAAGAATACCTCTGATTAATCTTCCCATCATGACCCTTAGCCATAATG Coelodonta_antiquitatis CTAATTACCACCCAAGAACATCTATGACTAATTTTCCCATCATGACCCCTAACCATAATA Dicerorhinus_sumatrensis CTAATCACCACCCAAGAACATCTATGACTAATCTTCCCATCATGACCACTAACCATAATA Rhinoceros_sondaicus CTAATCACCACCCAAGAACACCTATGACTAATCTTTCCATCATGACCACTCACCATAATA Rhinoceros_unicornis CTAATCACCACCCAAGAGCACCTATGACTAATTTTCCCATCATGACCACTAACCATAATA Ceratotherium_simum CTAATCACCACCCAAGAACACCTATGACTAATTTTCCCATCATGACCACTAGCTATAATA Diceros_bicornis CTAATCACCACCCAAGAACACCTATGACTAATCTTCCCATCATGACCACTAACCATAATA ** ** * ** ***** * * *** **** * *********** * * ***** Tapirus_terrestris TGATTCATCTCAACACTAGCAGAAACTAACCGAGCTCCCTTTGACCTAACAGAAGGAGAG Equus_caballus TGATTCATCTCAACATTAGCCGAAACCAACCGAGCTCCATTTGACCTAACAGAAGGAGAA Coelodonta_antiquitatis TGATTCATCTCAACATTAGCAGAAACCAACCGAGCCCCATTCGACTTAACAGAAGGAGAA Dicerorhinus_sumatrensis TGATTCATCTCAACACTAGCAGAAACCAACCGAGCCCCCTTCGACCTAACAGAAGGGGAA Rhinoceros_sondaicus TGATTTATCTCAACACTAGCAGAAACTAACCGAGCCCCATTTGACCTAACAGAAGGAGAA Rhinoceros_unicornis TGATTTATCTCAACACTAGCAGAAACCAACCGAGCCCCATTCGACCTAACAGAAGGAGAG Ceratotherium_simum TGATTTATCTCAACACTAGCAGAAACCAACCGAGCTCCCTTCGACCTGGCAGAGGGAGAA Diceros_bicornis TGATTTATCTCAACACTAGCAGAAACCAACCGAGCTCCCTTCGACCTAACAGAAGGAGAA ***** ********* **** ***** ******** ** ** *** * **** ** ** Tapirus_terrestris TCCGAATTAGTCTCAGGATTCAATGTCGAATACGCAGCTGGCCCATTCGCCCTATTTTTT Equus_caballus TCAGAACTCGTCTCTGGATTCAACGTTGAATACGCAGCCGGCCCATTTGCTCTATTCTTC Coelodonta_antiquitatis TCAGAATTAGTATCAGGCTTCAATGTTGAATACGCAGCTGGTCCATTCGCTCTATTCTTT Dicerorhinus_sumatrensis TCAGAATTAGTATCAGGCTTCAACGTCGAATATGCGGCCGGCCCGTTCGCCCTATTCTTT Rhinoceros_sondaicus TCAGAACTAGTATCCGGCTTCAATGTCGAATATGCAGCCGGCCCATTCGCCCTATTTTTT Rhinoceros_unicornis TCAGAACTAGTATCCGGATTCAATGTCGAATACGCAGCCGGCCCATTCGCCTTATTTTTT Ceratotherium_simum TCAGAATTAGTATCTGGCTTCAATGTCGAATACGCAGCCGGCCCATTCGCCCTGTTCTTT Diceros_bicornis TCAGAATTAGTATCTGGCTTCAATGTCGAATACGCAGCCGGCCCATTCGCCCTATTTTTC ** *** * ** ** ** ***** ** ***** ** ** ** ** ** ** * ** ** Tapirus_terrestris CTAGCGGAATACGCCAACATCATCATAATAAACACCCTTACAACAATTCTATTCCTAGGA Equus_caballus CTAGCAGAATACGCAAACATCATCATGATAAACATCTTCACAACAACCCTATTTCTAGGA Coelodonta_antiquitatis ATAGCAGAATACGCAAACATTATCATAATAAATGCCTTCACAACTATTCTGTTTCTAGGA Dicerorhinus_sumatrensis ATAGCAGAATACGCAAACATCATCATGATAAATGCTTTCACAACCATTCTATTCCTAGGA Rhinoceros_sondaicus ATAGCAGAATACACAAACATCATCATAATAAATGCCTTCACAACTATCTTATTTCTAGGA Rhinoceros_unicornis ATAGCAGAATACACAAACATTATCATAATAAACGCCTTCACAACTATTTTATTTCTAGGA Ceratotherium_simum ATAGCAGAGTACGCAAACATCATCATAATAAACGCCTTCACTACCATCCTCTTTCTAGGA Diceros_bicornis ATAGCAGAGTACGCAAACATTATTATAATAAACGCTTTCACTACCATCCTATTTCTAGGA **** ** *** * ***** ** ** ***** * ** ** * * ** ****** Tapirus_terrestris GCATCCTACAACCCTCACGTACCAGAACTATACACAACTAATCTTATCATTAAAACTCTA Equus_caballus GCATTTCACAACCCCTACCTGCCAGAACTCTACTCAATTAATTTCACCATTAAAGCTCTC Coelodonta_antiquitatis GCATTCCACAACCCTTATATACCAGAACTATTCACAATTAACTTTACTGTCAAAACCCTA Dicerorhinus_sumatrensis GCATTCCACAACCCTTACATACCAGAACTATATACAATCAACTTCACCGTCAAAACCCTA Rhinoceros_sondaicus GCATTCCATAACCCATATATGCCAGAACTATATACCGTCAATTTTACCATTAAAACCTTA Rhinoceros_unicornis GCATTTCATAATCCCTACATACCAGAACTCTACACCGTCAATTTTACCATCAAAACCCTA Ceratotherium_simum GCTTTTCACAACCCCCACATACCAGAACTATACACAATCAATTTCACCACTAAAACCCTA Diceros_bicornis GCATTCCACAACCCCTACATATCAGAACTATACACAATCAACTTCACTACTAAAACCCTA ** * * ** ** * * ******* * * ** * * *** * * Tapirus_terrestris CTCCTAACCATCCTATTCCTATGAATTCGTGCATCCTATCCACGCTTCCGATATGACCAA Equus_caballus CTTCTAACATGTTCCTTCCTATGAATCCGAGCATCCTACCCACGATTCCGATATGACCAA Coelodonta_antiquitatis CTACTAACTGTCTCCTTCCTATGAATCCGAGCATCCTACCCACGATTCCGATATGACCAA Dicerorhinus_sumatrensis CTACTAACTATCTCCTTTCTATGAATCCGAGCATCCTACCCACGATTCCGATACGACCAA Rhinoceros_sondaicus CTACTAACAACCTCCTTCCTATGAATCCGAGCATCCTATCCTCGATTCCGATATGATCAA Rhinoceros_unicornis CTACTAACCATCTCCTTCCTATGAATCCGAGCATCCTACCCTCGATTCCGATATGATCAA Ceratotherium_simum CTATTAACCACATCCTTTCTATGAATCCGAGCATCCTACCCACGATTCCGATACGATCAA Diceros_bicornis CTACTAACCACATCCTTTCTATGAATCCGAGCATCCTATCCACGATTCCGATACGATCAA ** **** ** ******** ** ******** ** ** ******** ** *** Tapirus_terrestris CTCATACACCTACTATGAAAAAATTTCCTACCCCTAACCTTAGCTCTATGTATATGACAC Equus_caballus CTTATACACCTCCTATGAAAGAACTTCCTACCACTCACACTAGCCCTCTGCATATGACAC Coelodonta_antiquitatis CTCATACATCTCCTATGAAAAAACTTTTTACCCCTCACCCTAGCCCTATGCATATGACAT Dicerorhinus_sumatrensis CTCATGCACCTCCTATGAAAAAACTTCTTACCCCTAACTCTAGCCCTATGCATATGACAC Rhinoceros_sondaicus CTCATACATCTACTATGAAAAAACTTCTTACCCCTCACCCTAGCCTTATGCATATGACAT Rhinoceros_unicornis CTTATACACCTATTATGAAAAAACTTCTTACCCCTCACCCTAGCATTATGCATATGACAT Ceratotherium_simum CTCATACACCTCCTATGAAAAAATTTCCTACCCCTCACTCTAGCACTATGCATATGACAC Diceros_bicornis CTCATACACCTTCTGTGAAAAAATTTCCTACCCCTCACTCTAGCACTATGCATATGACAT ** ** ** ** * ***** ** ** **** ** ** **** * ** ******** Tapirus_terrestris GTATCATTACCAATTATAACTTCAAGCATTCCACCTCAAACATAAGAAATATGTCTGATA Equus_caballus GTCTCACTTCCAATCATACTATCCAGCATCCCACCACAAACATAGGAAATATGTCTGACA Coelodonta_antiquitatis GTATCACTGCCAATCATAATATCAAGCATCCCTCCACAAACATAAGAAATATGTCTGACA Dicerorhinus_sumatrensis GTATCACTACCAATCACAATATCAAGCATCCCCCCACAAATATAAGAAATGTGTCTGACA Rhinoceros_sondaicus GTATCACTACCAATTACAATATTAAGCATCCCCCCACAAACATAAGAAATATGTCTGACA Rhinoceros_unicornis GTATCACTACCAATTACAATGTCAAGCATCCCCCCACAAACATAAGAAATATGTCTGACA Ceratotherium_simum GTATCACTACCAATCACAACATCAAGCATCCCCCCACAAACATAAGAAATATGTCTGATA Diceros_bicornis GTATCACTACCAATCACAACATCAAGCATCCCCCCACAAACATAAGAAATATGTCTGACA ** *** * ***** * * * ***** ** ** **** *** ***** ******* * Tapirus_terrestris AAAGAGTTACTTTGATAGAGTAAATAATAGAGGTCCATAATCCTCTTATTTCTAGAAACA Equus_caballus AAAGAGTTACTTTGATAGAGTAAAACATAGAGGCTCA-AACCCTCTTATTTCTAGAACTA Coelodonta_antiquitatis AAAGAATTACTTTGATAGAGTAAATAATAGAGGTTCA-AGCCCTCTTATTTCTAGAACCA Dicerorhinus_sumatrensis AAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTTA-AGCCCTCTCATTTCTAGAACCA Rhinoceros_sondaicus AAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTTA-AACCCTCTTATTTCTAGAACCA Rhinoceros_unicornis AAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTTA-AACCCTCTTATTTCTAGAACCA Ceratotherium_simum AAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTCA-AGCCCTCTTATTTCTAGAATTA Diceros_bicornis AAAGAATTACTTTGATAGAGTAAACAATAGAGGTTCA-AGTCCTCTTATTTCTAAAACGA ***** ****************** ******* * * ***** ******* ** * Tapirus_terrestris TAGGAATCGAACCTACTCCTGAGAATTCAAAATCCTCCGTGCTACCAAATTACACTATAT Equus_caballus CAGGAATTGAACCTGCTCCTGAGAATTCAAAATCCTCCGTGCTACCGAATTACACCATGT Coelodonta_antiquitatis TAGGAATCGAACCTACTCTTAAGAATTCAAAAATCTTCGTGCTACCAAGTTACACCACAT Dicerorhinus_sumatrensis TAGGAATTGAACCTACTCCTAAGAATTCAAAAATCTTCGTGCTACCAAATTACACCATAT Rhinoceros_sondaicus TAGGAATTGAACCTACTCCTAAGAACTCAAAAATCTTCGTGCTACCAAATTACACCACAT Rhinoceros_unicornis TAGGAATTGAACCTACTCCTAAGAACTCAAAAATCTTCGTGCTACCAAATTACACCACAT Ceratotherium_simum TAGGAATTGAACCTACTCCTAAGAACTCAAAAATCTTCGTGCTACCAAACTACACCACAT Diceros_bicornis TAGGAATTGAACCTACTCTTAAGAACTCAAAAATCTCCGTGCTACCAAAATACACCACAT ****** ****** *** * **** ****** ** ********* * ***** * * Tapirus_terrestris CCTACCAGTAAGGTCAGCTAAACAAGCTATCGGGCCCATACCCCGAAAATGTTGGATCAT Equus_caballus CCTACAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGATTAC Coelodonta_antiquitatis TCTACAAGTAAGGTCAGCTAAACAAGCTATCGGGCCCATACCCCGAAAATGTTGGATTAT Dicerorhinus_sumatrensis TCTAAAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGATTAT Rhinoceros_sondaicus TCTACAAGTAAGGTCAGCTAAGCAAGCTATCGGGCCCATACCCCGAAAATGTTGGATCGT Rhinoceros_unicornis TCTATAAGTAAGGTCAGCTAAACAAGCTATCGGGCCCATACCCCGAAAATGTTGGATAAT Ceratotherium_simum TCTATAAGTAAGGTCAGCTAAACAAGCTATCGGGCCCATACCCCGAAAATGTTGGATTAT Diceros_bicornis TCTACAAGTAAGGTCAGCTAAACAAGCTATCGGGCCCATACCCCGAAAATGTTGGATTAT *** *************** ********************************** Tapirus_terrestris ACCCTTCCCGTACTAATAAATCCTCTAATCTCCATAACCATCATAACAACTGTTATTCTA Equus_caballus ACCCTTCCCGTACTAATAAATCCCCTTATCTTCACAACTATTCTAATAACAGTTCTTCTA Coelodonta_antiquitatis ACCCTTCCCGTACTAATTAACCCAATTATCTTTACGACTATTCTAGCAACCGCCATCCTA Dicerorhinus_sumatrensis ACCCTTCCCGTACTAATTAACCCAATTGTCTTCACAACCATCCTAACAACCGTCATCCTA Rhinoceros_sondaicus ACCCTTCCCGTACTAATAAACCCAATTGTCTTCTCAACTATCCTAACAACCGCCATTATA Rhinoceros_unicornis ACCCTTCCCGTACTAATAAACCCAATTGTCTTCTCAACTATCCTAACGACCGCCATTATA Ceratotherium_simum ACCCTTCCCGTACTAATAAACCCAATTGTTTTCTCAACTATCCTAACGACCGCTATTATA Diceros_bicornis ACCCTTCCCGTACTAATAAACCCAATTGTTTTCTCAACCATCTTGACAACCGCCATCCTA ***************** ** ** * * * ** ** * ** * * ** Tapirus_terrestris GGAACCATAATTGTAATAACAAGCTCCCACTGACTAATAATCTGAATTGGTTTCGAAATA Equus_caballus GGAACTATAATCGTTATAATAAGCTCACACTGACTAATAATCTGAATCGGATTTGAAATA Coelodonta_antiquitatis GGGACTATAATTGTAATAACTAGCTCGCACTGACTAATAATTTGAATCGGCTTCGAAATA Dicerorhinus_sumatrensis GGAACTATAATTGTAATAACAAGCTCTCACTGACTAATAATTTGAATCGGCTTCGAAATA Rhinoceros_sondaicus GGAACCATAATTGTAATAATAAGCTCACATTGACTAATAATTTGAATCGGCTTCGAAATA Rhinoceros_unicornis GGGACCGTAATTGTAATAATAAGCTCACATTGACTAATAGTTTGAATCGGCTTTGAAATA Ceratotherium_simum GGAACTATAATCGTAATAACAAGCTCACACTGATTGATAATTTGAATTGGCTTCGAAATA Diceros_bicornis GGGACTATAATTGTAATAACAAGCTCACACTGATTAATAATCTGAATCGGCTTCGAAATA ** ** **** ** **** ***** ** *** * *** * ***** ** ** ****** Tapirus_terrestris AACCTTCTAGCTATCATCCCAATCCTAATAAAAAAATTCAACCCACGGGCAATAGAAGCA Equus_caballus AATCTACTAGCCATTATCCCTATCCTAATAAAAAAGTACAATCCCCGAACCATAGAAGCC Coelodonta_antiquitatis AACCTACTAGCCATCATCCCCATCCTAATAAAAAAATTTAACCCACGAGCCATAGAAGCG Dicerorhinus_sumatrensis AACCTACTAGCCATTATCCCCATCCTAATAAAAAAATTTAACCCACGAGCCATAGAAGCA Rhinoceros_sondaicus AATCTATTAGCCATCATTCCTATCCTAATAAAAAAATTCAACCCACGAGCTATAGAAGCA Rhinoceros_unicornis AACCTATTAGCCATTATTCCTATCCTAATAAAAAAATTTAACCCACGAGCTATAGAAGCA Ceratotherium_simum AACCTATTAGCCATTATCCCCATCCTAATAAAAAAATTCAACCCACGAGCCATAGAAGCA Diceros_bicornis AACCTATTAGCCATCATCCCCATCCTAATAAAAAATTTTAACCCACGAGCCATAGAAGCA ** ** **** ** ** ** ************** * ** ** ** * ******** Tapirus_terrestris TCCACCAAATACTTTCTAACACAAGCCACCGCATCTATACTACTCATAATAGCAATCATT Equus_caballus TCCACCAAATATTTTCTAACCCAAGCCACCGCATCAATACTCCTCATAATAGCGATCATC Coelodonta_antiquitatis TCAACCAAATACTTTCTAACACAAGCTACCGCATCAATACTCCTTATAATAGCTATTATC Dicerorhinus_sumatrensis TCGACCAAATATTTCCTAACACAAGCCACCGCATCAATACTCCTCATAATAGCTATCATC Rhinoceros_sondaicus TCAACCAAATACTTCCTAACACAGGCCACCGCGTCAATACTCCTCATACTAGCAATCATT Rhinoceros_unicornis TCAACCAAATACTTCCTAACACAAGCCACCGCATCAATACTCCTCATATCAGCAATCATC Ceratotherium_simum GCAACCAAATATTTCCTAACACAAGCCACCGCATCAATACTCCTCATAATAGCAATTATC Diceros_bicornis GCAACCAAATACTTCCTAACACAAACCACCGCATCAATACTCCTCATAATAGCAATCATC * ******** ** ***** ** * ***** ** ***** ** *** *** ** ** Tapirus_terrestris ATCAACCTCATATACTCAGGCCAATGAGCTATTACAAAAATTTTTAATCCAATAGCGTCC Equus_caballus ATTAACCTCATACACTCAGGCCAATGAACAATCACAAAAGTCTTCAACCCCACAGCGTCC Coelodonta_antiquitatis ATCAACCTCATATACTCTGGCCAGTGAACAATTACAAAAATCTTCAATCCCACAGCATCC Dicerorhinus_sumatrensis ATCAACCTCATATACTCCGGCCAGTGGGCAGTCACAAAAATCTTTAATCCCACAGCATCT Rhinoceros_sondaicus ATTAACCTTATATACTCTGGTCAATGAACAATTATAAAAATCTTCAACCCAACAGCATCC Rhinoceros_unicornis ATTAACCTTATACACTCTGGCCAATGGACAATTACAAAAATATTCAACCCAACAGCATCC Ceratotherium_simum ATCAACCTTATATTCTCAAGCCAATGGACAATCACAAAAATCTTTAACCCAACAGCATCC Diceros_bicornis ATCAACCTTATATTCTCAGGCCAATGGACAATCACAAAAATCTTCAATCCAACAGCATCT ** ***** *** *** * ** ** * * * **** * ** ** ** * *** ** Tapirus_terrestris GTTATTATAACAACAGCTCTAATTATAAAACTTGGACTATCCCCCTTTCACTTCTGAGTA Equus_caballus ATCATTATAACTTCAGCTCTCGCCATAAAACTTGGACTCACACCATTCCACTTCTGAGTA Coelodonta_antiquitatis ATTATCATAACACTAGCCCTCACCATAAAACTCGGACTATCTCCATTCCACTTCTGAGTG Dicerorhinus_sumatrensis ATTATCATAACACTAGCCCTCGCCATAAAACTCGGCCTCTCTCCCTTCCACTTCTGAGTG Rhinoceros_sondaicus ACCATTATAACATCAGCCCTCATCATAAAACTTGGGCTATCCCCCTTCCATTTCTGAGTA Rhinoceros_unicornis GCCATTATAACATCAGCCCTCATCATAAAACTCGGACTATCCCCCTTCCATTTCTGAGTA Ceratotherium_simum ATCATTATAACATCGGCCCTCATCATAAAACTCGGACTTTCCCCATTCCACTTCTGAGTA Diceros_bicornis ATCATTATAACATCAGCTCTCGTCATAAAACTCGGACTTTCCCCATTCCACTTCTGAGTA ** ***** ** ** ******** ** ** * ** ** ** ******** Tapirus_terrestris CCCGAAGTAACACAAGGTATCTCACTTACTTCAGGCTTAATTCTACTCACGTGACAAAAA Equus_caballus CCCGAAGTCACACAGGGCATCTCATTAACATCAGGTCTCATCCTACTTACATGACAAAAA Coelodonta_antiquitatis CCCGAAGTAACTCAAGGCATTTCATTAACATCAGGCCTAATCCTACTTACATGACAAAAG Dicerorhinus_sumatrensis CCCGAAGTCACCCAAGGCATTTCACTGGCATCAGGCCTAATCTTGCTTACATGACAAAAA Rhinoceros_sondaicus CCCGAAGTCACCCAAGGCATCTCACTAATATCAGGCCTAATCCTACTCACATGACAAAAA Rhinoceros_unicornis CCCGAAGTCACCCAAGGCATCTCACTAATATCAGGCCTAATCCTACTCACATGACAAAAA Ceratotherium_simum CCCGAAGTTACCCAAGGCATTCCACTAGTATCAGGCCTAATTCTGCTCACATGACAAAAA Diceros_bicornis CCCGAAGTTACCCAAGGCATTTCACTAATATCTGGCCTAATCCTGCTCACATGACAAAAA ******** ** ** ** ** ** * ** ** * ** * ** ** ******** Tapirus_terrestris TTAGCCCCAATATCAATCTTATACCAAATTTCACCATCCATCAACCCAAACATACTACTA Equus_caballus CTAGCCCCAATATCAATCCTATATCAAATCTCACCCTCAATTAACCTAAATATCTTATTA Coelodonta_antiquitatis CTAGCACCAATATCAATTCTATACCAAATTGCACCATCCATTAACCTAGATATACTAATA Dicerorhinus_sumatrensis CTAGCACCAATATCAGTACTATACCAAATTGCACCCTCCATTAACCTAGACCTGCTAATA Rhinoceros_sondaicus CTAGCACCAATATCAATCCTATACCAAATCGCACCCTCCACTAACCTAAATATATTAATA Rhinoceros_unicornis TTAGCACCAATATCAATCCTATATCAAATCGCACCCTCAATCAACCTAGACATACTAATA Ceratotherium_simum CTAGCACCAATATCAGTCCTATACCAAATCGCACCCTCCATTAACCTAGACATACTAATA Diceros_bicornis CTAGCACCAATATCAGTCCTATACCAAATTGCACCTTCCATTAACCCAAATATACTAATG **** ********* * **** ***** **** ** * **** * * * ** * Tapirus_terrestris ACTGCCGCTATTTTATCCATTATAGTAGGAGGCTGAGGAGGTCTAAACCAAACTCAACTA Equus_caballus ACTATAGCCGTACTGTCAATCCTAGTAGGAGGCTGAGGCGGTCTCAACCAAACCCAACTA Coelodonta_antiquitatis ACCATAGCCATTCTATCCATCTTAGTAGGAGGTTGAGGAGGTCTTAACCAAACCCAACTA Dicerorhinus_sumatrensis ACCATAGCCATTTTATCCATCCTAATAGGAGGGTGAGGAGGCCTCAACCAAACCCAACTA Rhinoceros_sondaicus ACATCAGCCCTCCTATCTATCCTAGTAGGAGGCTGAGGAGGCCTCAACCAAACCCAACTA Rhinoceros_unicornis ACCTCAGCCCTCCTATCCATCCTAGTAGGAGGCTGAGGGGGCCTTAACCAAACCCAACTA Ceratotherium_simum ACCTCAGCCCTCTTATCCATCCTAGTAGGTGGATGAGGAGGCCTCAACCAAACTCAACTA Diceros_bicornis GCTACGGCCCTCCTTTCTATCCTAGTAGGAGGGTGAGGAGGCCTCAACCAAACTCAACTA * ** * * ** ** ** **** ** ***** ** ** ******** ****** Tapirus_terrestris CGAAAAATCATAGCATATTCATCAATTGCCCACATGGGATGAATAACAGCCATCCTAATT Equus_caballus CGAAAAATCATAGCATACTCGTCAATCGCGCATATAGGATGAATAACAGCTGTCCTAGTA Coelodonta_antiquitatis CGAAAAATTATAGCATACTCATCAATCGCCCACATAGGATGAATAACAGCCATTCTAATA Dicerorhinus_sumatrensis CGAAAAATCATAGCATACTCATCAATCGCCCACATAGGATGAATAACAGCCATCCTAATG Rhinoceros_sondaicus CGAAAAATCATAGCATACTCATCAATCGCCCACATAGGCTGAATAACAGCCATTCTAGCA Rhinoceros_unicornis CGAAAAATCATAGCATACTCATCAATCGCCCACATAGGTTGAATAACAGCTATCCTAACA Ceratotherium_simum CGAAAAATCATAGCATACTCATCAATCGCCCACATAGGATGAATAACAGCTATTTTAACA Diceros_bicornis CGAAAAATCATAGCATACTCATCAATTGCCCATATAGGATGAATAACAGCTATTCTAATA ******** ******** ** ***** ** ** ** ** *********** * ** Tapirus_terrestris TACAACCCAACAATAACAATACTAAACATACTAATCTATATCATAACAACACTTACCATA Equus_caballus TATAACCCAACACTAACAATACTAAACATATTAATTTACATTATAATAACACTCACAATA Coelodonta_antiquitatis TACAACCCAACAATAACAGTACTCAACATGCTAATCTACATTACAATAACACTCACCACA Dicerorhinus_sumatrensis TACAACCCAACAATAACAGTACTCAACATACTAATTTACATCACAATAACACTCACTACA Rhinoceros_sondaicus TATAACCCAACAATAACAGTACTCAACATACTAATCTATATCATAATAACACTTACTACA Rhinoceros_unicornis TATAATCCAACAATAACAATACTCAACATACTAATCTACATCATAATAACACTTACCACA Ceratotherium_simum TATAACCCTACAATAACAGCACTCAACATACTAATCTACATCATAATGACGCTCACCACA Diceros_bicornis TATAACCCAACAATAACAATACTCAACATGCTAATCTACATCATAATAACACTCACTACA ** ** ** *** ***** *** ***** **** ** ** * ** ** ** ** * * Tapirus_terrestris TTCATGATATTCATAACTCACTCCTCAACCACAACTCTATCACTCTCAAATACATGAAAT Equus_caballus TTCATACTATTTATCCACAGCTCCTCTACTACAACACTATCACTCTCCCACACATGAAAC Coelodonta_antiquitatis TTTATACTATTTATACTTAACTCCTCAACCACAACACTATCGCTATCCCACATATGAAAC Dicerorhinus_sumatrensis TTTATATTATTTATAACTAACTCTTCAACCACAACACTATCACTCTCTCACATATGAAAC Rhinoceros_sondaicus TTTATGCTACTTATACTCAACTCCTCAACCACAACACTATCCCTTTCCCACACATGAAAC Rhinoceros_unicornis TTTATACTACTCATACTCAACTCCTCAACCACAACACTATCTCTCTCCCACACATGAAAC Ceratotherium_simum TTCATATTATTTATACTCAACTCCTCAACCACAACACTATCACTTTCCCACACATGAAAC Diceros_bicornis TTCATATTATTTATACTCAACTCCTCAACCACAATACTATCACTCTCCCTCACATGAAAC ** ** ** * ** *** ** ** **** ***** ** ** * ****** Tapirus_terrestris AAAAATCCCCTAATTACCACACTTATCCTAACAACCCTACTATCTCTAGGTGGCCTCCCA Equus_caballus AAAATACCTCTAACCACTACACTAATCTTAATTACCTTACTATCCATAGGAGGCCTCCCC Coelodonta_antiquitatis AAAACTCCTCTAGTCACCTCACTCATCCTAATTACCATATTATCCCTAGGAGGCTTACCC Dicerorhinus_sumatrensis AAAACACCCCTAATCACCTCGCTCATCCTGATTACCATACTATCCCTAGGAGGCCTGCCC Rhinoceros_sondaicus AAAACACCCTTAATCACCTCCCTCATCTTGATCACCATATTATCCCTAGGAGGCCTACCA Rhinoceros_unicornis AAGACACCCCTAATCACCTCCCTTATCTTAATTATTATACTATCCCTAGGAGGCCTACCA Ceratotherium_simum AAAACACCCCTAATCACCTCGCTCATCTTAATCACCATACTATCACTAGGAGGCCTCCCA Diceros_bicornis AAAACACCCCTAATTACCTCGCTCATCCTAATCACCATACTATCACTAGGAGGTCTACCA ** * ** ** ** * ** *** * * * ** **** **** ** * ** Tapirus_terrestris CCACTATCAGGATTCATACCCAAATGACTAATCATCCAAGAACTTACAAAAAATAATAGC Equus_caballus CCACTATCAGGATTCATACCCAAATGAATAATCATTCAAGAGCTCACCAAAAATAGCAGC Coelodonta_antiquitatis CCACTATCAGGATTTATCCCAAAATGAATAATCATCCAAGAACTAACAAAAAACAACAGC Dicerorhinus_sumatrensis CCACTATCAGGATTTATCCCCAAGTGAATAATCATCCAAGAATTGACAAAAAACAATAGC Rhinoceros_sondaicus CCACTATCAGGATTTATACCTAAATGAATAATCATCCAAGAACTAACAAAAAACAACAGC Rhinoceros_unicornis CCACTATCAGGATTCATTCCCAAATGAATAATCATTCAAGAACTAACAAAAAACAACAGC Ceratotherium_simum CCACTATCCGGATTTATCCCCAAATGAATAATTATTCAAGAGCTAACAAAAAACGACAGC Diceros_bicornis CCACTATCCGGGTTCATCCCCAAATGAATAATCATTCAAGAACTAACAAAAAATGACAGC ******** ** ** ** ** ** *** **** ** ***** * ** ***** *** Tapirus_terrestris ATTATTCTACCAACATTAATAGCCATTACAGCACTACTCAATCTATATTTCTACATACGA Equus_caballus ATCATCCTCCCCACACTAATAGCCATTATAGCACTACTCAACCTCTACTTCTACATACGA Coelodonta_antiquitatis ATTATCCTACCAACATCCATAGCCATCATAGCCCTACTCAACCTATACTTCTACATACGT Dicerorhinus_sumatrensis ATTATCCTACCAACATCTATAGCCATCATAGCCCTACTCAACTTATATTTCTACATACGC Rhinoceros_sondaicus ATCATCCTACCAACATCCATAGCCATCATAGCCCTACTCAACCTATACTTCTATTTACGC Rhinoceros_unicornis ATCATTCTACCAACATCCATAGCCATCATAGCCCTACTCAACCTATACTTCTATTTACGC Ceratotherium_simum ATCATCCTACCAACATCCATAGCCATTATAGCCCTACTCAACCTATACTTCTATATACGC Diceros_bicornis ATCATCCTACCAACATCCATAGCCATTATAGCCCTACTCAACCTATACTTCTATATACGC ** ** ** ** *** ******** * *** ******** * ** ***** **** Tapirus_terrestris CTGGCCTACTCCACATCACTAACAATATTCCCATCAACAAATAACATAAAAATAAAATGA Equus_caballus CTAACCTATTCCACCTCACTGACCATATTCCCATCCACAAACAACATAAAAATAAAATGA Coelodonta_antiquitatis CTAACCTACTCCACCTCACTAACAATATTCCCATCAACAAACAACATAAAAATAAAATGA Dicerorhinus_sumatrensis CTAACCTATTCCACATCACTAACAATATTTCCATCAACAAACAACATAAAAATAAAATGA Rhinoceros_sondaicus CTAACCTACTCCACCTCACTAACAATATTCCCATCAACCAACAATATAAAAATAAAATGA Rhinoceros_unicornis CTAACCTACTCCACCTCACTAACAATATTTCCATCAACCAACAACATAAAAATAAAATGA Ceratotherium_simum CTAACCTACTCCACCTCACTAACAATATTCCCATCAACAAACAACATAAAAATAAAATGA Diceros_bicornis CTAACCTACTCCACCTCACTAACAATATTCCCATCAATAAACAACATAAAAATAAAATGA ** **** ***** ***** ** ***** ***** * ** ** *************** Tapirus_terrestris CAGTTCGAAAACACAAAGCAAACAATCCTCCTACCAATACTAATCACTATATCTACACTT Equus_caballus CAATTCGAAACC---AAACGAATTACTCTCTTACCCCCGTTAATTGTTATATCCTCCCTA Coelodonta_antiquitatis CAATTCGAGAACTCAAACCGGATAATCTTCCTACCCACACTAACCATTATATCAACATTA Dicerorhinus_sumatrensis CAATTCGAAAACTCGAATCGGATAAACCTCCTACCCACACTAACCATTATATCAACACTA Rhinoceros_sondaicus CAATTTGAAAACTCAAAACGAATAAACCTATTACCCACACTAACCATCATATCAACACTA Rhinoceros_unicornis CAATTTGAAAACTCAAAACAAATAAGCCTACTACCCACACTAATCATCATATCAACACTA Ceratotherium_simum CAATTTGAAAACCCAAAACGAATAAACTTTCTACCTACACTAATTATCATGTCAACCCTA Diceros_bicornis CAATTTGAAAACTCAAAACGAATAAATTTCCTACCTACACTAATCATCATATCAACCTTG ** ** ** * * ** * * * * **** *** ** ** * * Tapirus_terrestris CTCTTACCCTTAACACCAATAATTTCCATCCTAGAATAGGAATTTAGGTT---ACA-TAG Equus_caballus CTCCTCCCCCTAACCCCCATACTATCAATTTTGGACTAGGAATTTAGGTTAACATCCCAG Coelodonta_antiquitatis CTCCTCCCACTAACACCAATCATATCTATCCTAAACTAGGAATTTAGGTT---ACACCAG Dicerorhinus_sumatrensis CTACTTCCACTAACACCAATCATATCTATTCTAAACTAGGAATTTAGGTT---ACACTAG Rhinoceros_sondaicus CTCCTCCCTCTAACACCAACTATATTCATTCTAAACTAGGAATTTAGGTT---ACACCAG Rhinoceros_unicornis CTCCTCCCACTAATACCAACCATATCCATTCTAAACTAGGAATTTAGGTT---ACACTAG Ceratotherium_simum CTCCTCCCACTAACACCAATCATATCTACTCTAAACTAGGAATTTAGGTT---ACACCAG Diceros_bicornis CTCCTCCCACTAACACCAATCATATCCATTCTGAACTAGGAATTTAGGTT---ACACCAG ** * ** *** ** * * * * * * ************** * ** Tapirus_terrestris ACCAAGAGCCTTCAAAGCTCTAAGCAAGAGAAAAAATCACTTAATTCCTGCGTACTAAGG Equus_caballus ACCAAGAGCCTTCAAAGCTCTAAGCA--AGTG-AATCCACTTAATTCCTGCATACTAAGG Coelodonta_antiquitatis ACCAAGAGCCTTCAAAGCCCTAAGCA--AGTACAAATTACTTAATTCCTGTTAACTAAGG Dicerorhinus_sumatrensis ACCAAGAGCCTTCAAAGCCCTAAGCA--AGTACAAATTACTTAATTCCTGCTTACTAAGG Rhinoceros_sondaicus ACCAAGGGCCTTCAAAGCCCCAAGCA--AGTATAAATTACTTAATTCCTGCCAACTAAGG Rhinoceros_unicornis ACCAAGAGCCTTCAAAGCCCTAAGCA--AGTATAAACTACTTAATTCCTGCCAACTAAGG Ceratotherium_simum ACCAAGGACCTTCAAAGCCCTAAGCA--AGTACAAACTACTTAATTCCTGCCAACTAAGG Diceros_bicornis ACCAAGAGCCTTCAAAGCCCTAAGCA--AGTATAAATCACTTAATTCCTGCCAACTAAGG ****** ********** * ***** ** ** ************ ******* Tapirus_terrestris GCTGCAAGATTATACCTTACATCAATTGAACGCAAATCAAACACTTTAATTAAGCTAAGC Equus_caballus ACTGCGAGACTCTATCTCACATCAATTGAACGCAAATCAAACTCTTTTATTAAGCTAAGC Coelodonta_antiquitatis GCTGCAGGACTCTATCCTACATCAATTGAATGCAAATCAAACACTTTAATTAAGCTAAAC Dicerorhinus_sumatrensis GCTGCAAGACTCTATCCTACATCAATTGAATGCAAATCAAACACTTTAATTAAGCTAAAC Rhinoceros_sondaicus GCTGCAAGACTCTATCCTACATCAATTGAATGCAAATCAAACACTTTAATTAAGCTAAAC Rhinoceros_unicornis GCTGCAAGACTCTATCCTACATCAATTGAATGCAAATCAAGCACTTTAATTAAGCTAAAC Ceratotherium_simum GCTGCAAGACTCTATCTTACATCAACTGAATGCAAATCAAACACTTTAATTAAGCTAAAC Diceros_bicornis GCTGCAAGACTCTATCTTACATCAACTGAATGCAAATCAAACACTTTAATTAAGCTAAAC **** ** * ** * ******* **** ********* * **** ********** * Tapirus_terrestris CCTCACTAGATTGACGGGCTATTATCCCGCGAAATTTTAGTTAACAGCTAAATACCCTAA Equus_caballus CCTTACTAGATTGGTGGGCTACCATCCCACGAAATTTTAGTTAACAGCTAAATACCCTAA Coelodonta_antiquitatis CCTCCCTAGATTGGTGGGCCACTATCCCACGAAATTTTAGTTAACAGCTAAATACCCTAA Dicerorhinus_sumatrensis CCTCCCTAGATTGGTGGGCCACTATCCCACGAAATTTTAGTTAACAGCTAAATACCCTAA Rhinoceros_sondaicus CCTCCCTAGATTGGTGGGCCACTATCCCACGAAACTTTAGTTAACAGCTAAACACCCTAA Rhinoceros_unicornis CCTCCCTAGATTGGTGGGCCACTATCCCACGAAACTTTAGTTAACAGCTAAATACCCTAA Ceratotherium_simum CCTCCCTAGATTGGTGGGCCACTATCCCACGAAATTTTAGTTAACAGCTAAATACCCTAA Diceros_bicornis CCTCCCTAGATTGGTGGGCCACTATCCCACGAAATTTTAGTTAACAGCTAAATACCCTAA *** ******** **** * ***** ***** ***************** ******* Tapirus_terrestris ACAACTGGCTTCAATCTACTTCTCCCGCCGCCTAAAAAAAAAAGGCGGGAGAAGCCCCGG Equus_caballus TCAACTGGCTTCAATCTACTTCTCCCGCCGCCT-AGAAAAAAAGGCGGGAGAAGCCCCGG Coelodonta_antiquitatis TCAACTGGCTTCAATCTACTTCTCCCGCCGCCT-AAGAAAAAAGGCGGGAGAAGCCCCGG Dicerorhinus_sumatrensis TCAACTGGCTTCAATCTACTTCTCCCGCCGCCT-AGGAACAAAGGCGGGAGAAGCCCCGG Rhinoceros_sondaicus TCAACTGGCTTCAATCTACTTCTCCCGCCGCCT---AGAAAAAGGCGGGAGAAGCCCCGG Rhinoceros_unicornis TCAACTGGCTTCAATCTACTTCTCCCGCCGCTC--AGAAAAAAGGCGGGAGAAGCCCCGG Ceratotherium_simum TCAACTGGCTTCAATCTACTTCTCCCGCCGCCT--AAAAAAAAGGCGGGAGAAGCCCCGG Diceros_bicornis TCAACTGGCTTCAATCTACTTCTCCCGCCGCTC--AGGAAAAAGGCGGGAGAAGCCCCGG ****************************** * ******************** Tapirus_terrestris CAG-TATTGAAGCTGCTTCTTCGAATTTGCAATTCAATGTG-AAATTCACCACGAGGCTT Equus_caballus CAGAAATTGAAGCTGCTCCTTTGAATTTGCAATTCAATGTGAAAATTCACCACGGGACTT Coelodonta_antiquitatis CAG-AATTGAAGCTGCTTCTTTGAATTTGCAATTCAATATG-AAATTCACCACAGAGCTT Dicerorhinus_sumatrensis CAG-AATTGAAGCTGCTTCTTTGAATTTGCAATTCAATATG-AAATTCACCACAGGGCTT Rhinoceros_sondaicus CAG-AATTGAAGCTGCTTCTTTGAATTTGCAATTCAACATG-AAATTCACCACGAGACCT Rhinoceros_unicornis CAG-AGTTGAAGCTGCTTCTCTGAATTTGCAATTCAACATG-AAATTCACCACAGGGCCT Ceratotherium_simum CAG-AATTGAAGCTGCTTCTCTGAATTTGCAATTCAACATG-AAATTCACCACAGGGCCT Diceros_bicornis CAG-AATTGAAGCTGCTTCTCTGAATTTGCAATTCAACATG-AAATTCACCACAGGGCCT *** *********** ** *************** ** *********** * * Tapirus_terrestris GGCAAAAAGAGGGCTTTGACCTCTGTCTTTAGATTTACAGTCTAATGCTTACTCAGCCAT Equus_caballus GATAAGAAGAGGATTCCAACCCCTGTCTTTAGATTTACAGTCTAATGCTTACTCAGCCAT Coelodonta_antiquitatis GGCAAAAAGAGGGTTATAACCTCTGTCTTTAGATTTACAGTCTAATGCTTTCTCAGCCAT Dicerorhinus_sumatrensis GGTAAAAAGAGGGCTACAACCTCTGTCTTTAGATTTACAGTCTAATGCTTTCTCAGCCAT Rhinoceros_sondaicus GGCAAAAAGAGGGTTACGACCTCTGTCTTTAGATTTACAGTCTAATGCTTTCTCAGCCAC Rhinoceros_unicornis GGTAAAGAGAGGGCTGCAACCTCTGTCTTTAGATTTACAGTCTAATGCTTTCTCAGCCAC Ceratotherium_simum GGTAAAAAGAGGGCTACAACCTCTGTCTTTAGATTTACAGTCTAATGCTATCTCAGCCAT Diceros_bicornis GGCAAAAAGAGGGCTACAACCTCTGTCTTTAGATTTACAGTCTAATGCTATCTCAGCCAT * ** ***** * *** *************************** ******** Tapirus_terrestris TTTACCTATGTTCATCAACCGCTGATTATTTTCAACAAACCACAAAGATATTGGTACCCT Equus_caballus CTTACCTATGTTCATCAACCGCTGACTATTTTCAACTAACCACAAAGACATCGGCACTCT Coelodonta_antiquitatis TTTACCTATGTTCATTAACCGTTGACTATTTTCAACTAACCATAAAGATATCGGTACTCT Dicerorhinus_sumatrensis TTTACCTATGTTCATTAACCGCTGACTATTTTCAACTAACCACAAAGACATTGGCACCCT Rhinoceros_sondaicus TTTACCTATGTTCATTAACCGCTGACTATTTTCAACCAACCACAAAGACATTGGCACTCT Rhinoceros_unicornis TTTACCTATGTTCATTAACCGCTGATTATTTTCAACCAACCACAAAGACATTGGCACTCT Ceratotherium_simum TTTACCTATGTTCGTTAACCGCTGACTGTTTTCAACCAACCACAAGGACATTGGTACTCT Diceros_bicornis TTTACCTATGTTCATCAACCGCTGACTATTTTCAACCAACCACAAAGACATTGGCACTCT ************ * ***** *** * ******** ***** ** ** ** ** ** ** Tapirus_terrestris ATACTTGCTATTTGGCGCCTGAGCTGGAATAGTAGGCACAGCTCTAAGTCTCTTAATCCG Equus_caballus GTACCTCCTATTCGGCGCTTGAGCTGGAATAGTAGGAACTGCCCTAAGCCTCCTAATCCG Coelodonta_antiquitatis CTACCTATTATTTGGCGCATGAGCCGGAATAGTAGGGACTGCCTTAAGCCTTCTAATTCG Dicerorhinus_sumatrensis CTACCTACTGTTTGGCGCATGGGCCGGAATAGTAGGAACTGCCTTAAGCCTCCTAATTCG Rhinoceros_sondaicus ATATCTGCTATTTGGTGCCTGAGCTGGAATAGTAGGAACCGCCCTAAGCCTTCTAATTCG Rhinoceros_unicornis ATACCTGTTATTTGGCGCCTGAGCTGGAATAGTAGGAACCGCCCTAAGCCTTCTAATTCG Ceratotherium_simum CTACCTACTATTTGGCGCCTGAGCTGGAATGGTGGGGACCGCCCTGAGCCTTCTAATTCG Diceros_bicornis TTACCTATTATTTGGCGCTTGAGCTGGAATAGTGGGAACCGCCCTAAGCCTTCTAATTCG ** * * ** ** ** ** ** ***** ** ** ** ** * ** ** **** ** Tapirus_terrestris TGCCGAATTAGGTCAACCAGGAACTTTATTAGGAGATGACCAAATCTATAATGTAGTGGT Equus_caballus TGCTGAATTAGGCCAACCTGGGACCCTACTAGGAGATGATCAGATCTACAATGTCATTGT Coelodonta_antiquitatis CGCTGAACTAGGCCAGCCCGGAACCTTATTAGGAGATGACCAAATCTACAACGTAGTTGT Dicerorhinus_sumatrensis CGCTGAACTAGGTCAGCCTGGGACTTTATTAGGAGACGACCAGATCTACAACGTAGTAGT Rhinoceros_sondaicus CGCTGAATTAGGTCAGCCCGGGACCTTACTAGGAGATGATCAGATCTACAATGTAATTGT Rhinoceros_unicornis CGCCGAATTAGGTCAGCCCGGGACCTTACTAGGTGATGATCAAATCTACAATGTAGTCGT Ceratotherium_simum CGCTGAGCTAGGTCAACCTGGAACCTTGCTAGGAGACGACCAGATCTACAATGTAGTTGT Diceros_bicornis CGCTGAACTGGGTCAACCTGGAACCTTACTAGGAGACGACCAAATCTATAACGTAATTGT ** ** * ** ** ** ** ** * **** ** ** ** ***** ** ** * ** Tapirus_terrestris AACCGCTCATGCATTTGTAATAATTTTCTTCATAGTTATGCCAATCATAATCGGAGGATT Equus_caballus AACCGCCCATGCATTCGTAATAATTTTCTTTATGGTCATACCCATTATAATCGGAGGATT Coelodonta_antiquitatis AACTGCCCACGCATTCGTAATAATTTTCTTCATAGTAATGCCTATTATGATTGGAGGATT Dicerorhinus_sumatrensis AACTGCCCATGCATTTGTGATAATTTTCTTCATAGTAATACCTATTATGATCGGGGGGTT Rhinoceros_sondaicus GACTGCCCATGCATTTGTAATAATTTTCTTTATAGTTATGCCCATTATAATTGGAGGGTT Rhinoceros_unicornis GACTGCCCATGCATTCGTAATAATTTTCTTTATGGTTATGCCCATTATAATTGGAGGATT Ceratotherium_simum AACCGCCCATGCATTCGTAATAATTTTCTTTATAGTCATGCCTATCATAATCGGAGGATT Diceros_bicornis AACCGCTCATGCGTTCGTAATAATTTTCTTTATAGTTATGCCCATCATAATCGGAGGATT ** ** ** ** ** ** *********** ** ** ** ** ** ** ** ** ** ** Tapirus_terrestris TGGGAACTGATTAGTTCCATTAATGATTGGAGCACCCGACATAGCATTTCCACGAATAAA Equus_caballus CGGAAACTGATTAGTCCCCCTGATAATTGGAGCACCTGATATAGCTTTCCCCCGAATAAA Coelodonta_antiquitatis CGGAAACTGATTGGTTCCTCTAATAATTGGAGCACCCGACATAGCATTCCCCCGAATAAA Dicerorhinus_sumatrensis CGGGAACTGATTAGTCCCACTGATAATCGGAGCGCCCGACATAGCATTCCCCCGAATAAA Rhinoceros_sondaicus CGGAAACTGATTGGTCCCACTAATAATTGGAGCACCTGACATAGCATTCCCCCGAATAAA Rhinoceros_unicornis CGGAAACTGATTGGTCCCATTAATAATTGGAGCACCTGACATAGCATTTCCCCGAATAAA Ceratotherium_simum CGGAAATTGATTAGTCCCCTTAATAATTGGAGCACCCGACATAGCATTCCCACGAATAAA Diceros_bicornis CGGAAACTGGCTAGTCCCCTTAATAATTGGGGCACCCGACATAGCATTCCCGCGAATAAA ** ** ** * ** ** * ** ** ** ** ** ** ***** ** ** ******** Tapirus_terrestris CAACATAAGCTTCTGATTACTTCCCCCATCCTTTCTGCTCCTACTAGCATCTTCAATAAT Equus_caballus CAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACTTCTTCTCGCTTCCTCAATAAT Coelodonta_antiquitatis CAATATAAGCTTCTGACTTCTCCCACCATCATTCCTTCTTCTGCTCGCTTCATCAATAGT Dicerorhinus_sumatrensis CAATATAAGCTTCTGACTCCTCCCACCATCATTTCTTCTCCTACTTGCCTCATCAATAGT Rhinoceros_sondaicus CAATATAAGCTTCTGACTCTTATCACCATCATTTCTTCTTCTACTTGCATCATCAATGGT Rhinoceros_unicornis TAATATAAGCTTCTGACTCTTACCACCATCATTTCTTCTTCTGCTTGCATCATCAATAGT Ceratotherium_simum CAACATAAGCTTCTGACTTCTCCCACCATCATTTCTTCTTCTACTCGCTTCCTCGATAGT Diceros_bicornis CAATATAAGTTTCTGACTTCTCCCACCATCATTTCTTCTTCTACTCGCATCCTCGATAGT ** ***** ****** * * * ***** ** ** ** ** ** ** ** ** ** * Tapirus_terrestris TGAAGCTGGTGCAGGTACAGGCTGAACTGTCTATCCACCCCTAGCCGGTAACTTAGCACA Equus_caballus TGAAGCAGGTGCCGGAACAGGCTGAACCGTATATCCTCCTCTAGCTGGAAATCTGGCGCA Coelodonta_antiquitatis AGAAGCTGGCGCCGGAACAGGTTGAACCGTCTACCCGCCTCTAGCTGGCAATATAGCCCA Dicerorhinus_sumatrensis AGAAGCTGGTGCCGGAACAGGTTGAACCGTTTACCCTCCCCTAGCAGGCAATATAGCCCA Rhinoceros_sondaicus CGAAGCCGGTGCCGGAACAGGATGGACTGTCTACCCTCCCCTAGCTGGCAATCTAGCCCA Rhinoceros_unicornis TGAAGCCGGTGCCGGAACAGGCTGGACTGTCTACCCTCCCCTAGCCGGCAATCTAGCCCA Ceratotherium_simum CGAAGCCGGTGCCGGAACAGGCTGAACCGTTTATCCGCCATTAGCTGGTAATCTAGCCCA Diceros_bicornis CGAAGCCGGTGCCGGGACAGGCTGAACTGTTTATCCGCCCTTAGCTGGAAATCTAGCCCA ***** ** ** ** ***** ** ** ** ** ** ** **** ** ** * ** ** Tapirus_terrestris CGCAGGAGCTTCCGTTGACTTAACCATTTTCTCCCTCCACCTTGCAGGTGTATCCTCAAT Equus_caballus TGCAGGAGCCTCTGTTGACTTAACCATTTTCTCTCTCCACCTAGCTGGGGTGTCCTCGAT Coelodonta_antiquitatis TGCAGGAGCCTCTGTCGACCTAACCATCTTCTCCCTACACCTAGCAGGAGTGTCCTCAAT Dicerorhinus_sumatrensis CGCAGGAGCCTCCGTTGACCTGACCATCTTCTCCTTACACTTAGCAGGGGTGTCTTCGAT Rhinoceros_sondaicus TGCAGGAGCTTCTATTAACCTAACTATCTTTTCCCTGCACTTAGCAGGGGTGTCCTCAAT Rhinoceros_unicornis TGCAGGAGCTTCTGTTGACCTAACCATCTTTTCCCTACACCTAGCAGGGATCTCCTCAAT Ceratotherium_simum TGCAGGAGCCTCCGTTGACCTAACCATCTTCTCCCTACACCTAGCCGGAGTATCTTCAAT Diceros_bicornis CGCAGGAGCCTCTGTTGACCTAACCATCTTCTCCCTACACCTAGCCGGAGTATCCTCAAT ******** ** * ** * ** ** ** ** * *** * ** ** * ** ** ** Tapirus_terrestris TCTAGGCGCTATTAACTTTATTACTACAATTATTAATATAAAACCACCAGCTATATCACA Equus_caballus TTTAGGTGCCATCAACTTTATTACCACAATCATTAACATAAAACCACCAGCCCTATCCCA Coelodonta_antiquitatis CCTAGGTGCCATCAATTTTATCACTACAATTATTAATATAAAACCGCCAGCAATATCCCA Dicerorhinus_sumatrensis TCTAGGTGCCATCAACTTTATTACTACAATTATTAATATAAAACCACCAGCAATATCCCA Rhinoceros_sondaicus TTTAGGGGCCATTAACTTTATCACTACAATTATCAATATAAAACCACCGGCCATGTCCCA Rhinoceros_unicornis TTTAGGGGCCATCAACTTTATCACTACGATTATTAATATAAAACCACCAGCCATATCCCA Ceratotherium_simum TCTAGGTGCCATCAATTTTATTACTACAATTATCAACATAAAACCACCAGCCATATCCCA Diceros_bicornis TCTAGGTGCCATTAATTTTATTACCACAATTATTAATATAAAACCACCAGCCATATCCCA **** ** ** ** ***** ** ** ** ** ** ******** ** ** * ** ** Tapirus_terrestris GTACCAAACACCTTTATTTGTTTGATCAGTCCTAATTACAGCAGTATTACTATTACTAGC Equus_caballus ATATCAAACCCCCCTATTCGTTTGATCTGTCCTTATTACGGCAGTACTCCTTCTCCTAGC Coelodonta_antiquitatis ATATCAAACGCCTCTATTCGTATGATCTGTCCTAATCACAGCAGTACTTCTACTATTGGC Dicerorhinus_sumatrensis ATATCAAACACCCTTATTCGTATGATCCGTCCTAATCACAGCAGTGCTCCTACTACTAGC Rhinoceros_sondaicus ATACCAAACACCTCTATTCGTATGATCCGTCCTAATTACAGCAGTGCTCCTGTTATTAGC Rhinoceros_unicornis GTACCAGACACCTCTATTCGTATGATCCGTCCTAATTACAGCAGTGCTACTATTATTAGC Ceratotherium_simum ATATCAAACGCCTCTGTTCGTGTGATCCGTTTTAATCACAGCTGTACTCCTATTACTAGC Diceros_bicornis ATATCAAACGCCCCTATTCGTGTGATCCGTTTTAATTACAGCTGTACTCCTATTACTAGC ** ** ** ** * ** ** ***** ** * ** ** ** ** * ** * * ** Tapirus_terrestris ACTTCCAGTTCTAGCAGCAGGGATTACCATACTACTAACAGACCGTAACCTAAATACTAC Equus_caballus CCTCCCGGTCCTAGCAGCAGGCATTACCATGCTTCTCACAGACCGTAACCTGAACACTAC Coelodonta_antiquitatis ACTCCCAGTCCTAGCAGCAGGAATTACCATATTACTAACAGACCGTAATCTAAATACTAC Dicerorhinus_sumatrensis GCTCCCAGTTTTAGCAGCAGGGATTACCATACTACTAACAGACCGTAATCTAAACACTAC Rhinoceros_sondaicus ACTCCCAGTCCTAGCAGCGGGAATTACTATATTACTAACAGACCGAAACCTAAACACCAC Rhinoceros_unicornis ACTCCCAGTCCTAGCAGCAGGAATTACTATATTACTAACAGACCGTAACCTAAACACCAC Ceratotherium_simum TCTTCCAGTCTTAGCAGCAGGAATTACCATGCTACTAACAGACCGTAATCTGAACACTAC Diceros_bicornis ACTTCCAGTCTTAGCAGCAGGAATTACCATGCTACTAACAGACCGTAACCTGAACACTAC ** ** ** ******* ** ***** ** * ** ******** ** ** ** ** ** Tapirus_terrestris TTTCTTTGACCCTGCAGGAGGAGGGGATCCTATTCTATATCAACATCTATTTTGATTCTT Equus_caballus TTTCTTCGACCCCGCAGGAGGAGGGGATCCAATCCTTTATCAACACCTATTCTGATTCTT Coelodonta_antiquitatis CTTTTTCGACCCAGCAGGGGGAGGAGACCCCATTTTATACCAACACCTCTTCTGATTCTT Dicerorhinus_sumatrensis CTTTTTCGACCCAGCAGGAGGAGGCGACCCCATTTTATACCAACACCTCTTCTGATTCTT Rhinoceros_sondaicus CTTCTTCGACCCAGCGGGGGGAGGTGACCCTATCCTATACCAACATCTCTTCTGATTCTT Rhinoceros_unicornis CTTCTTCGACCCGGCAGGGGGAGGTGACCCTATCCTATACCAACATCTCTTCTGATTCTT Ceratotherium_simum TTTTTTCGACCCAGCAGGGGGAGGCGACCCCATCTTATACCAGCACCTCTTTTGATTTTT Diceros_bicornis TTTCTTCGACCCAGCAGGGGGAGGCGACCCAATCTTATACCAACACCTCTTTTGATTTTT ** ** ***** ** ** ***** ** ** ** * ** ** ** ** ** ***** ** Tapirus_terrestris TGGACATCCTGAAGTTTATATCCTCATTTTACCAGGCTTTGGAATAATCTCACATATTGT Equus_caballus CGGACACCCCGAAGTCTATATTCTTATCCTACCAGGCTTCGGTATAATCTCACACATCGT Coelodonta_antiquitatis CGGCCACCCCGAAGTCTATATTCTGATTCTTCCAGGCTTTGGAATAATTTCACATATTGT Dicerorhinus_sumatrensis CGGCCACCCCGAAGTCTACATTCTGATTCTCCCAGGCTTCGGAATAATCTCACACATTGT Rhinoceros_sondaicus TGGCCACCCCGAAGTATACATCCTGATCCTACCAGGCTTTGGGATAATCTCACATATTGT Rhinoceros_unicornis TGGTCACCCCGAAGTCTACATTCTGATCCTACCAGGCTTTGGGATAATCTCACACATTGT Ceratotherium_simum CGGCCATCCTGAAGTCTATATTCTAATTCTACCAGGCTTCGGAATAATCTCACATATTGT Diceros_bicornis CGGCCACCCTGAAGTCTATATTCTAATCCTACCAGGCTTTGGAATAATCTCACATATTGT ** ** ** ***** ** ** ** ** * ******** ** ***** ***** ** ** Tapirus_terrestris CACATATTATTCAGGTAAAAAAGAACCATTTGGTTATATAGGAATAGTATGAGCTATAAT Equus_caballus CACATACTACTCAGGTAAAAAGGAACCTTTTGGCTACATGGGTATAGTGTGAGCTATAAT Coelodonta_antiquitatis CACATACTATTCAGGAAAAAAAGAACCTTTTGGTTACATAGGAATAGTCTGAGCCATGAT Dicerorhinus_sumatrensis CACGTACTACTCAGGAAAAAAAGAACCTTTTGGTTATATAGGAATAGTTTGAGCTATGAT Rhinoceros_sondaicus TACATACTATTCAGGAAAAAAAGAACCATTTGGTTATATAGGGATGGTATGAGCTATGAT Rhinoceros_unicornis TACATATTACTCAGGAAAAAAAGAGCCATTTGGTTATATAGGAATAGTATGAGCTATAAT Ceratotherium_simum TACATATTACTCAGGGAAAAAAGAACCCTTCGGTTACATAGGAATAGTCTGAGCCATAAT Diceros_bicornis TACATATTACTCAGGAAAAAAAGAACCTTTCGGCTATATAGGAATAGTCTGAGCTATAAT ** ** ** ***** ***** ** ** ** ** ** ** ** ** ** ***** ** ** Tapirus_terrestris ATCCATCGGCTTCTTAGGCTTTATCGTATGAGCTCACCATATGTTTACAGTAGGCATAGA Equus_caballus ATCCATTGGCTTTCTAGGCTTCATCGTATGGGCTCACCACATGTTTACAGTAGGGATAGA Coelodonta_antiquitatis ATCTATCGGATTCCTAGGATTTATCGTATGAGCCCACCACATGTTTACAGTTGGCATGGA Dicerorhinus_sumatrensis ATCCATCGGATTCCTAGGATTCATCGTATGGGCCCACCACATGTTTACAGTTGGCATGGA Rhinoceros_sondaicus ATCCATCGGATTCTTAGGATTCATTGTATGAGCCCACCACATATTTACAATCGGCATAGA Rhinoceros_unicornis ATCCATCGGATTCTTAGGGTTCATTGTATGAGCCCACCACATATTTACAGTTGGAATAGA Ceratotherium_simum ATCTATTGGATTCCTAGGGTTCATTGTATGAGCTCACCACATATTTACTGTTGGCATGGA Diceros_bicornis ATCTATCGGATTCCTAGGATTCATTGTATGAGCCCACCACATATTTACTGTTGGCATGGA *** ** ** ** **** ** ** ***** ** ***** ** ***** * ** ** ** Tapirus_terrestris TGTTGATACACGAGCATACTTCACATCAGCTACTATAATTATTGCTATCCCCACTGGTGT Equus_caballus CGTTGACACACGAGCATACTTCACATCAGCTACCATAATCATCGCTATCCCTACTGGTGT Coelodonta_antiquitatis CGTTGACACACGAGCATACTTTACATCCGCCACTATAATTATTGCTATTCCCACAGGCGT Dicerorhinus_sumatrensis CGTTGACACACGAGCATACTTCACGTCCGCCACTATAATTATTGCTATCCCCACAGGAGT Rhinoceros_sondaicus CGTTGACACACGAGCATACTTTACATCTGCCACTATAATTATTGCTATTCCCACAGGCGT Rhinoceros_unicornis CGTTGACACACGAGCATACTTTACATCTGCCACTATAATTATTGCTATTCCCACAGGCGT Ceratotherium_simum CGTTGACACACGAGCATACTTCACATCCGCCACTATGATCATCGCTATTCCCACTGGCGT Diceros_bicornis CGTTGACACACGAGCATACTTCACATCCGCCACTATAATCATCGCTATTCCCACTGGCGT ***** ************** ** ** ** ** ** ** ** ***** ** ** ** ** Tapirus_terrestris AAAAGTGTTTAGTTGACTAGCGACCCTCCACGGAGGGAACATCAAATGATCCCCTGCCCT Equus_caballus AAAAGTATTCAGCTGACTAGCCACCCTGCACGGAGGAAATATCAAATGATCTCCAGCTAT Coelodonta_antiquitatis AAAAGTATTCAGCTGACTAGCCACCCTTCACGGAGGAAATATTAAATGATCGCCGGCTAT Dicerorhinus_sumatrensis AAAAGTATTCAGCTGATTAGCAACCCTTCACGGAGGAAACATTAAATGATCCCCAGCTAT Rhinoceros_sondaicus AAAAGTATTCAGCTGGTTAGCCACCCTTCATGGAGGGAATATCAAATGATCACCAGCCAT Rhinoceros_unicornis AAAAGTATTTAGCTGATTAGCCACCCTTCACGGAGGGAATATCAAATGATCGCCAGCCAT Ceratotherium_simum AAAAGTATTCAGTTGATTAGCTACCCTTCATGGGGGAAATATCAAATGATCGCCGGCCAT Diceros_bicornis AAAAGTATTCAGCTGATTAGCTACCCTTCATGGAGGAAACATCAAATGATCACCAGCTAT ****** ** ** ** **** ***** ** ** ** ** ** ******** ** ** * Tapirus_terrestris ATTATGAGCCTTAGGTTTTATTTTTTTATTCACAGTAGGAGGCCTGACAGGAATCGTACT Equus_caballus ACTCTGAGCTCTAGGCTTCATCTTCTTATTCACAGTAGGAGGTCTAACAGGAATCGTCCT Coelodonta_antiquitatis ACTATGAGCCCTGGGTTTTATCTTCTTATTCACAGTAGGAGGTCTAACAGGGATCGTCCT Dicerorhinus_sumatrensis ACTATGAGCCCTGGGCTTCATCTTCCTATTTACAGTAGGGGGATTAACAGGAATCGTCCT Rhinoceros_sondaicus GCTATGAGCCCTAGGCTTTATCTTCCTATTCACAGTAGGAGGTCTAACTGGAATTGTTCT Rhinoceros_unicornis GCTATGAGCCCTAGGCTTTATCTTCCTATTCACAGTAGGAGGCTTAACTGGAATTGTCCT Ceratotherium_simum ACTATGAGCCCTGGGCTTTATTTTCCTGTTCACGGTGGGAGGCTTAACAGGGATTGTCTT Diceros_bicornis ACTATGGGCCCTAGGCTTTATTTTCTTATTCACAGTGGGAGGCTTAACAGGGATTGTTTT * ** ** * ** ** ** ** * ** ** ** ** ** * ** ** ** ** * Tapirus_terrestris AGCCAATTCATCCCTAGATATCGTACTCCACGACACATACTATGTGGTAGCTCACTTCCA Equus_caballus AGCTAACTCATCCCTAGATATTGTTCTCCACGATACTTATTATGTAGTAGCACATTTCCA Coelodonta_antiquitatis GGCCAACTCATCCCTAGACATTGTACTTCACGACACATACTATGTAGTAGCACATTTCCA Dicerorhinus_sumatrensis GGCCAACTCATCCCTGGATATCGTACTCCACGACACATACTATGTAGTAGCGCACTTCCA Rhinoceros_sondaicus AGCTAATTCGTCGCTAGATATTGTACTTCACGATACATACTATGTAGTAGCACACTTCCA Rhinoceros_unicornis AGCTAACTCGTCACTAGATATTGTACTTCACGACACATACTATGTAGTAGCACACTTCCA Ceratotherium_simum AGCCAACTCATCATTAGACATTGTACTTCACGACACATACTACGTAGTAGCACATTTCCA Diceros_bicornis AGCCAACTCATCATTAGATATCGTACTTCACGACACATACTACGTAGTAGCACATTTCCA ** ** ** ** * ** ** ** ** ***** ** ** ** ** ***** ** ***** Tapirus_terrestris CTATGTTTTATCCATAGGAGCAGTTTTCGCTATTATAGGAGGATTTGTTCACTGATTTCC Equus_caballus TTATGTCCTGTCTATAGGAGCAGTCTTCGCCATTATGGGGGGATTTGTACACTGATTCCC Coelodonta_antiquitatis TTATGTTCTATCCATAGGAGCCGTCTTTGCTATTATAGGAGGGTTCGTCCACTGATTCCC Dicerorhinus_sumatrensis TTATGTTTTATCCATAGGAGCTGTCTTCGCTATCATAGGAGGATTCGTCCACTGATTCCC Rhinoceros_sondaicus CTATGTATTATCTATAGGAGCAGTTTTCGCTATCATAGGAGGGTTCGTCCACTGATTTCC Rhinoceros_unicornis CTATGTATTATCTATGGGAGCAGTATTTGCTATCATAGGAGGATTCGTCCACTGATTCCC Ceratotherium_simum CTATGTTTTATCTATAGGAGCAGTTTTTGCTATCATAGGAGGATTCGTCCACTGATTCCC Diceros_bicornis CTATGTTTTATCTATAGGAGCAGTTTTTGCTATCATAGGAGGGTTCGTCCACTGATTCCC ***** * ** ** ***** ** ** ** ** ** ** ** ** ** ******** ** Tapirus_terrestris ATTATTCTCGGGATATACACTCAATCAAACCTGAGCAAAAATTCACTTCACAATCATATT Equus_caballus TCTATTCTCAGGATACACACTCAACCAAACCTGAGCAAAAATCCACTTTACAATTATATT Coelodonta_antiquitatis TTTATTCTCAGGATACACACTTAACCAGACCTGAGCAAAGATTCACTTTACAATTATATT Dicerorhinus_sumatrensis CTTATTCTCAGGGTATATACTCAACCAGACCTGAGCAAAAATCCACTTTACTATTATATT Rhinoceros_sondaicus CTTATTCTCAGGATATTCACTCAACCAAACCTGAGCAAAAATCCACTTTACAATCATGTT Rhinoceros_unicornis CTTATTCTCAGGATACACACTCAACCAAACCTGAGCAAAAATTCACTTTACAATCATATT Ceratotherium_simum CCTATTCTCGGGATACACACTCAACCAAACTTGAGCAAAAATCCACTTCACAATTATATT Diceros_bicornis CCTATTCTCAGGATACACACTCAACCAAACCTGAGCAAAAATCCACTTCATAATTATATT ******* ** ** *** ** ** ** ******** ** ***** * ** ** ** Tapirus_terrestris TGTAGGTGTAAATATAACATTCTTCCCTCAACATTTTCTTGGCTTAGCAGGAATGCCACG Equus_caballus CGTAGGGGTAAATATAACCTTCTTCCCACAACATTTCCTTGGCCTCTCAGGAATGCCACG Coelodonta_antiquitatis CGTAGGAGTAAACATAACCTTTTTCCCACAGCACTTTCTAGGTCTCTCAGGAATACCACG Dicerorhinus_sumatrensis CGTAGGGGTAAACATAACCTTTTTCCCGCAACACTTTCTTGGTCTCTCAGGAATACCACG Rhinoceros_sondaicus CGTAGGGGTCAATATAACTTTCTTCCCACAGCACTTTCTTGGCTTATCAGGAATGCCTCG Rhinoceros_unicornis CGTGGGGGTCAATATAACCTTCTTCCCACAACATTTTCTTGGTCTATCAGGAATACCTCG Ceratotherium_simum CGTAGGGGTGAATATGACCTTCTTTCCACAACACTTTCTTGGTCTCTCAGGAATGCCACG Diceros_bicornis CGTAGGAGTGAATATAACCTTCTTTCCACAGCACTTCCTTGGTCTCTCAGGGATGCCACG ** ** ** ** ** ** ** ** ** ** ** ** ** ** * **** ** ** ** Tapirus_terrestris ACGCTATTCTGACTACCCAGATGCATACACAACATGAAACACTATTTCATCTATAGGATC Equus_caballus ACGCTATTCTGATTATCCAGACGCATATACAACATGAAATACCATCTCATCCATAGGATC Coelodonta_antiquitatis TCGCTATTCAGACTACCCAGATGCATATACGACATGAAATACTATCTCATCTATAGGATC Dicerorhinus_sumatrensis CCGTTATTCAGACTACCCAGACGCGTACACAACATGAAACACCATCTCATCAATAGGATC Rhinoceros_sondaicus ACGTTACTCTGATTATCCAGATGCATACACAACATGAAACACCATTTCATCTATAGGATC Rhinoceros_unicornis CCGTTACTCAGATTACCCAGATGCATACACAACATGAAATACCATTTCATCTATGGGATC Ceratotherium_simum TCGCTACTCAGACTACCCAGATGCATACACAACATGAAACACTATCTCATCTATAGGATC Diceros_bicornis TCGCTACTCAGACTACCCAGATGCATACACAACATGAAACACTATCTCCTCTATAGGGTC ** ** ** ** ** ***** ** ** ** ******** ** ** ** ** ** ** ** Tapirus_terrestris CTTCATCTCACTCACAGCAGTTATACTAATAGCATTTATAGTATGAGAAGCATTCGCATC Equus_caballus TTTTATCTCACTTACAGCAGTGATACTAATAATTTTCATAATTTGAGAAGCGTTCGCATC Coelodonta_antiquitatis CTTCATTTCACTAACAGCAGTTATACTCATAGTCTTCATAGTCTGAGAAGCATTCGCATC Dicerorhinus_sumatrensis CTTCATCTCACTCACAGCAGTTATACTCATAGTCTTCATAGTCTGAGAAGCATTCGCATC Rhinoceros_sondaicus CTTCATCTCACTCACAGCAGTAATACTTATAATGTTCATAGTTTGAGAAGCATTCGCATC Rhinoceros_unicornis CCTCATCTCGCTCACAGCAGTAATACTCATAGTGTTCATAGTTTGAGAAGCATTTGCATC Ceratotherium_simum CTTTATCTCGCTTACAGCGGTAATACTAATAGTCTTCATAATTTGAGAAGCATTCGCATC Diceros_bicornis CTTCATCTCGCTTACAGCAGTAATACTTATAGTCTTTATAATTTGAGAAGCATTCGCATC * ** ** ** ***** ** ***** *** ** *** * ******** ** ***** Tapirus_terrestris CAAACGAGAAGTACTAGCAGTAGAACTAACTACAACCAACCTCGAATGACTAAATGGGTG Equus_caballus CAAACGAGAAGTGTCTACAGTAGAATTAACCTCAACTAATCTGGAATGACTACACGGATG Coelodonta_antiquitatis CAAACGAGAAGTATCAACAGTAGAACTAACCACCTCCAATCTTGAATGGCTGCACGGATG Dicerorhinus_sumatrensis CAAACGAGAGGTGTCAACAGTAGAGTTAACTACCTCTAACCTCGAATGACTACATGGATG Rhinoceros_sondaicus CAAACGAGAAGTATCAACAGTAGAACTGACCTCTTCTAACCTAGAATGACTGCACGGATG Rhinoceros_unicornis CAAACGAGAAGTCTCAACAGTAGAACTAACCTCTTTTAACCTAGAATGACTGCATGGATG Ceratotherium_simum CAAGCGAGAGGTATCAACAGTAGAACTAACCACCTCCAACCTTGAGTGACTACATGGATG Diceros_bicornis TAAACGAGAGGTATCAACAGTAGAACTAACCACCTCTAACCTTGAATGGCTACACGGATG ** ***** ** ******* * ** * ** ** ** ** ** * ** ** Tapirus_terrestris CCCTCCACCTTACCACACATTTGAAGAACCTGTTTATATTAACCTTAAATAAGAAAGGAA Equus_caballus CCCCCCACCATACCACACATTTGAAGAACCCACCTACGTAAACCTAAAATAAGAAAGGAA Coelodonta_antiquitatis TCCACCTCCATATCATACATTTGAAGAACCCGTTTACGTAAACCTAAAATAAGAGAGGAA Dicerorhinus_sumatrensis CCCTCCCCCATACCATACATTCGAAGAGCCTGTTTACGTAAACCTAAAATAAGAGAGGAA Rhinoceros_sondaicus CCCTCCTCCGTATCATACATTTGAAGAGCCTGTGTATGTAAATCTAAAATAAGAAAGGAA Rhinoceros_unicornis CCCCCCTCCATATCATACATTCGAAGAGCCTGTGTATGTGAATTTAAAGTAAGAAAGGAA Ceratotherium_simum CCCTCCCCCATATCACACATTCGAAGAACCTGTTTACGTAAATCTAAAATAAGAAAGGAA Diceros_bicornis CCCTCCCCCATATCATACATTCGAAGAGCCTGTCTACGTAAACCTAAAATAAGAAAGGAA ** ** ** ** ** ***** ***** ** ** * ** * ** ***** ***** Tapirus_terrestris GGAATCGAACCCCCTCTGACTGGTTTCAAGCCAATATCATAACCATTATGTCTTTCT--- Equus_caballus GGAATCGAACCCCCTCTAACTGGTTTCAAGCCAATATCATAACCACTATGTCTTTCTC-- Coelodonta_antiquitatis GGAGTCGAACCTTCTTTAATTGGTTTCAAGCCAATATCATAGCCCCTATGTCTCTCT--- Dicerorhinus_sumatrensis GGAATCGAACCTCCTTTAATTGGTTTCAAGCCAATATCATAACCTCTATGTCTCTCT--- Rhinoceros_sondaicus GGAATCGAACCCCCTCTGACTGGTTTCAAGCCAATATCATAACCTCTATGTCTTTCT--- Rhinoceros_unicornis GGAATCGAACCCCCTCTGACTGGTTTCAAGCCAATATCATAACCTCTATGTCTTTCTCTC Ceratotherium_simum GGAATCGAACCCCCTCTAACTGGTTTCAAGCCAATATCATAGCCTTTATGTCTTTCTCTC Diceros_bicornis GGAATTGAACCCCCTCTAACTGGTTTCAAGCCAATATCATAACCTCTATGTCTTTCTCTC *** * ***** ** * * ********************* ** ******* *** Tapirus_terrestris ---CAAAATACGAGATATTAGTAAAACTTACATAACTTTGTCAAAGTTAAATTATAGGTT Equus_caballus ---CATCAATTGAGGTATTAGTAAAAATTACATGACTTTGTCAAAGTTAAATTATAGGTT Coelodonta_antiquitatis ---CAATAAATGAGGTATTAGTAAAAATTACATAACTTTGTCGAAGTTAAGTTATAGGCT Dicerorhinus_sumatrensis ---CAATAAACGAGATATTAGTAAAAATTACATAACTTTGTCAAAGTTAAGTTATAGGCT Rhinoceros_sondaicus ---CAATAAGTGAGATATTAGTAAAAATTACATAACTTTGTCAAAGTTAAGTTATAGGCT Rhinoceros_unicornis T--CAATGAGTGAGATATTAGTAAAATTTACATAACTTTGTCAAAGTTGAGTTATAGGTT Ceratotherium_simum T--CAATAAGTGAGATATTAGTAAAAATTACATAACTTTGTCAAAGTTAAATTATAGGCT Diceros_bicornis TCCCAATAAATGAGATATTAGTAAAAATTACATAACTTTGTCAAAGTTAAGTTATAGATT ** *** *********** ****** ******** ***** * ****** * Tapirus_terrestris AAAACCCTATATATCTCCATGGCATATCCCTTCCAACTAGGATTTCAAGATGCAACATCT Equus_caballus AAACCCCTATATACCTCTATGGCCTACCCCTTCCAACTAGGATTCCAAGACGCAACATCC Coelodonta_antiquitatis AAAACCCTATATACCTCCATGGCTTATCCCTTCCAACTAGGATTCCAAGATGCAACATCC Dicerorhinus_sumatrensis AAATCCCTGTATATCTCCATGGCTTACCCCTTCCAACTAGGATTCCAAGATGCTACATCC Rhinoceros_sondaicus AA-CCCCTATATATCTCCATGGCTTATCCACTTCAACTAGGATTTCAAGATGCAACATCC Rhinoceros_unicornis AAACCCCTATATATCTCCATGGCTTATCCACTTCAACTAGGATTTCAAGATGCAACATCC Ceratotherium_simum AAACCCCTATATATCTCTATGGCTTACCCATTCCAACTAGGATTTCAAGACGCAACATCC Diceros_bicornis AAGCCTCTATATATCTCTATGGCCTACCCGCTCCAACTAGGATTTCAAGACGCAACATCC ** * ** **** *** ***** ** ** * *********** ***** ** ***** Tapirus_terrestris CCTATTATAGAAGAACTTCTCCATTTCCACGACCATACACTAATAATCGTATTCCTAATT Equus_caballus CCTATTATAGAAGAACTCCTACACTTCCACGACCACACACTAATAATCGTATTCCTAATT Coelodonta_antiquitatis CCTATCATAGAAGAACTGCTCCACTTTCATGATCACACACTAATAATCGTATTCTTAATC Dicerorhinus_sumatrensis CCTATTATAGAAGAACTACTCCACTTCCACGATCATACACTAATAATCGTATTTTTAATT Rhinoceros_sondaicus CCCATCATGGAAGAATTACTACACTTCCATGACCACACACTGATAATTGTATTTTTAATT Rhinoceros_unicornis CCTATTATAGAAGAATTACTCCATTTCCATGACCATACACTGATAATCGTATTTTTAATT Ceratotherium_simum CCTATCATAGAAGAACTACTTCACTTCCACGACCACACACTAATAATTGTATTCTTAATT Diceros_bicornis CCTATCATAGAAGAACTACTTCACTTTCACGACCACACATTAATGATTGTATTCCTAATT ** ** ** ****** * ** ** ** ** ** ** *** * ** ** ***** **** Tapirus_terrestris AGCTCTTTAGTATTATATATTATTTCATTAATACTTACAACCAAACTAACCCACACAAGT Equus_caballus AGCTCTCTAGTATTATATATTATCTCATCAATACTAACAACTAAATTAACCCATACCAGC Coelodonta_antiquitatis AGCTCTCTAGTATTATATATCATCTCACTTATACTAACAACTAAGCTAACACACACAAGC Dicerorhinus_sumatrensis AGCTCTCTAGTACTGTATATTATTTCACTCATGCTAACAACCAAACTAACACACACAAGC Rhinoceros_sondaicus AGCTCCCTAGTACTATACATTATTTCACTCATGCTAACAACCAAACTAACACACACAAGC Rhinoceros_unicornis AGCTCCCTAGTGCTGTATATTATTTCACTCATGCTAACAACCAAACTAACACACACAAGC Ceratotherium_simum AGTTCTCTAGTGTTGTATATTATTTCACTCATACTAACAACCAAACTAACACACACAAGC Diceros_bicornis AGTTCTTTAGTATTATACATTATTTCACTCATGCTAACAACTAAACTAACACACACAAGC ** ** **** * ** ** ** *** ** ** ***** ** **** ** ** ** Tapirus_terrestris ACTATAGATGCTCAAGAAGTAGAAACCATTTGAACTATCCTACCAGCCATCATTTTAATC Equus_caballus ACCATAGATGCTCAAGAAGTAGAGACAATTTGAACGATTTTACCAGCCATCATCCTTATT Coelodonta_antiquitatis ACTATAGACGCCCAAGAAGTAGAGACCATCTGAACTATTCTACCAGCTATTATTCTTATC Dicerorhinus_sumatrensis ACTATAGATGCCCAAGAAGTAGAGACCATCTGAACCATCCTGCCAGCTATTATCCTAATT Rhinoceros_sondaicus ACTATAGACGCTCAAGAAGTAGAAACCATCTGAACGATTCTACCAGCTATCATCCTAATT Rhinoceros_unicornis ACTATAGACGCTCAAGAAGTAGAGACCATCTGAACGATTTTACCAGCTATTATCCTAATT Ceratotherium_simum ACTATAGACGCACAAGAAGTAGAGACTATTTGAACCATCCTGCCAGCCATTATCCTAATT Diceros_bicornis ACTATAGACGCACAAGAAGTAGAGACTATTTGAACCATCCTACCGGCTATTATCCTAATC ** ***** ** *********** ** ** ***** ** * ** ** ** ** * ** Tapirus_terrestris TTAATTGCCCTACCATCTCTACGAATTCTTTATATAATAGACGAAATTAACAACCCTTCT Equus_caballus CTAATCGCCCTCCCATCCCTACGAATTCTATATATAATAGATGAAATCAATAATCCGTCC Coelodonta_antiquitatis CTAATTGCCCTTCCATCACTACGAATCCTTTATATAATAGATGAAATCAACAACCCTTCC Dicerorhinus_sumatrensis CTAATCGCCCTCCCATCACTACGAATCCTCTATATAATAGATGAAATTAACAACCCCTCC Rhinoceros_sondaicus TTAATTGCCCTCCCATCATTACGAATCCTCTATATAATAGATAAGATTAATAACCCTTCC Rhinoceros_unicornis TTAATTGCTCTCCCATCGCTACGAATCCTCTATATAATAGATGAGATTAATAATCCTTCC Ceratotherium_simum CTAATTGCCCTCCCATCGCTACGAATCCTTTATATAATAGATGAGATTAATAACCCCTCC Diceros_bicornis CTAATTGCCCTCCCATCGCTACGAATCCTCTATATAATAGATGAGATCAATAACCCCTCC **** ** ** ***** ******* ** *********** * ** ** ** ** ** Tapirus_terrestris TTAACCGTCAAAACTATAGGACACCAGTGATACTGAAGCTATGAATATACAGATTATGAA Equus_caballus CTCACAGTCAAAACAATAGGCCACCAATGATACTGAAGCTACGAGTATACCGATTACGAA Coelodonta_antiquitatis TTAACTGTCAAGACTATAGGTCACCAATGATACTGAAGCTACGAATACACAGACTATGAA Dicerorhinus_sumatrensis TTAACCGTTAAGACCATGGGTCATCAATGGTATTGAAGCTACGAATACACGGACTATGAA Rhinoceros_sondaicus TTAACCATCAAAACCATAGGTCATCAATGATACTGAAGCTACGAATATACAGACTATGAA Rhinoceros_unicornis TTAACCATCAAAACCATAGGCCATCAGTGATACTGAAGCTACGAATATACAGATTATGAA Ceratotherium_simum CTAACCGTTAAAACCATAGGACATCAATGATACTGAAGCTATGAATATACAGACTACGAA Diceros_bicornis CTAACCGTTAAAACTATAGGGCATCAATGATACTGAAGTTATGAATACACAGACTACGAA * ** * ** ** ** ** ** ** ** ** ***** ** ** ** ** ** ** *** Tapirus_terrestris GACCTAAACTTCGATTCCTACATAGTACCTACATCAGATCTAAAACCCGGAGAGTTACGA Equus_caballus GACTTGACCTTTGACTCCTACATGATCCCCACATCAGACCTAAAACCAGGAGAATTACGT Coelodonta_antiquitatis GACCTAACCTTTGACTCCTACATGATCCCCACATCAGACCTAAAACCAGGTGAATTACGG Dicerorhinus_sumatrensis GACCTGACCTTTGACTCCTACATAATCCCTACACCAGACCTGAAGCCAGGAGAGCTACGA Rhinoceros_sondaicus GACCTAACCTTTGACTCCTACATAATCCCCACATCAGATCTAAAACCAGGAGAACTGCGA Rhinoceros_unicornis GACCTAACCTTTGACTCCTACATAATTCCCACATCAGATCTAAAACCAGGAGAACTGCGA Ceratotherium_simum GACCTAACCTTTGACTCCTACATAATCCCCACATCAGACCTAAAACCAGGAGAGTTGCGA Diceros_bicornis GACCTAACCTTTGACTCCTACATAATCCCTACATCAGACCTAAAACCAGGAGAGCTACGA *** * * *** ** ******** * ** *** **** ** ** ** ** ** * ** Tapirus_terrestris CTACTTGAAGTTGACAACCGAGTAGTTTTATTTATAGAAATAACAATTCGAATACTCATT Equus_caballus CTTCTAGAAGTCGACAATCGAGTGGTTCTCCCCATAGAAATAACCATCCGAATGCTAATT Coelodonta_antiquitatis CTTCTAGAAGTAGATAACCGAGTAGTGTTACCCATAGAAATAACAGTTCGAATACTAATC Dicerorhinus_sumatrensis CTTTTAGAAGTAGACAACCGAGTAGTATTGCCCATAGAAGTAACAATTCGAATATTAATC Rhinoceros_sondaicus CTTCTAGAAGTCGACAACCGAGTAGTATTGCCCATAGAAATAACGGTTCGAATATTAATC Rhinoceros_unicornis CTTCTAGAAGTCGACAACCGAGTAGTATTACCCATAGAAATAACGATTCGAATGCTAATC Ceratotherium_simum CTTCTAGAAGTCGATAACCGAGTAGTGCTACCTATAGAAATAACAATCCGAATGCTAATC Diceros_bicornis CTTCTAGAAGTCGACAACCGAGTAGTACTACCCATAGAAATAACAATCCGAATACTAATC ** * ***** ** ** ***** ** * ****** **** * ***** * ** Tapirus_terrestris TCATCCGAAGATGTCCTGCACTCATGAGCCGTACCCTCCTTAGGCCTAAAAACTGACGCT Equus_caballus TCATCCGAAGACGTCCTACACTCATGAGCTGTGCCCTCCCTAGGCCTAAAAACAGACGCT Coelodonta_antiquitatis TCATCTGAAGACGTCCTTCATTCATGAGCCGTTCCCTCTTTAGGCCTAAAAACAGATGCA Dicerorhinus_sumatrensis TCGTCCGAAGACGTCCTTCACTCATGAGCCGTCCCTTCTTTAGGCCTAAAAACAGATGCA Rhinoceros_sondaicus TCGTCCGAAGACGTTCTCCACTCATGAGCCGTCCCCTCTTTAGGCCTAAAAACAGATGCA Rhinoceros_unicornis TCATCCGAAGACGTTCTCCACTCATGAGCCGTCCCCTCTTTGGGCTTAAAAACAGATGCG Ceratotherium_simum TCATCCGAAGATGTTCTTCACTCATGAGCTGTCCCTTCTTTAGGCCTAAAAACGGATGCA Diceros_bicornis TCATCCGAAGACGTTCTTCATTCATGAGCCATCCCCTCCTTAGGCCTAAAAACGGACGCA ** ** ***** ** ** ** ******** * ** ** * *** ******* ** ** Tapirus_terrestris ATTCCAGGACGCCTAAACCAAACGACTTTAGTAGCTATACGACCGGGATTATATTACGGA Equus_caballus ATCCCTGGGCGCCTAAATCAGACAACTCTCGTGGCCTCTCGACCAGGACTTTACTACGGT Coelodonta_antiquitatis ATCCCAGGGCGCTTGAACCAAACAACCCTAGTATCCACACGACCAGGATTATACTACGGA Dicerorhinus_sumatrensis ATCCCAGGACGCTTAAACCAAACAACCCTAGTATCTACACGACCAGGATTGTACTACGGA Rhinoceros_sondaicus ATCCCAGGTCGCCTAAATCAAACAACCCTAATCTCTACACGACCAGGATTATACTATGGG Rhinoceros_unicornis ATCCCGGGTCGCCTAAATCAAACAACCCTAATCTCTACACGACCAGGATTATACTACGGA Ceratotherium_simum ATCCCAGGACGATTGAATCAAACAACCCTAGTATCCACACGACCAGGATTATATTACGGA Diceros_bicornis ATCCCAGGACGCTTAAATCAAACAACCCTAGTATCTACACGACCAGGGTTATATTATGGA ** ** ** ** * ** ** ** ** * * * ***** ** * ** ** ** Tapirus_terrestris CAATGCTCAGAAATCTGCGGATCAAACCACAGCTTCATACCTATTGTTCTTGAACTGGTT Equus_caballus CAATGCTCAGAGATCTGCGGATCAAACCACAGCTTTATACCAATTGTCCTTGAACTAGTT Coelodonta_antiquitatis CAATGCTCAGAAATTTGTGGCTCTAACCACAGCTTTATGCCTATCGTCCTCGAATTAGTC Dicerorhinus_sumatrensis CAATGCTCAGAAATTTGTGGCTCCAACCACAGCTTTATGCCTATCGTCCTCGAATTAGTC Rhinoceros_sondaicus CAGTGCTCAGAGATCTGCGGCTCAAACCACAGCTTCATGCCTATCGTCCTTGAATTAGTC Rhinoceros_unicornis CAATGCTCAGAGATCTGCGGCTCAAACCACAGCTTCATGCCTATCGTCCTTGAATTAGTC Ceratotherium_simum CAGTGCTCAGAAATTTGCGGCTCAAATCACAGCTTCATACCTATTGTCCTTGAATTAGTC Diceros_bicornis CAATGCTCCGAAATTTGCGGCTCAAATCACAGCTTCATGCCTATCGTCCTTGAACTAGTC ** ***** ** ** ** ** ** ** ******** ** ** ** ** ** *** * ** Tapirus_terrestris CCATTAAGTACCTTTGAAAAATGATCTACATCAATACTTTAAAGTCATTAAGAAGCTA-T Equus_caballus CCACTGAAACACTTCGAAGAATGATCTGCATCAATATTATAAAGTCACTAAGAAGCTATT Coelodonta_antiquitatis CCACTAAAACATTTCGAAAAATGATCTGCATCAATACTCTAAAATCATTAAGAAGCTA-C Dicerorhinus_sumatrensis CCACTAAAACACTTCGAAAAATGATCTGCATCAATGCTCTAAAATCATTAAGAAGCTA-T Rhinoceros_sondaicus CCACTAAAACACTTCGAAAAATGATCTGCATCAATACTATAAGACCATTGAGAAGCTA-T Rhinoceros_unicornis CCACTAAAACACTTCGAAAAATGATCTACATCAATACTCTAAGATCATTAAGAAGCTA-C Ceratotherium_simum CCACTAAAACACTTCGAAAAATGATCTGCATCAATACTCTAAGACCATTAAGAAGCTA-T Diceros_bicornis CCACTAAAGCACTTCGAAAAATGATCTGCATCAATAATCTAAGACCATTAAGAAGCTA-C *** * * ** *** ******** ******* * *** ** * ******** Tapirus_terrestris ATAGCATTAACCTTTTAAGTTAAAGACTGAGGGTCTAAGTCCCTCCTTAATGATATGCCA Equus_caballus ATAGCATTAACCTTTTAAGTTAAAGATTGAGGGTTCAACCCCCTCCCTAGTGATATGCCA Coelodonta_antiquitatis ACAGCACCAATCTTTTAAATTGGAGATTGAGAGCCCAGATCTCTCCTTAGTGATATGCCA Dicerorhinus_sumatrensis ATAGCACCAATCTTTTAAATTGGAGACTGAGAGCCCAGATCTCTCCTTAGTGATATGCCA Rhinoceros_sondaicus ACAGCGTCAGCCTTTTAAGTTGAAGACTGAGAGTCCAAATCTCTCCTTAATGGTATGCCA Rhinoceros_unicornis ACAGCGTCAACCTTTTAAGTTGAAGACCGAGAGCCCAAATCTCTCCTTAATGATATGCCA Ceratotherium_simum ATAGCGTTAGCCTTTTAAGTTGAAGATTGAGAGCCCAAATCTCTCCTTAATGATATGCCA Diceros_bicornis ATAGCATCAGCCTTTTAAGCTGAAAATTGAGAGTCTAAATCCCTCCTTAATGGTATGCCA * *** * ******* * * * *** * * * **** ** ** ******* Tapirus_terrestris CAACTAGACACATCAACATGATTTATTAATATCACATCAATAATTATCACACTATTTATT Equus_caballus CAGTTGGATACATCAACATGATTTATTAATATCGTCTCAATAATCCTAACTCTATTTATT Coelodonta_antiquitatis CAACTAGATACATCAACATGATTTATTACCATTATATCAATAATCATCACCCTATTTATT Dicerorhinus_sumatrensis CAACTAGACACATCAACATGATTTATTACAATTATATCAATAATCATTACCCTATTCATT Rhinoceros_sondaicus CAACTAGACACATCGACATGATTTATTATTATCACATCAATAACTATCACCCTATTCATC Rhinoceros_unicornis CAACTAGATACATCAACATGATTTATTACCATCACGTCAATAACTATTACCCTGTTCATT Ceratotherium_simum CAACTAGACACATCAACTTGATCTATCACAATTGTATCAATAATCATTACCCTGTTCATC Diceros_bicornis CAACTAGACACATCAACATGATCTATCACAATTATATCAATAATCATTACCCTATTCATC ** * ** ***** ** **** *** * ** ******* * ** ** ** ** Tapirus_terrestris ATATTACAACTAAAAATTTCAAAACACCTGTACCCCTATGACCCAAAACTAAAAACAACT Equus_caballus GTATTTCAACTAAAAATCTCAAAGCACTCCTATCCGACACACCCAGAAGTAAAGACAACC Coelodonta_antiquitatis ATGTTCCAACTAAAAATTTCAAGCCACCTACATCCCCCAAATCCAGAGCTAAAATCAACC Dicerorhinus_sumatrensis GTATTCCAACTAAAAGTTTCGAACCACCTACATCCCTCCAACCCAGAACTAAAGCCAACT Rhinoceros_sondaicus ATACTCCAACTAAAACTTTCAAAGCACTCCTATCCCTCTAACCCAGCGCCTAAACCAACC Rhinoceros_unicornis ATATTCCAGCTAAAACTTTCAAAACACTCCTACCCCTCTAACCCAGAGCTAAAACCAATC Ceratotherium_simum ATATTCCAACTTAAACTTTCAAAATACTCCTACCCCTCAAGCCCAGAACTAAAATTAACT Diceros_bicornis ATATTCCAACTAAAACTTTCAAAATACTCCTACCCTTCAAACCCAGAACTGAAATTAACT * * ** ** *** * ** * ** * ** *** ** ** Tapirus_terrestris AAAGTGACAAAATATACCACCCCTTGAGAATCAAAATGAACGAAAATCTATTCGCTTCTT Equus_caballus AAAATAACAAAACACTCTGCCCCTTGAGAATCAAAATGAACGAAAATCTATTCGCCTCTT Coelodonta_antiquitatis AAAACACTAACATATACAACACCCTGAGAATCAAAATGAACGAAAATCTATTCACCTCTT Dicerorhinus_sumatrensis AAAACACTAACACATACAACACCTTGAGAATCAAAATGAACGAAAATCTATTCGCCTCTT Rhinoceros_sondaicus AAAGCATCAATATATACAACACCCTGAGAGTCAAAATGAACGAAAATTTATTCGCCTCTT Rhinoceros_unicornis AATACATCAATGCATACAACACCCTGAGAATCAAAATGAACGAAAATTTATTCGCCTCTT Ceratotherium_simum AAAACACCAACACATACAACACCCTGAGAATCAAAATGAACGAAAACTTATTTACCTCTT Diceros_bicornis AAAACACCAGCACATACAATACCCTGAGAATCAAAATGAACGAAAACTTATTTGCCTCTT ** * * * ** ***** **************** **** * **** Tapirus_terrestris TCGCTACCCCAACAATAATGGGTCTACCTATTGTTATCCTAATCATCATATTCCCAAGTA Equus_caballus TCGCTACCCCAACAATAGTAGGCCTCCCTATTGTAATTCTGATCATCATATTTCCCAGCA Coelodonta_antiquitatis TCACTACCCCTACAATAATAGGACTACCTATTGTTATCTTAATTATCATATTCCCCAGCA Dicerorhinus_sumatrensis TCACTACCCCTACAATAATAGGATTACCTATCGTCATCTTAATTATTATATTTCCCAGCA Rhinoceros_sondaicus TCACTACCCCAACAATAATAGGACTACCTATTGTTATCCTAATTATCATATTCCCCTGCA Rhinoceros_unicornis TCACTACCCCAACAATAATAGGACTACCTATTGTTATCCTAATTATTATATCCCCCAGCA Ceratotherium_simum TCGCTACCCCAACAATCATAGGACTACCTATTGTTATCCTAATTATCATATTTCCCAGCA Diceros_bicornis TCACTACCCCAACAATTATAGGACTACCTATTGTTATCCTAATTATTATATCCCCCAGCA ** ******* ***** * ** * ***** ** ** * ** ** **** ** * * Tapirus_terrestris TTCTATTTCCCTCATCCAACCGATTAATTAACAACCGTTTAATCTCTATCCAACAATGAC Equus_caballus TCCTATTCCCCTCACCCAACCGACTAATCAACAATCGCCTAATCTCAATTCAACAATGGC Coelodonta_antiquitatis TTATATTTCCCTCACCCAACCGACTTATTAATAACCGTCTAATCTCCATACAACAATGAC Dicerorhinus_sumatrensis TTATATTCCCCTCACCCAACCGACTCATCAACAATCGTTTAATTTCCATACAGCAATGAC Rhinoceros_sondaicus TCATATTCCCCTCATCCAACCGACTAGTCAACAATCGCCTAATCTCAATTCAACAATGAC Rhinoceros_unicornis TCATATTCCCTTCACCTAATCGACTAATCAACAACCGCCTAATCTCAATTCAACAATGAC Ceratotherium_simum TCATATTCCCCTCACCTAATCGACTAATTAACAACCGCCTAGTCTCCACCCAACAATGAC Diceros_bicornis TTATATTCCCCACATCCAATCGACTAATTAACAACCGCCTAATCTCCATCCAACAATGAC * **** ** ** * ** *** * * ** ** ** ** * ** * ** ***** * Tapirus_terrestris TAGTTCAACTTACATCAAAACAAATAATGTCCATCCATAATCACAAGGGACAAACATGAA Equus_caballus TAGTCCAACTTACATCAAAACAAATAATAGCTATCCATAACAGCAAAGGACAAACCTGAA Coelodonta_antiquitatis TACTCCGACTCACATCAAAACAAATAATATCCACTCACAACAGTAAAGGACAAACCTGAG Dicerorhinus_sumatrensis TCCTTCAGCTGACATCAAAGCAAATAATGTCCGCCCACAATAGTAAAGGACAAACCTGAG Rhinoceros_sondaicus TACTTCAACTAACATCAAAACAAATGATATCTATCCATAATAACAAAGGCCAAACCTGAG Rhinoceros_unicornis TACTTCAATTAACATCAAAACAAATAATATCTACCCATAATAACAAAGGTCAAACCTGAA Ceratotherium_simum TCCTTCAACTCACATCAAAACAAATATTATCTATCCACAACAACAAGGGTCAGACTTGAG Diceros_bicornis TTCTTCAACTCACATCAAAACAAATATTATCTATCCACAACAATAAAGGTCAGACCTGAG * * * * ******** ***** * * ** ** ** ** ** ** *** Tapirus_terrestris CACTAATACTTATATCACTTATTTTATTCATTGGCTCTACTAATCTTCTAGGCTTACTAC Equus_caballus CTCTTATACTCATATCACTGATCCTATTCATTGGCTCAACAAACTTATTAGGCCTACTAC Coelodonta_antiquitatis CACTAATACTCATATCCCTTATCCTATTTATTGGTTCAACCAACCTGCTAGGACTACTAC Dicerorhinus_sumatrensis CACTAATACTCATATCCCTTATCCTATTTATTGCTTCAACCAATCTACTGGGACTGTTAC Rhinoceros_sondaicus CACTAATACTTATATCCCTTATCCTATTTATTGGCTCAACCAATCTACTAGGCCTGTTAC Rhinoceros_unicornis CACTAATACTTATATCCCTCATCCTATTTATTGGCTCAACCAATCTACTAGGCCTGTTAC Ceratotherium_simum CACTAATACTCATATCTCTTATCTTATTTATCGGCTCAACCAACCTGCTAGGCCTACTAC Diceros_bicornis CACTAATACTTATATCCCTCATCCTATTTATTGGCTCAACTAACCTACTAGGCCTATTAC * ** ***** ***** ** ** **** ** * ** ** ** * * ** * *** Tapirus_terrestris CACACTCATTTACACCTACCACACAACTATCAATGAACCTAGGCATAGCTATTCCACTAT Equus_caballus CTCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCTATTCCCCTAT Coelodonta_antiquitatis CACACTCATTTACACCCACTACCCAACTATCAATGAATCTAGGCATAGCCATTCCTCTAT Dicerorhinus_sumatrensis CACACTCATTCACACCTACTACCCAACTGTCAATGAATCTAGGCATAGCTATCCCTCTGT Rhinoceros_sondaicus CCCACTCATTCACACCCACCACTCAACTGTCAATAAACCTGGGCATGGCCATTCCCCTGT Rhinoceros_unicornis CCCACTCATTTACACCTACCACTCAATTATCAATAAACCTAGGCATGGCTATTCCCCTAT Ceratotherium_simum CACACTCATTCACACCCACTACTCAACTATCAATAAACCTAGGCATAGCCATCCCCTTGT Diceros_bicornis CACACTCATTTACACCCACTACTCAACTATCAATAAACCTGGGCATGGCCATCCCCTTAT * ******** ***** ** ** *** * ***** ** ** ***** ** ** ** * * Tapirus_terrestris GAGCAGGCACAGTATTCATAGGCTTTCGTCACAAAACAAAAGCATCCTTAGCCCATTTTC Equus_caballus GGGCAGGGACAGTATTCATAGGCTTTCGTCACAAAACAAAAGCAGCCCTAGCCCACTTTC Coelodonta_antiquitatis GAGCAGGAACGGTATTTGTAGGATTCCGCCATAAAACCAAAGCATCTCTAGCCCATTTCC Dicerorhinus_sumatrensis GAGCAGGAACAGTATTTGTGGGATTTCGCCATAAAACCAAAGCATCTCTAGCTCACTTTC Rhinoceros_sondaicus GAACAGGAACAGTATTAGTAGGCTTCCGCTATAAAACCAAAGCATCTCTAGCCCATTTCC Rhinoceros_unicornis GAGCAGGAACAGTGCTCACAGGCTTCCGTCATAAAACCAAAGCATCCCTAGCCCACTTCC Ceratotherium_simum GAGCAGGGACGGTGTTTCTAGGCTTCCGCCATAAGACCAAAGCATCCCTAGCCCACTTCC Diceros_bicornis GGGCAGGAACGGTGTTCCTAGGCTTTCGCCATAATACCAAAACATCCCTAGCTCATTTCC * **** ** ** * ** ** ** * ** ** *** ** * **** ** ** * Tapirus_terrestris TTCCTCAAGGAACTCCCATCTTCCTAATTCCAATACTAGTTATCATTGAAACCATTAGCC Equus_caballus TACCTCAAGGGACGCCCATTTTCCTCATCCCCATACTAGTAATTATCGAGACTATCAGCC Coelodonta_antiquitatis TCCCTCAAGGAACACCTGTTTTCCTCATCCCCATACTAGTAATTATCGAAACCATCAGCC Dicerorhinus_sumatrensis TTCCCCAAGGAACACCTGTTTTTCTCATCCCCATACTAGTAATTATCGAAACCATCAGCC Rhinoceros_sondaicus TTCCACAAGGAACACCCATTTTTCTTATTCCAATACTAGTAATTATCGAAACCATCAGCC Rhinoceros_unicornis TCCCACAAGGAACACCCACTTTTCTTATCCCAATACTAGTAATTATCGAAACCATCAGCC Ceratotherium_simum TCCCCCAAGGAACACCTGTCTTCCTCATTCCTATACTAGTAATCATTGAAACCATCAGCC Diceros_bicornis TCCCCCAAGGAACACCCATTTTCCTCATCCCTGCACTAGTAATTATTGAAACCATCAGCC * ** ***** ** ** ** ** ** ** ****** ** ** ** ** ** **** Tapirus_terrestris TATTTATTCAACCAATAGCCTTAGCTGTACGACTTACAGCTAATATCACTGCTGGACATC Equus_caballus TATTTATTCAACCTGTAGCCCTAGCCGTGCGGCTAACCGCTAACATTACCGCCGGACACC Coelodonta_antiquitatis TATTTATCCAACCCATTGCCCTTGCCGTACGGCTAACAGCCAACATCACTGCAGGACATC Dicerorhinus_sumatrensis TATTTATTCAACCTATCGCCCTTGCCGTACGACTAACAGCCAACATCACTGCAGGGCACC Rhinoceros_sondaicus TATTTATTCAACCCGTGGCCCTAGCCGTACGATTAACAGCCAACATTACCGCAGGACACC Rhinoceros_unicornis TATTTATTCAACCCGTAGCCCTAGCCGTACGATTAACAGCCAACATTACAGCAGGACATC Ceratotherium_simum TATTTATTCAACCCGTAGCCCTAGCTGTACGATTAACAGCCAACATTACTGCCGGACACC Diceros_bicornis TATTTATTCAACCCGTAGCCCTAGCCGTACGACTAACAGCCAACATTACTGCCGGACACC ******* ***** * *** * ** ** ** * ** ** ** ** ** ** ** ** * Tapirus_terrestris TCCTGATGCACCTAATTGGAGGAGCAACACTGGCTCTAATAAATATTAGTCCTACCACAG Equus_caballus TCCTAATACACCTCATCGGAGGGGCAACACTAGCCCTCATAAGCATCAGCCCCTCAACAG Coelodonta_antiquitatis TCTTAATACACCTAATTGGAGGAGCAACGCTGGCCCTAATAAACATTAGCCCTACTACGG Dicerorhinus_sumatrensis TTCTAATACACTTAATCGGAGGAGCAACGCTGGCCCTAATAGACATTAGCCCCACTACAG Rhinoceros_sondaicus TCCTAATACACTTAATTGGAGGAGCAACACTAGCCCTAATAAACATTAGCCCAACTACAG Rhinoceros_unicornis TTCTAATACACTTAATCGGAGGGGCAACACTAGCCCTAATAAACATTAGCCCAACTACAT Ceratotherium_simum TTTTAATGCACTTAATCGGAGGAGCAACACTAGCTCTAATAAACATCAGCCCTACCACGG Diceros_bicornis TTTTGATATACTTAATCGGAGGAGCAACACTAGCTCTAATAAATATCAGCCCCACCACAG * * ** ** * ** ***** ***** ** ** ** *** ** ** ** * ** Tapirus_terrestris CCCTCACTACATTCATCATTCTCATTTTACTCACTATCCTTGAATTTGCAGTAGCCTTAA Equus_caballus CCCTTATTACGTTTATCATCCTAATTCTACTAACTATCCTCGAATTCGCAGTAGCTATAA Coelodonta_antiquitatis CCCTCATCACATTTATTATCCTCATTCTACTTACCATCCTTGAATTCGCTGTAGCCCTAA Dicerorhinus_sumatrensis CCCTTATCACGTTCATTATTCTCATTTTACTTACCATTCTTGAATTTGCCGTAGCCCTTA Rhinoceros_sondaicus CCCTCATCACATTTATTATTCTCGTCCTACTTATCATTCTCGAATTCGCTGTAGCTCTAA Rhinoceros_unicornis CCTTCATCACATTCATCACTCTCGTCCTACTTACCATTCTCGAATTCGCTGTAGCTTTAA Ceratotherium_simum CTCTTATCACATTTATTATTCTCATCTTACTCACTATTCTTGAGTTCGCCGTAGCCCTGA Diceros_bicornis CTCTTGTTACATTTATTATTCTCATCTTACTCACCATTCTTGAATTCGCTGTAGCCCTAA * * ** ** ** * ** * **** * ** ** ** ** ** ***** * * Tapirus_terrestris TTCAAGCTTACGTATTTACTCTCTTAGTAAGCCTTTATCTACACGACAACACTTAATGGC Equus_caballus TCCAAGCCTACGTATTCACTCTCCTGGTAAGCCTTTACTTACACGACAACACCTAATGAC Coelodonta_antiquitatis TTCAAGCTTACGTATTCACTCTTCTAGTAAGCCTATACCTACATGACAACACCTAATGAC Dicerorhinus_sumatrensis TTCAAGCTTACGTATTCACCCTTTTAGTAAGCCTCTACCTACACGACAATACCTAATGAC Rhinoceros_sondaicus TTCAAGCCTACGTATTCACCCTTCTAGTAAGCCTGTACTTACACGACAACACCTAATGAC Rhinoceros_unicornis TTCAAGCCTACGTATTCACCCTCTTAGTAAGCCTGTACTTACACGACAACACCTAATGAC Ceratotherium_simum TTCAAGCCTACGTGTTTACTCTTCTAGTAAGCCTCTACCTACATGACAACACCTAATGAC Diceros_bicornis TTCAAGCTTACGTATTTACCCTTCTAGTAAGCCTCTACCTGCACAACAACACTTAATGAC * ***** ***** ** ** ** * ******** ** * ** **** ** ***** * Tapirus_terrestris CCACCAAACTCACTCATACCACATAGTTAACCCCAGCCCATGACCACTTACAGGAGCTCT Equus_caballus CCACCAAACCCACGCTTACCACATAGTAAACCCCAGCCCATGACCACTTACAGGAGCCCT Coelodonta_antiquitatis CCACCAAACCCATGCATATCACATAGTTAACCCCAGCCCTTGACCTCTAACAGGAGCCCT Dicerorhinus_sumatrensis CCACCAGACCCACGCATACCACATAGTCAACCCCAGCCCTTGACCCCTAACAGGAGCCCT Rhinoceros_sondaicus CCACCAAACCCATGCATATCACATAGTCAACCCTAGCCCTTGACCCCTAACAGGAGCTCT Rhinoceros_unicornis CCACCAAACCCACGCATATCACATAGTCAACCCTAGCCCTTGACCCCTAACAGGAGCTCT Ceratotherium_simum CCACCAAACCCACGCATACCACATAGTAAACCCCAGCCCTTGACCTCTAACAGGAGCCCT Diceros_bicornis CCACCAAACCCACGCATACCATATAGTTAACCCCAGCCCTTGACCCCTAACAGGAGCCCT ****** ** ** * ** ** ***** ***** ***** ***** ** ******** ** Tapirus_terrestris ATCAGCCCTCCTTATAACTTCAGGCTTAGCTATATGATTTCACTTCAACTCAATATTACT Equus_caballus ATCAGCCCTCCTGATAACATCAGGACTAGCCATGTGATTTCACTTTAACTCAACCTTACT Coelodonta_antiquitatis CTCAGCCCTTCTTATAACATCAGGACTAGTAATATGATTCCACTACAACTCAGCACTCCT Dicerorhinus_sumatrensis CTCAGCCCTCCTCATAACATCTGGACTAGTAATATGATTCCACTACAACTCAATACTCCT Rhinoceros_sondaicus ATCAGCCCTTCTCATAACATCGGGCTTGGTAATATGATTCCACTACAACTCAACATTTCT Rhinoceros_unicornis ATCAGCTCTTCTCATAACATCCGGTCTAGTAATATGATTCCACTACAACTCAACACTTCT Ceratotherium_simum TTCAGCCCTCCTAATAACATCAGGACTAGCAATGTGATTCCACTATAACTCAATACTTCT Diceros_bicornis TTCAGCCCTCCTCATAACATCAGGGTTAGCAATATGATTTCATTATAACTCAACACTCCT ***** ** ** ***** ** ** * * ** ***** ** * ****** * ** Tapirus_terrestris ACTATATTTAGGATTAACAACTAACTTACTAACTATATACCAATGATGACGAGATGTTAT Equus_caballus TCTAGCTATAGGGCTATTAACTAACATCCTTACCATATATCAATGATGACGAGACATCAT Coelodonta_antiquitatis ACTGACCCTAGGACTGACAACCAATATATTAACCATATATCAATGATGGCGAGACGTTAT Dicerorhinus_sumatrensis ACTGACCCTAGGACTAACAACCAACATACTAACCATATACCAGTGGTGACGAGACGTTAT Rhinoceros_sondaicus ACTAACCCTAGGACTAACAACCAACCTACTAACTATATACCAATGATGACGAGACATTAT Rhinoceros_unicornis ACTAACCCTAGGACTAACAACTAACCTACTGACTATATACCAATGATGACGGGACATTAT Ceratotherium_simum ACTAACCCTCGGACTAATAACCAACTTGTTAACTATATACCAATGGTGACGAGATATTGT Diceros_bicornis ACTAACCCTCGGACTAACAACTAACCTACTAACTATATACCAATGATGACGAGACATTGT ** * ** * *** ** * * ** ***** ** ** ** ** ** * * Tapirus_terrestris CCGAGAAAGCACATTCCAAGGTCACCACACACCAACCGTCCAAAAAGGACTTCGATACGG Equus_caballus CCGAGAAAGCACATTCCAAGGCCATCACACATCAATCGTTCAAAAGGGACTCCGATATGG Coelodonta_antiquitatis CCGAGAAAGCACGTTCCAAGGCCATCACACACCTGCCGTACAAAAAGGACTTCGATACGG Dicerorhinus_sumatrensis TCGAGAGAGCACATTCCAAGGCCACCACACACCCGCTGTGCAAAAAGGACTTCGATACGG Rhinoceros_sondaicus CCGCGAAAGCACATTCCAAGGTCACCACACATCCGCTGTACAAAAAGGACTTCGATACGG Rhinoceros_unicornis CCGTGAAAGCACATTCCAAGGTCACCACACACCCGCTGTACAAAAAGGACTTCGATATGG Ceratotherium_simum TCGAGAAAGCACATTCCAAGGCCACCACACACTTGTAGTACAAAAAGGACTCCGATATGG Diceros_bicornis TCGAGAAAGCACATTCCAGGGCCACCACACGCTCGTAGTACAAAAGGGGCTCCGATACGG ** ** ***** ***** ** ** ***** ** ***** ** ** ***** ** Tapirus_terrestris CATGATCTTATTCATTGTCTCAGAAGTATTTTTCTTCTCAGGATTCTTCTGAGCCTTTTA Equus_caballus CATAATCCTTTTTATTATCTCAGAAGTCTTCTTCTTCTCTGGCTTCTTCTGAGCCTTTTA Coelodonta_antiquitatis CATAATCTTATTTATTATTTCAGAAGTATTCTTTTTCTCTGGCTTCTTCTGAGCCTTCTA Dicerorhinus_sumatrensis CATGATCCTATTTATTATCTCAGAAGTATTCTTCTTCTCCGGCTTCTTTTGAGCTTTCTA Rhinoceros_sondaicus CATAATCTTATTCATTATCTCAGAGGTATTCTTTTTCTCTGGCTTTTTCTGAGCCTTCTA Rhinoceros_unicornis CATAATCTTGTTCATTATCTCAGAAGTATTCTTTTTCTCCGGCTTTTTCTGAGCCTTCTA Ceratotherium_simum CATGATCCTGTTTATTATCTCAGAAGTATTTTTCTTCTCTGGCTTTTTCTGAGCCTTCTA Diceros_bicornis CATGATCTTATTTATTATCTCAGAAGTATTTTTCTTCTCTGGCTTTTTCTGAGCCTTTTA *** *** * ** *** * ***** ** ** ** ***** ** ** ** ***** ** ** Tapirus_terrestris CCACTCAAGCCTAGCCCCGACACCTGAACTAGGCGGTTGCTGACCACCTACAGGCATCCA Equus_caballus CCACTCAAGCCTAGCCCCCACACCCGAACTAGGCGGCTGCTGACCACCCACAGGTATCCA Coelodonta_antiquitatis CCACTCAAGTCTGGCCCCAACACCTGAACTCGGAGGATGCTGACCACCTACAGGCATTCA Dicerorhinus_sumatrensis CCACTCAAGCTTAGCCCCAACACCTGAGCTCGGAGGCTGCTGGCCACCCACAGGCATCCA Rhinoceros_sondaicus CCACTCAAGCCTAGCCCCAACACCCGAACTCGGAGGCTGTTGACCACCCACAGGCATCCA Rhinoceros_unicornis TCACTCAAGCCTAGCCCCAACACCCGAACTCGGAGGCTGTTGACCACCCACAGGCATCCA Ceratotherium_simum TCACTCAAGCCTAGCCCCAACCCCTGAACTTGGAGGTTGTTGACCACCCACTGGCATCCA Diceros_bicornis CCACTCAAGCCTAGCCCCAACTCCTGAACTCGGTGGTTGTTGACCACCCACTGGCATTTA ******** * ***** ** ** ** ** ** ** ** ** ***** ** ** ** * Tapirus_terrestris TCCCTTAAATCCCCTAGAAGTACCTCTTCTCAATACCTCAGTACTTCTAGCTTCTGGAGT Equus_caballus CCCCTTAAACCCCCTAGAAGTCCCCTTACTCAACACCTCAGTGCTCCTAGCATCTGGAGT Coelodonta_antiquitatis CCCCTTAAATCCTATAGAAGTACCCCTCCTTAATACCTCGGTTCTGCTAGCATCCGGAGT Dicerorhinus_sumatrensis CCCTTTGAATCCCATAGAAGTACCCCTTCTCAACACCTCAGTCCTCCTAGCATCCGGAGT Rhinoceros_sondaicus CCCCCTAAATCCCATAGAAGTGCCCCTCCTCAACACTTCAGTCCTTCTAGCATCTGGAGT Rhinoceros_unicornis CCCCCTAAACCCTATAGAAGTACCCCTCCTTAATACTTCAGTCCTCCTAGCATCAGGAGT Ceratotherium_simum CCCCCTAAACCCCATAGAAGTACCCCTCCTAAACACCTCAGTTCTCCTAGCATCTGGAGT Diceros_bicornis CCCTTTAAACCCTATAGAAGTACCCCTCCTAAACACCTCAATTCTTCTAGCATCCGGAGT ** * ** ** ******* ** * ** ** ** ** * ** ***** ** ***** Tapirus_terrestris CTCCATCACTTGAGCCCACCATAGCCTGATAGAAGGAGACCGCAAACATATATTACAAGC Equus_caballus CTCTATCACCTGAGCCCACCATAGCCTAATAGAAGGAAACCGTAAAAATATGCTCCAAGG Coelodonta_antiquitatis TTCAATTACCTGAGCCCATCACAGTTTAATAGAAGGTAACCGCAAACACATACTTCAAGC Dicerorhinus_sumatrensis CTCAATTACCTGAGCCCACCACAGTCTAATAGAAGGCAATCGCAAACACATACTTCAGGC Rhinoceros_sondaicus CTCCATCACCTGAGCCCACCACAGTTTAATAGAAGGCAATCGCAAACATATACTTCAAGC Rhinoceros_unicornis CTCCATTACCTGAGCCCACCACAGCCTAATAGAGGGCAATCGCAAACATATACTTCAAGC Ceratotherium_simum TTCCATCACCTGGGCCCACCATAGCCTAATGGAAGGCAATCGCAAACACATACTTCAAGC Diceros_bicornis ATCCATCACTTGGGCCCATCACAGCCTAATGGAAGGCAATCGCAAACATATACTCCAAGC ** ** ** ** ***** ** ** * ** ** ** * ** *** * ** * ** * Tapirus_terrestris CCTATTCATTACAATCTCTCTAGGAATCTACTTTACCTTACTTCAAGCCTCAGAATACTA Equus_caballus CCTATTCATCACAATTTCACTAGGCGTATACTTCACCCTTCTCCAAGCCTCAGAATACTA Coelodonta_antiquitatis CTTATTTATCACTATCTCCCTGGGCATTTACTTTACATTACTTCAAGCCTCAGAATACTA Dicerorhinus_sumatrensis CTTATTTATTACAATTTCCCTGGGCGTCTACTTCACACTACTCCAAGCTTCAGAGTACTA Rhinoceros_sondaicus CTTATTTATTACAATTTCATTAGGTATTTACTTCACACTACTTCAAGCTTCAGAATATTA Rhinoceros_unicornis CCTATTTATTACAATTTCACTAGGTATTTACTTCACACTACTCCAAGCTTCAGAATATTA Ceratotherium_simum CCTGTTCATTACAATCTCACTGGGGGTCTACTTCACACTACTTCAAGCTTCAGAATACTA Diceros_bicornis CCTATTCATCACAATCTCCCTAGGAATTTACTTCACATTACTTCAAGCTTCAGAATACTA * * ** ** ** ** ** * ** * ***** ** * ** ***** ***** ** ** Tapirus_terrestris CGAAGCATCATTTACAATTTCTGATGGCGTATATGGTTCAACCTTCTTTGTAGCCACAGG Equus_caballus TGAAGCCTCATTTACTATTTCAGATGGAGTATACGGATCAACATTTTTCGTAGCAACAGG Coelodonta_antiquitatis TGAAGCACCCTTCACAATTTCAGATGGCATTTATGGATCAACATTCTTCGTCGCCACAGG Dicerorhinus_sumatrensis TGAAGCACCGTTCACAATCTCAGATGGCGTCTACGGATCAACATTCTTCGTCGCCACAGG Rhinoceros_sondaicus CGAAGCACCGTTCACAATCTCAGATGGCGTATATGGATCAACATTCTTTGTCGCCACAGG Rhinoceros_unicornis CGAAGCACCATTTACAATCTCAGATGGTGTATACGGATCAACATTCTTTGTTGCCACAGG Ceratotherium_simum TGAAGCGCCATTTACAATCTCAGACGGTATCTATGGATCAACATTCTTCGTCGCCACAGG Diceros_bicornis TGAAGCACCATTTACAATCTCAGACGGCATTTACGGATCAACATTTTTCGTCGCCACAGG ***** * ** ** ** ** ** ** * ** ** ***** ** ** ** ** ***** Tapirus_terrestris CTTCCACGGACTACACGTAATTATTGGCTCTACCTTTCTTATTGTATGCTTCTTACGCCA Equus_caballus GTTCCACGGACTACACGTAATTATCGGATCTACCTTCCTCATTGTATGTTTCCTACGCCA Coelodonta_antiquitatis CTTTCACGGACTACACGTAATTATTGGCTCCACTTTCCTCATCGTCTGCTTCTTGCGCCA Dicerorhinus_sumatrensis CTTTCACGGACTACACGTAATCATTGGCTCTACTTTCCTTATTGTCTGTTTCTTACGCCA Rhinoceros_sondaicus CTTTCACGGACTACATGTAATCATTGGCTCTACCTTCCTAATTGTTTGTTTCTTACGCCA Rhinoceros_unicornis CTTTCACGGACTACATGTAATCATCGGCTCCACCTTCCTAATTGTTTGTTTCTTACGCCA Ceratotherium_simum CTTTCACGGACTACATGTAATTATTGGCTCCACTTTTCTTATTGTCTGTTTCCTACGTCA Diceros_bicornis CTTTCACGGACTACATGTAATTATTGGTTCCGCTTTTCTTATTGTCTGCTTCCTACGCCA ** *********** ***** ** ** ** * ** ** ** ** ** *** * ** ** Tapirus_terrestris ACTAAAATTCCACTTTACATCTAATCACCACTTTGGCTTTGAAGCAGCTGCCTGATACTG Equus_caballus ACTAAAATTCCACTTTACATCCAGCCACCACTTCGGATTCGAAGCAGCCGCTTGATACTG Coelodonta_antiquitatis ACTAAAATTCCACTTCACATCTAATCACCATTTTGGGTTTGAAGCAGCTGCCTGATACTG Dicerorhinus_sumatrensis ACTAAAATTCCACTTCACATCTAATCACCATTTTGGATTCGAAGCAGCTGCCTGATACTG Rhinoceros_sondaicus ACTAAAATTCCACTTCACATCCAACCACCATTTTGGATTCGAAGCAGCCGCTTGATACTG Rhinoceros_unicornis GCTAAAATTCCACTTCACATCCAACCACCACTTTGGATTCGAAGCAGCTGCTTGGTACTG Ceratotherium_simum ACTAAAATTTCACTTCACATCTAATCACCACTTTGGGTTCGAAGCAGCTGCTTGATACTG Diceros_bicornis ACTAAAATTCCACTTTACATCCAATCACCACTTTGGATTCGAAGCAGCTGCCTGATATTG ******** ***** ***** * ***** ** ** ** ******** ** ** ** ** Tapirus_terrestris ACATTTCGTAGACGTAGTATGACTATTCTTATACGTATCTATTTATTGATGAGGGTCATA Equus_caballus ACACTTCGTCGACGTAGTCTGACTATTCTTGTACGTCTCTATTTATTGATGAGGATCCTA Coelodonta_antiquitatis ACATTTCGTGGACGTAGTATGACTATTCCTATACGTATCTATCTATTGATGAGGCTCTTA Dicerorhinus_sumatrensis ACACTTCGTGGACGTAGTATGACTATTCCTATATGTATCTATTTATTGATGAGGCTCTTA Rhinoceros_sondaicus ACACTTCGTAGACGTGGTATGATTATTCTTGTACGTATCCATCTATTGATGAGGTTCCTA Rhinoceros_unicornis ACACTTCGTAGATGTAGTGTGATTATTCTTATACGTATCCATCTATTGATGAGGTTCCTA Ceratotherium_simum ACACTTCGTAGACGTAGTATGACTATTCCTATACGTGTCTATCTATTGATGAGGCTCCTA Diceros_bicornis ACACTTCGTAGACGTAGTATGACTATTCCTATATGTGTCTATCTATTGATGAGGCTCCTA *** ***** ** ** ** *** ***** * ** ** ** ** *********** ** ** Tapirus_terrestris TTCTCTTAGTACCAAATAGTACAATTGACTTCCAATCAATTAGTTTCGGTATAATCCGAA Equus_caballus TTCTTTTAGTATTGACCAGTACAATTGACTTCCAATCAATCAGCTTCGGTATAACCCGAA Coelodonta_antiquitatis TTCTTTTAGTATTAAACAGTACAATTGACTTCCAATCAATTAGCTTCGGTAAAATCCGAA Dicerorhinus_sumatrensis TTCTTTTAGTATCAAACAGTACAATTGACTTCCAATCAATTAGTTTCGGTAAAACCCGAA Rhinoceros_sondaicus TTCTTTTAGTATCAAACAGTACAATTGACTTCCAATCAATAAGCTTCGGTAGAGCCCGAA Rhinoceros_unicornis TTCTTTTAGTATCAAACAGTACAATTGACTTCCAATCAATCAGCTTCGGTAAAACCCGAA Ceratotherium_simum TTCTTTTAGTATTAAACAGTACAATTGACTTCCAATCAATCAGCTTCGGTAAAACCCGAA Diceros_bicornis TTCTTTTAGTATTAAACAGTACAATTGACTTCCAATCAATTAGCTTCGGTAAAGCCCGAA **** ****** * *********************** ** ******* * ***** Tapirus_terrestris AGAGAATAATAAACTTAATATTCACCCTATTTGTCAACACAACATTAGCTTCACTTCTTG Equus_caballus AAAGAATAATAAACCTCATACTGACACTCCTCACTAACACATTACTAGCCTCGCTACTCG Coelodonta_antiquitatis AAAGAATAATTAACCTGTTACTAACACTATTTATCAATACACTACTAGCCTCAGTACTAG Dicerorhinus_sumatrensis AAAGAATAATCAACCTAATATTAGCGCTATTTATCAATACACTACTAGCCTCAGTACTAG Rhinoceros_sondaicus AAAGAATAATTAACTTAATACTAACACTACTTATCAACACACTACTATCTTCAGTACTAG Rhinoceros_unicornis AAAGAATAATTAACCTAATCCTAACACTACTTATCAACACACTACTATCTTCAGTACTAG Ceratotherium_simum AAAGAATAATTAACCTCATACTAACATTATTTATCAACACATCACTAGCCTCAGTGCTAG Diceros_bicornis AAAGAATAATCAACCTCATACTAACACTATTTATCAACATATCACTAGCCTCAATGCTAG * ******** *** * * * * * * ** * * * ** * ** * ** * Tapirus_terrestris TATTAATTGCATTCTGATTACCTCAACTAAACATCTATACAGAAAAAGCCACTCCCTATG Equus_caballus TACTCATCGCATTCTGACTACCACAACTAAACATCTATGCAGAAAAAACCAGCCCATATG Coelodonta_antiquitatis TACTCATTGCATTCTGATTACCCCAATTAAACGTTTACTCAGAAAAATCTAGCCCCTACG Dicerorhinus_sumatrensis TGCTCATCGCATTCTGACTACCTCAGTTAAATATTTACTCAGAAAAATCCAGTCCCTACG Rhinoceros_sondaicus TACTCATTGCATTCTGACTACCCCAACTAAATATCTATACAGAAAAATCCAGTCCCTATG Rhinoceros_unicornis TACTCATTGCATTCTGACTACCCCAACTAAATATCTATACAGAAAAATCCAGTCCCTATG Ceratotherium_simum TACTCATCGCATTCTGACTACCCCAATTGAACATTTATACAGAAAAAGCCAGTCCCTATG Diceros_bicornis TACTCATCGCATTCTGACTACCCCAACTAAACATTTATACAGAAAAGACCAGTCCTTACG * * ** ********* **** ** * ** * ** ******* * * ** ** * Tapirus_terrestris AATGCGGATTTGATCCTATAGGATCAGCACGTCTGCCTTTTTCTATAAAATTTTTTCTAG Equus_caballus AATGCGGATTTGACCCTATAGGGTCAGCACGCCTCCCCTTCTCAATAAAATTTTTCTTAG Coelodonta_antiquitatis AATGCGGATTCGACCCCATAGGGTCAGCACGCCTACCCTTCTCCATAAAATTCTTCTTAG Dicerorhinus_sumatrensis AATGTGGATTTGACCCTATAGGATCAGCACGCCTACCTTTTTCCATAAAATTCTTCTTAG Rhinoceros_sondaicus AATGTGGGTTTGACCCAATAGTATCAGCACGCCTACCTTTCTCCATAAAATTTTTCCTGG Rhinoceros_unicornis AATGTGGATTTGACCCAATAGTATCAGCACGCCTACCCTTCTCCATAAAATTCTTTTTGG Ceratotherium_simum AATGCGGATTTGACCCAATAGGATCAGCACGCCTACCTTTCACCATAAAATTTTTCTTAG Diceros_bicornis AATGCGGATTTGACCCAATAGGATCAGCACGTCTACCTTTCTCCATAAAATTTTTCTTAG **** ** ** ** ** **** ******** ** ** ** * ******** ** * * Tapirus_terrestris TAGCCATCACATTTCTCCTATTCGACCTAGAAATTGCACTCCTACTACCACTACCATGAG Equus_caballus TGGCCATTACATTTCTGCTATTCGACTTAGAAATTGCCCTCCTATTACCCCTTCCATGAG Coelodonta_antiquitatis TAGCTATCACATTCCTACTTTTTGACCTAGAAATCGCACTCCTTCTGCCTCTACCATGAG Dicerorhinus_sumatrensis TGGCCATTACATTCCTACTCTTCGACCTAGAGATTGCACTCCTACTACCCCTACCATGAG Rhinoceros_sondaicus TAGCCATCACATTTCTGCTATTCGACCTAGAAATCGCACTTCTCCTACCCCTACCATGAG Rhinoceros_unicornis TAGCCATCACATTTCTGCTCTTCGACTTAGAAATCGCACTCCTCCTACCCCTGCCATGAG Ceratotherium_simum TAGCCATTACATTTTTACTCTTTGATTTGGAAATCGCCCTCCTCCTACCCCTACCATGAG Diceros_bicornis TGGCCATCACATTTTTACTTTTCGATCTAGAAATTGCCCTTCTCCTACCTCTACCATGAG * ** ** ***** * ** ** ** * ** ** ** ** ** * ** ** ******* Tapirus_terrestris CGTCTCAAACAACAAATCTTAAAACCATACTTACAATAGCGCTGACTCTTATCTCATTAC Equus_caballus CATCCCAAACAACTAACCTAAACACTATACTTATCATAGCACTAGTCCTAATCTCTCTTC Coelodonta_antiquitatis CATCTCAAACAACCAACCTAAAAACTATACTCACCATGGCACTAGCTCTAATCTCACTAC Dicerorhinus_sumatrensis CATCTCAAACAACCGACCTAAAAACCATACTCACCATGGCACTAGCCCTAATTTCACTAC Rhinoceros_sondaicus CGTCCCAAACAACTGACCTAAAAACTATACTCACCATAGCACTAATCCTAATCTCACTAC Rhinoceros_unicornis CATCCCAAACAACTAACCTAAAAACTATACTTACCATAGCACTAATCCTAATCTCACTAC Ceratotherium_simum CATCCCAAACTACAAACCTAAAAACCATACTTACCATAGCACTAATCCTAATTTCACTAC Diceros_bicornis CATCCCAAACCACAAACCTAAAAACCATACTTACCATGGCACTAGCCCTAATTTCACTAC * ** ***** ** * ** ** ** ***** * ** ** ** ** ** ** * * Tapirus_terrestris TAGCCATTAGCCTAGCCTACGAATGAACTCAAAAAGGACTAGAATGAACTGAATATGATA Equus_caballus TAGCCATCAGCCTAGCCTACGAATGAACCCAAAAAGGACTAGAATGAACTGAGTATGGTA Coelodonta_antiquitatis TCGCTGCTAGCCTAGCCTACGAATGAACTCAGAAAGGATTGGAATGAACCGAGTATGATA Dicerorhinus_sumatrensis TGGCTGCCAGCCTGGCCTACGAATGAACCCAAAAAGGACTAGAATGAACCGAATATGATA Rhinoceros_sondaicus TAGCCGCCAGCCTAGCTTACGAATGAACTCAAAAAGGACTAGAATGAACTGAATATGATA Rhinoceros_unicornis TAGCCGCCAGCCTAGCCTACGAATGAACTCAAAAAGGACTAGAATGAACTGAATATGATA Ceratotherium_simum TAGCTGCTAGCCTAGCCTACGAATGAACCCAAAAAGGACTAGAATGAGCTGAATATGATA Diceros_bicornis TAGCTGCCAGCCTAGCCTATGAATGAACTCAAAAAGGACTAGAATGAGCTGAATATGATA * ** ***** ** ** ******** ** ****** * ****** * ** **** ** Tapirus_terrestris ATTAGTTTAA--CAAAAACAAGTGATTTCGACTCACTAGACTATGATTTACTTCATAATT Equus_caballus ATTAGTTTAAACC-AAAACAAATGATTTCGACTCATTAAACTATGATTAACTTCATAATT Coelodonta_antiquitatis ATTAGTTTAAACCAAAAATAAATGATTTCGACTCATTAGACTATGATTTACTTCATAATT Dicerorhinus_sumatrensis ATTAGTTTAGACCAAAAATAAATGATTTCGACTCATTAGACTATGATTTACTTCATAATT Rhinoceros_sondaicus ATTAGTTTAAACCAAAAATAAATGATTTCGACTCATTAGATTATGATTTACTTCATAATT Rhinoceros_unicornis ATTAGTTTAAACCAAAAACAAATGATTTCGACTCATTAGATTATGATTTATTTCATAATT Ceratotherium_simum ATTAGTTTAAACT-AAAATAAATGATTTCGACTCATTAGACTATGATTTACTTCATAATT Diceros_bicornis ATTAGTTTAAACCAAAAATAAATGATTTCGACTCATTAGACTATGATTTACTTCATAATT ********* **** ** ************* ** * ******* * ********* Tapirus_terrestris ATCAA-ATGTCCCTAGCCCATATCAATATCTTTCTAGCATTCATAGTATCCCTTATAGGA Equus_caballus ACCAACATGTCACTAGTCCATATTAATATCTTCCTAGCATTCACAGTATCCCTCGTAGGC Coelodonta_antiquitatis ATCAA-ATGTCCCTAGTCCATATCAACGTCTTCCTAGCGTTCACTGTATCCCTTACAGGA Dicerorhinus_sumatrensis ATCAA-ATGTCCCTAGTCCATATAAACATCTTCCTAGCATTCACAGTATCTCTCATAGGA Rhinoceros_sondaicus ATCAA-ATGTCCCTAATTCATATCAATATTTTTCTAGCATTCACAGTATCCCTTATAGGA Rhinoceros_unicornis ATCAA-ATGTCCCTAATTCATATTAATATTTTTCTAGCATTTACAGTATCCCTTATAGGA Ceratotherium_simum ATCAA-ATGTCGCTAATCCATATTAATGTCTTTCTAGCATTTACAACATCCCTTATGGGA Diceros_bicornis ATCAA-ATGTCTCTAATCCACATTAACATCTTTCTAGCGTTTGCAGCATCTCTCGTGGGA * *** ***** *** ** ** ** * ** ***** ** *** ** ** Tapirus_terrestris CTACTAATATATCGATCCCATCTAATATCCTCACTACTGTGCCTAGAAGGTATAATATTA Equus_caballus CTACTAATGTACCGATCCCACCTAATATCCTCACTCCTATGCCTAGAAGGAATAATACTA Coelodonta_antiquitatis CTACTAATATATCGATCCCACCTAATATCCTCACTTCTATGCTTAGAAGGCATAATACTA Dicerorhinus_sumatrensis CTACTAATATATCGATCCCACCTAATATCCTCCCTTCTATGCCTGGAGGGCATAATACTA Rhinoceros_sondaicus CTATTAATATATCGATCCCACCTAATATCCTCACTCCTATGTCTAGAAGGTATAATACTA Rhinoceros_unicornis TTATTAATATACCGATCCCACTTAATATCCTCACTTCTATGCCTAGAAGGTATAATACTA Ceratotherium_simum CTATTAATATACCGATCCCACCTAATATCTTCACTCCTATGCCTAGAGGGCATAATATTA Diceros_bicornis CTACTAATATACCGATCTCACCTAATATCCTCACTACTATGCCTAGAAGGCATGATATTA ** **** ** ***** ** ******* ** ** ** ** * ** ** ** *** ** Tapirus_terrestris TCACTATTTATTATAGCAACCATAATAATCCTAAACTCCCACTTCACACTAGCTAGTATA Equus_caballus TCACTATTCGTCATAGCAACCATAATAGTCCTAAACACCCACTTCACACTAGCTAGTATA Coelodonta_antiquitatis TCACTATTTATCATAGCAACTATAACAGTCTTAAACTCTCATTTCACGCTAGCTAGCATA Dicerorhinus_sumatrensis TCATTATTCATCATGGCAACTATAATAGTCCTAAACTCCCATTTCACACTGGCCAGTATA Rhinoceros_sondaicus TCATTATTTATTATAGCAACTACAATAGTTCTAAACTCTCACTTCACACTAGCTATTATA Rhinoceros_unicornis TCACTATTTATTATAGCAACCATAATAGTCCTAAACTCTCACTTCACACTAGCTATCATA Ceratotherium_simum TCACTATTTATTATAGCAACTATAATAGTCCTAAACTCCCATTTCACACTAGCTAGCATA Diceros_bicornis TCACTATTTATTATAGCAACTATAACAGTCCTAAACTCCAATTTCACGCTAGCCAGCATA *** **** * ** ***** * ** * * ***** * * ***** ** ** * *** Tapirus_terrestris ATACCCATCATCCTACTAGTATTCGCAGCCTGTGAAGCAGCGCTAGGATTATCTCTCCTA Equus_caballus ATACCTATCATCTTACTAGTATTTGCTGCCTGCGAACGAGCTCTAGGATTATCCCTACTA Coelodonta_antiquitatis ATGCCCATTATCCTCCTAGTATTCGCAGCTTGTGAGGCCGCATTAGGACTATCCTTACTA Dicerorhinus_sumatrensis ATGCCTATTATCCTTCTCGTATTCGCAGCTTGTGAGGCTGCACTAGGACTATCCCTACTA Rhinoceros_sondaicus ATACCCATTATTCTCCTAGTATTCGCAGCCTGTGAAGCTGCGCTAGGACTATCCCTACTA Rhinoceros_unicornis ATACCCATTATCCTCTTAGTATTCGCAGCCTGTGAAGCTGCACTAGGACTGTCCCTACTA Ceratotherium_simum ATGCCCATCATTCTTCTAGTGTTCGCAGCCTGTGAAGCTGCATTAGGACTATCCCTACTA Diceros_bicornis ATACCCATCATCCTTCTAGTATTCGCAGCCTGTGAAGCTGCATTAGGGCTGTCCCTACTA ** ** ** ** * * ** ** ** ** ** ** ** **** * ** * *** Tapirus_terrestris GTTATAGTATCCAATACCTATGGAATAGACTATGTACAAAACCTCAATCTACTCCAATGC Equus_caballus GTCATAGTCTCCAATACTTATGGAGTAGACCACGTACAAAACCTTAACCTCCTCCAATGC Coelodonta_antiquitatis GTAATGATCTCCAACACCTATGGTACAGACTACGTACAAAGCCTCAATCTTCTCCAATGT Dicerorhinus_sumatrensis GTAATAATCTCCAACACCTATGGCACAGACTACGTACAGAGCCTCAATCTCCTCCAATGC Rhinoceros_sondaicus GTCATGATCTCCAACACTTACGGCACAGACTACGTACAAAATCTTAACCTCCTTCAATGC Rhinoceros_unicornis GTCATGATCTCCAACACTTACGGTATGGACTATGTACAAAATCTTAACCTCCTTCAATGC Ceratotherium_simum GTTATAATCTCCAACACTTACGGCACAGACTACGTACAAAACCTTAACCTCCTTCAATGT Diceros_bicornis GTTATAATCTCCAACACTTACGGCACAGACTACGTACAAAACCTTAACCTTCTCCAATGT ** ** * ***** ** ** ** *** * ***** * ** ** ** ** ***** Tapirus_terrestris TAAAAATCATCTTCCCTACTATAATACTAATTCCACTAACATGATTATCAAAAAAAAGTA Equus_caballus TAAAAATTATCATTCCCACAATCATACTTATGCCCCTTACATGACTATCAAAAAAGAATA Coelodonta_antiquitatis TAAAAGTTATCACTCCTACCCTAATACTAATTCCACTGACATGATTATCAAAAAGTAACA Dicerorhinus_sumatrensis TAAAAATCATTATCCCCACCCTAATACTAATTCCACTTACATGGCTATCAAAAAACAGCA Rhinoceros_sondaicus TAAAAATCATTATCCCCACCCTAATACTAATACCACTAACATGATTATCAAAAAATAACA Rhinoceros_unicornis TAAAAATCATTATCCCCACCTTAATATTAATGCCACTAACATGACTATCAAAAAACAACA Ceratotherium_simum TAAAAATTATTATCCCTACCCTAATATTAATTCCACTAACATGACTATCAAAAAATAGTA Diceros_bicornis TAAAAATTATTATCCCTACTCTAATATTAATCCCACTAACATGACTATCAAAAAACAACA ***** * ** ** ** * *** * ** ** ** ***** ********* * * Tapirus_terrestris TAATCTGAATTAATACTACAATATACAGCCTACTAATTAGTCTTATTGCTCTACCCCTTC Equus_caballus TAATCTGAATCAACACTACAACCTATAGTCTATTAATCAGCCTTATCAGCCTATCCCTCC Coelodonta_antiquitatis TAATCTGAATTAACACCACAACTTACAGCCTGCTAATCAGCCTCATCAGCCTATCATTCC Dicerorhinus_sumatrensis TAATCTGAATTAACACCACCACTTATAGCCTATTAATCAGCCTCATCAGCCTATCATTCC Rhinoceros_sondaicus TAATCTGAATCAACACAACAACCTACAGCCTATTAATCAGCCTCATTAGCCTGTCATTCC Rhinoceros_unicornis TAATCTGAATCAATACAACAGCCTACAGCCTATTAATCAGCCTCATCAGCCTATCATTCC Ceratotherium_simum TAATTTGAATCAACACCACAGCTTACAGCCTACTAATCAGCTTTATCAGCCTACCACTCC Diceros_bicornis TAATCTGAATCAACACCACAGCCTACAGCCTGCTAATTAGCCTTATCAGCCTACCACTCC **** ***** ** ** ** ** ** ** **** ** * ** ** * * * Tapirus_terrestris TAAACCAATCTGACGATAATAGCCTCAATTTCTCACTACTATTTTTCTCCGATCCCTTAT Equus_caballus TAAACCAACCTAGCAACAATAGCCTAAACTTCTCACTAATATTCTTCTCCGATCCCCTAT Coelodonta_antiquitatis TAAACCAACCCAGCGAAAACAGCTTTAACATCTCTCCAACATTCTTTTCCGACCCCTTGT Dicerorhinus_sumatrensis TAAACCAACCCAACGAAAACAGCCTTAACATCTCCCTAACATTCTTTTCCGACCCTTTAT Rhinoceros_sondaicus TAAACCAATTCAATGAAGACAGCCTCAACGTCTCTCTAGCATTCTTTTCCGACCCCCTAT Rhinoceros_unicornis TAAATCAATTCAATGAAGACAGCCTCTACATCTCTCTAACATTCTTTTCCGACCCCTTAT Ceratotherium_simum TGAGCCAATTTAACGAAAACAGCCTCAACATATCCCTGACATTCTTTTCTGACCCTTTAT Diceros_bicornis TAAACCAATTTAACGAAAACAGTCTCAATATATCCCCAATATTCTTTTCTGACCCCCTAT * * *** * * ** * * * ** * *** ** ** ** ** * * Tapirus_terrestris CAGCACCTCTCCTAGTACTAACAACATGACTGCTACCATTAATACTTATAGCTAGTCAAC Equus_caballus CAGCCCCACTTCTGGTGTTGACAACATGACTACTGCCACTAATACTCATAGCCAGCCAAC Coelodonta_antiquitatis CAGCACCCTTACTGGCTCTCACTACGTGACTGCTCCCACTCATAATCATAGCCAGCCAAC Dicerorhinus_sumatrensis CAACACCCCTACTAATTCTCACCACATGACTACTCCCGCTCATAATTATGGCCAGCCAAC Rhinoceros_sondaicus CAGCACCACTACTAGTACTAACCACATGACTACTTCCGCTTATAATTATAGCCAGCCAGC Rhinoceros_unicornis CAGCACCCCTACTAGTACTAACCACATGACTACTTCCACTTATAATTATAGCCAGCCAGC Ceratotherium_simum CAGCACCTTTACTAGTACTAACCACGTGACTGCTCCCACTTATAATCATAGCTAGTCAAC Diceros_bicornis CAGCACCTTTACTAGTACTAACCACATGACTGCTTCCACTCATGATCATAGCCAGTCAAC ** * ** * ** * ** ** ***** ** ** * ** * ** ** ** ** * Tapirus_terrestris ACCACCTGTCAAAAGAACCATTAACTCGAAAAAAACTATATATTACTATACTAGTCTTAC Equus_caballus ACCATCTATCTAAGGAACCACTAATCCGAAAAAAACTCTACATCACCATGCTAACCATAC Coelodonta_antiquitatis ACCATCTATCTAAAGAACCCCTAGCCCGAAAAAAACTCTATATCACAATACTAATTACAC Dicerorhinus_sumatrensis ACCACCTGTCCAAAGAACCCCTGACCCGAAAGAAACTCTACATTACAATATTAGTCATAC Rhinoceros_sondaicus ACCACCTATCCAAAGAACCCCTCTCCCGAAAAAAGCTCTACATTACAATATTAATCATAC Rhinoceros_unicornis ACCACCTATCCAAAGAACCCATTACCCGAAAAAAGCTCTACATTACAATACTAATTATGC Ceratotherium_simum ACCACCTATCCAAAGAGCCTCTAGCCCGAAAAAAACTCTACATTACAATACTAATTACAC Diceros_bicornis ACCACCTATCCAAAGAACCCCCAGCCCGAAAAAAACTTTACATTACAATACTAGTTATAC **** ** ** ** ** ** ***** ** ** ** ** ** ** ** * Tapirus_terrestris TCCAAATATTCCTAATTATAACCTTCACTGCTACAGAACTAATCTCCTTTTACATTTTAT Equus_caballus TTCAAACTTTCCTAATCATGACTTTTACCGCCACAGAACTAATCTCCTTCTACATCCTAT Coelodonta_antiquitatis TTCAATTATTCCTAATTATAACCTTCACATCTATAGAATTAATCTCCTTCTACATTCTAT Dicerorhinus_sumatrensis TACAAATACTCCTAATCATAACCTTCACCTCCATAGAATTAATCTCTTTCTACATCCTAT Rhinoceros_sondaicus TCCAACTACTCCTAATTATGACTTTCACCGCCACAGAACTAATCTTCTTCTACATCTTAT Rhinoceros_unicornis TTCAATTACTCTTAATTATAACCTTCACCGCCACAGAATTAATCCTCTTCTACGTCCTAT Ceratotherium_simum TCCAAACATTCCTAATCATAACCTTTACCGCCACAGAACTAATCTTCTTTTACATCTTAT Diceros_bicornis TCCAAACATTTCTAATCATAACCTTTACCGCCACAGAACTAATCTCCTTCTATATCCTAT * *** * **** ** ** ** ** * * **** ***** ** ** * *** Tapirus_terrestris TCGAAGCAACACTAGTACCAACACTTATCATCATTACCCGCTGAGGTAACCAAACAGAAC Equus_caballus TTGAAGCCACATTAGTTCCAACACTAATTATCATCACCCGCTGAGGCAACCAAACAGAAC Coelodonta_antiquitatis TTGAAGCAACTCTAATTCCAACACTAATCATTATCACCCGATGAGGTAATCAAACAGAGC Dicerorhinus_sumatrensis TCGAAGCAACACTAATCCCAACACTAATTATTATCACTCGGTGAGGTAACCAAACAGAAC Rhinoceros_sondaicus TTGAAGCAACATTAATTCCAACACTAATCATCATTACCCGATGAGGTAATCAAACAGAAC Rhinoceros_unicornis TTGAAGCTACATTAATTCCAACACTAATTATTATTACCCGATGAGGTAATCAAACAGAAC Ceratotherium_simum TCGAAGCAACACTAATTCCAACACTAATTATTATTACTCGATGGGGTAACCAAACAGAAC Diceros_bicornis TTGAAGCAACACTAATTCCAACACTAATTATTATTACTCGATGAGGTAACCAAACAGAAC * ***** ** ** * ******** ** ** ** ** ** ** ** ** ******** * Tapirus_terrestris GACTAAATGCAGGCCTTTACTTTCTATTCTATACGTTAGTAGGATCCCTCCCACTTCTAG Equus_caballus GCCTGAACGCAGGCCTCTACTTCCTATTCTACACACTAATAGGTTCCCTCCCACTCTTAG Coelodonta_antiquitatis GACTAAATGCAGGCCTCTACTTCTTATTCTACACACTAACAGGGTCATTACCACTCCTAA Dicerorhinus_sumatrensis GACTAAATGCAGGCCTCTACTTCTTATTTTACACACTAACAGGATCACTACCCCTTCTAA Rhinoceros_sondaicus GACTAAACGCTGGTTTTTACTTTCTATTCTATACACTAACAGGATCACTACCACTCCTAA Rhinoceros_unicornis GACTAAACGCCGGCTTTTACTTTCTATTCTATACACTAACAGGATCACTACCGCTCCTAA Ceratotherium_simum GACTAAACGCAGGCTTTTACTTTTTATTTTATACACTAACAGGATCACTCCCGCTCCTAA Diceros_bicornis GACTAAACGCGGGCTTCTACTTTTTATTTTACACACTAACAGGATCACTCCCACTCCTAA * ** ** ** ** * ***** **** ** ** ** *** ** * ** ** ** Tapirus_terrestris TTGCATTAATCACTACCCAAAACTTTACAGGCTCGCTAAATCTACTATTAACCCAATACT Equus_caballus TTGCACTAATCTCTATCCAAAACCTAACAGGCTCACTAAACTTCCTATTAATTCAATACT Coelodonta_antiquitatis TTGCACTAATTTATATTCAAAACCTCACGGGCTCACTAAATCTATTACTAATTCAATACT Dicerorhinus_sumatrensis TCGCATTAATCTACATTCAAAATCTCACAGGCTCATTAAACCTACTACTAATTCAATACT Rhinoceros_sondaicus TCGCATTAATCCACATCCAAAACATCACAGGCTCGCTAAATCTACTACTAATCCAATACT Rhinoceros_unicornis TTGCATTAATCCACATCCAGAACATCACAGGCTCACTAAATCTACTACTAATCCAATACT Ceratotherium_simum TCGCACTAACCCACATCCAAAACCTTACAGGCTCACTAAACCTTCTACTAATTCAATACT Diceros_bicornis TTGCACTAACCCACATCCAAAACCTTACAGGCACACTAAACCTTCTACTAATCCAATATT * *** *** * ** ** * ** *** * **** * ** *** ***** * Tapirus_terrestris GAACCCAACCACTACCCAACTCCTGATCTAGTATATTCCTATGAACAGCATGCATAATAG Equus_caballus GAAACCAAGCACTACCCGACTCTTGATCCAATATTTTCCTATGACTAGCATGTATAATAG Coelodonta_antiquitatis CAACCCAAACACTACCCGACTCCTGATCCAATGCTCTACTGTGACTAGCATGCATAATAG Dicerorhinus_sumatrensis CAGCCCAAACACTACCCGACTCCTGATCCAATGCCCTCTTATGACTAGCATGCATAATAG Rhinoceros_sondaicus CAACTCAAACCCTACCTAATTCCTGATCTAGCATCTTCCTATGACTGGCATGCATAATAG Rhinoceros_unicornis CAGCTCAAACGCTACCCAATTCCTGATCTAACACCTTCCTATGACTGGCATGCATAATAG Ceratotherium_simum CAACCCAGACACTGCCCAGCTCCTGATCCAATGCCTTCCTATGACTAGCATGCATAATAG Diceros_bicornis CAACCCAAACATTACCCAACTCCTGATCTAACGCTTTCCTATGATTAGCATGCATAATAG * ** * * ** ** ***** * * * *** ***** ******* Tapirus_terrestris CATTCATGGTAAAAATACCACTATATGGCCTACATCTATGACTACCAAAAGCACATGTAG Equus_caballus CATTCATAGTCAAAATACCGGTATATGGTCTTCACCTCTGACTCCCAAAAGCCCATGTAG Coelodonta_antiquitatis CATTCATAGTAAAAATACCCCTCTACGGCCTCCACCTCTGACTACCCAAAGCACACGTTG Dicerorhinus_sumatrensis CATTCATAGTAAAAATACCCCTCTATGGCCTCCACCTATGACTCCCCAAAGCACATGTCG Rhinoceros_sondaicus GATTCATAGTAAAAATACCTCTCTACGGCCTCCACCTCTGACTACCTAAAGCACACGTTG Rhinoceros_unicornis GATTTATAGTAAAAATACCCCTCTATGGCCTCCATCTCTGATTACCCAAAGCACATGTTG Ceratotherium_simum CATTCATAGTAAAAATACCCCTCTACGGCCTTCACCTCTGATTACCCAAAGCACATGTTG Diceros_bicornis CATTCATAGTAAAAATACCCCTATACGGCCTTCACCTCTGACTACCCAAAGCACACGTTG *** ** ** ******** * ** ** ** ** ** *** * ** ***** ** ** * Tapirus_terrestris AAGCCCCTATTGCTGGCTCTATAGTACTAGCAGCTATCCTACTAAAACTAGGAGGCTATG Equus_caballus AAGCCCCAATTGCCGGATCCATAGTGCTAGCAGCCATTCTACTAAAACTAGGAGGCTACG Coelodonta_antiquitatis AAGCCCCCATTGCCGGCTCCATAGTACTAGCAGCCATCCTACTAAAACTAGGGGGCTACG Dicerorhinus_sumatrensis AAGCCCCCATTGCCGGCTCTATAGTATTAGCAGCTATCCTACTAAAGCTAGGCGGCTACG Rhinoceros_sondaicus AAGCCCCCATCGCTGGCTCCATAGTACTAGCAGCCATTCTACTAAAACTAGGGGGCTATG Rhinoceros_unicornis AAGCCCCTATTGCCGGCTCCATAGTACTAGCAGCCATCCTACTAAAACTAGGAGGCTATG Ceratotherium_simum AAGCCCCTATTGCCGGCTCCATAGTACTGGCAGCTATTTTACTAAAACTAGGAGGTTACG Diceros_bicornis AAGCCCCTATTGCTGGTTCCATAGTACTAGCAGCCATCTTACTAAAACTAGGAGGTTACG ******* ** ** ** ** ***** * ***** ** ******* ***** ** ** * Tapirus_terrestris GAATATTACGAATTACCACTATCCTAAATCCCCTAACAAGCTACATAGCTTATCCCTTTC Equus_caballus GAATACTACGAATTACAACAATACTAAACCCCCAAACTAGCTTTATAGCCTACCCCTTCC Coelodonta_antiquitatis GAATATTACGAATTACAACAATCCTCAACCCCCTAACAAGTTACATAGCCTATCCCTTCC Dicerorhinus_sumatrensis GAATATTACGAATCACAATAATCCTAAATCCCCTAACAAATTACATAGCCTACCCATTCC Rhinoceros_sondaicus GCATGCTACGAATCACAATAATTCTTAATCCCCTGACAAGTCACATAGCCTACCCATTTC Rhinoceros_unicornis GAATGCTACGAATCACAATAATCCTTAACCCCCTAACAAGCCACATAGCTTATCCATTTC Ceratotherium_simum GAATGCTACGGATCACTATAATTCTTAACCCCCTAACAAGTTATATAGCTTACCCGTTTC Diceros_bicornis GAATGCTACGGATCACAATAATTCTCAACCCCTTAACAAGCTACATAGCTTACCCATTTC * ** **** ** ** * ** ** ** *** ** * ***** ** ** ** * Tapirus_terrestris TCATATTATCCCTATGAGGAATAATTATAACAAGCTCCATTTGCCTCCGCCAAACAGATC Equus_caballus TCATACTATCCCTGTGAGGAATAATCATAACTAGTTCCATCTGCTTGCGACAAACCGATC Coelodonta_antiquitatis TTATATTATCCTTATGAGGGATAATCATAACCAGCTCAATCTGCCTACGCCAAACAGATC Dicerorhinus_sumatrensis TCATACTATCCCTATGAGGAATAATTATAACCAGCTCAATCTGCCTGCGCCAAACAGACC Rhinoceros_sondaicus TTATGCTGTCCCTATGAGGAATAATCATAACCAGTTCAATCTGCCTGCGCCAAACAGACC Rhinoceros_unicornis TTATATTATCCCTATGAGGAATAATCATAACCAGTTCAATCTGCCTACGCCAAACAGACC Ceratotherium_simum TTATACTATCCTTGTGAGGAATAATTATAACTAGCTCAATCTGCTTACGCCAAACAGACC Diceros_bicornis TTATCCTATCCCTGTGAGGGATAATTATAACCAGCTCAATCTGCTTACGCCAAACAGACT * ** * *** * ***** ***** ***** ** ** ** *** * ** ***** ** Tapirus_terrestris TTAAATCTCTCATCGCTTACTCTTCCGTTAGCCACATGGCTCTAGTAATTGTAGCTATCC Equus_caballus TAAAATCACTTATTGCATACTCCTCTGTCAGCCACATAGCCCTAGTAATCGTAGCCGTCC Coelodonta_antiquitatis TAAAATCACTCATCGCATACTCTTCTGTCAGCCACATAGCCTTAGTAATCGTAGCCGTCC Dicerorhinus_sumatrensis TGAAGTCACTTATCGCGTATTCCTCCGTCAGCCATATAGCCTTAGTAATCGTAGCTGTCC Rhinoceros_sondaicus TAAAATCACTCATCGCATACTCCTCTGTCAGCCACATAGCCCTAGTGATCGTAGCCATCC Rhinoceros_unicornis TAAAATCACTTATCGCATACTCCTCCGTCAGCCACATAGCTTTAGTAATCGTAGCCATCC Ceratotherium_simum TAAAGTCACTCATTGCATACTCCTCCGTCAGCCATATGGCTTTAGTAATCGTAGCCGTTC Diceros_bicornis TAAAATCACTTATCGCATACTCCTCCGTCAGCCACATGGCTCTAGTAATCGTAGCCGTTC * ** ** ** ** ** ** ** ** ** ***** ** ** **** ** ***** * * Tapirus_terrestris TCATCCAAACACCCTGAAGTTACATAGGAGCTACAGCCCTAATAATCGCACACGGTCTAA Equus_caballus TCATCCAAACACCATGAAGTTATATAGGAGCTACAGCCCTAATAATCGCTCACGGCCTTA Coelodonta_antiquitatis TCATCCAGACACCATGGAGTTACATAGGAGCTACAGCCCTAATAATCGCCCATGGCCTAA Dicerorhinus_sumatrensis TCATCCAAACACCATGAAGTTATATAGGAGCCACAGCCCTAATGATCGCCCATGGCCTAA Rhinoceros_sondaicus TCATCCAAACACCATGAAGTTACATAGGAGCCACAACCTTAATAATTGCCCACGGCCTTA Rhinoceros_unicornis TCATCCAAACACCATGAAGTTACATAGGAGCCACAGCCTTAATAATTGCCCATGGTCTCA Ceratotherium_simum TTATCCAAACACCATGAAGCTATATAGGAGCCACAGCCCTAATAATTGCCCACGGCCTCA Diceros_bicornis TTATCCAAACACCATGAAGCTATATAGGAGCCACGGCCCTAATAATCGCCCACGGCCTCA * ***** ***** ** ** ** ******** ** ** **** ** ** ** ** ** * Tapirus_terrestris CCTCATCAATATTATTCTGCCTAGCAAACTCAAACTATGAACGAATCCATAGTCGAACTA Equus_caballus CATCATCAATACTATTCTGCCTGGCAAACTCAAATTACGAACGTACCCATAGCCGAACTA Coelodonta_antiquitatis CATCATCAGTATTATTTTGCCTAGCAAATTCAAATTATGAACGAACCCATAGCCGAACTA Dicerorhinus_sumatrensis CATCATCAGTGCTGTTCTGTCTAGCAAACTCAAACTATGAACGAACCCACAGCCGGACCA Rhinoceros_sondaicus CATCATCAGTACTATTCTGTCTAGCAAACTCAAACTACGAACGCACACACAGCCGAACTA Rhinoceros_unicornis CATCATCAGTACTATTCTGCCTAGCAAACTCAAACTACGAACGCACTCATAGCCGAACTA Ceratotherium_simum CGTCATCAGTATTATTCTGCCTAGCAAACTCAAATTATGAACGAACCCACAGCCGAACCA Diceros_bicornis CATCGTCAGTACTATTTTGCCTAGCAAACTCAAATTACGAACGAACCCACAGCCGAACCA * ** *** * * ** ** ** ***** ***** ** ***** * ** ** ** ** * Tapirus_terrestris TAATCCTAGCCCGCGGACTCCAAACACTCCTACCACTAATAGCAGCATGATGATTACTAG Equus_caballus TAATCCTAGCCCGCGGGCTTCAAACACTTCTTCCCCTTATAGCAGCCTGATGACTATTAG Coelodonta_antiquitatis TAATCCTAGCCCGAGGACTACAAACACTCCTCCCACTAATAGCTATGTGATGACTATTAG Dicerorhinus_sumatrensis TAATCCTAGCCCGAGGATTACAAACACTCCTCCCACTAATGGCTATGTGATGACTGCTAG Rhinoceros_sondaicus TAATCCTAGCTCGAGGATTACAAACACTTCTCCCACTAATAGCCACATGATGACTACTAG Rhinoceros_unicornis TAATCCTAGCTCGAGGACTGCAAACACTTCTCCCACTAATAGCCATATGATGACTACTAG Ceratotherium_simum TAATCCTAGCTCGAGGACTACAAACGCTTCTCCCACTAATAGCCATATGATGACTACTAG Diceros_bicornis TAATCCTAGCTCGAGGACTACAAACGCTCCTCCCACTAATAGCCATGTGATGACTACTAG ********** ** ** * ***** ** ** ** ** ** ** ****** * *** Tapirus_terrestris CAAGCCTAACTAATCTAGCTTTACCCCCTACAATTAATCTAATCGGAGAATTATTTGTAG Equus_caballus CCAGCCTAACCAACCTGGCCCTCCCTCCCAGCATTAACCTAATTGGAGAGCTATTCGTAG Coelodonta_antiquitatis CAAGCCTAACTAACTTAGCTCTACCTCCAACAATCAACCTTGTAGGAGAGCTATTCGTAG Dicerorhinus_sumatrensis CAAGCTTAACTAACTTGGCCCTACCCCCCACAATCAACCTTGTAGGAGAACTATTTGTAG Rhinoceros_sondaicus CGAGCCTAACTAATCTAGCCCTACCCCCAACAATCAACCTCGTTGGAGAACTATTCGTAG Rhinoceros_unicornis CAAGCCTAACTAATCTAGCCCTACCCCCAACAATCAACCTCGTCGGAGAGCTATTCGTAG Ceratotherium_simum CAAGCCTGACTAATCTAGCCCTACCCCCAACAATTAACCTTGTCGGAGAACTATTTGTAG Diceros_bicornis CAGGCCTGACCAACCTAGCCTTACCCCCAACAATCAACCTCATCGGAGAGCTGTTTGTAG * ** * ** ** * ** * ** ** * ** ** ** * ***** * ** **** Tapirus_terrestris TTATAACATCATTCTCATGATCCAACATCACCATTATCCTAACAGGAACCAACATTATCA Equus_caballus TAATATCATCATTCTCATGATCAAATATTACCATTATCCTAATAGGAGCCAATATCACCA Coelodonta_antiquitatis TAATATCATCATTCTCATGATCTAACATCACTATTATCCTAATAGGTACAAACATTATCA Dicerorhinus_sumatrensis TGATATCATCATTCTCATGATCTAATATCACTATCATCCTAATAGGCACAAACATTATCA Rhinoceros_sondaicus TAGTAGCATCATTCTCATGATCTAACTTAACCATCATCCTAATGGGAACCAATATCATTA Rhinoceros_unicornis TAGTGTCATCATTCTCATGATCTAACTTGACCATTATCCTAATAGGAACCAATATCATTA Ceratotherium_simum TAATATCATCATTCTCATGATCCAATATCACTATTATCCTCATGGGAACTAACATCATCA Diceros_bicornis TAATATCATCATTCTCATGATCCAACATCACTATTATCCTCATGGGAACTAACATCATCA * * **************** ** * ** ** ***** * ** * ** ** * * Tapirus_terrestris TTACTGCCCTATATTCCCTCTACATATTAATCACAACACAACGAGGCAAATATACATATC Equus_caballus TCACCGCCCTCTACTCCCTATACATACTAATCACAACACAACGAGGGAAATACACACACC Coelodonta_antiquitatis TCACCGCTCTTTACTCCCTCTACATATTAATCACAACACAACGAGGTAAATACACCTACC Dicerorhinus_sumatrensis TTACTGCCCTATACTCCCTCTACATACTAATCACAACACAACGAGGCAAATACACCTATC Rhinoceros_sondaicus TCACCGCCTTGTACTCCCTCTACATATTAATCACAACACAACGAGGCAAGTACACCTACC Rhinoceros_unicornis TTACCGCCCTATACTCCCTCTATATATTAATCATAACACAACGAGGCAAGTATACCTACC Ceratotherium_simum TCACTGCCTTATACTCCCTCTATATACTAATCACAACACAACGAGGTAAATACACCCACC Diceros_bicornis TCACTGCCCTATACTCCCTCTACATACTAACCACAACACAACGAGGTAAATACACCCACC * ** ** * ** ***** ** *** *** ** ************ ** ** ** * * Tapirus_terrestris ACATTAATAATGTAAAGCCATCATTCACACGAGAAAACGCACTCATAGCTCTACATTTAC Equus_caballus ATATCAACAGCATTAAACCTTCATTTACACGAGAAAACGCACTCATGGCCCTCCACATGA Coelodonta_antiquitatis ACATCAACAACATCAAACCATCATTCACCCGAGAAAACACACTCATGGCCCTCCACCTTT Dicerorhinus_sumatrensis ACATCAACAACATCAAGCCATCATTTACACGAGAAAATACACTTATAACCCTCCACCTTC Rhinoceros_sondaicus ACATCAACAACATTAAACCATCCTTCACACGAGAAAACACACTAATAGCCCTCCACCTCC Rhinoceros_unicornis ACATCAACAACATTAAACCATCATTCACACGAGAAAATATACTAATAGCCCTCCACCTCC Ceratotherium_simum ACATCAACAACATCAAACCATCATTTACACGAGAAAATACACTTATAGCCCTCCATCTCT Diceros_bicornis ACATCAACAATATCAAACCATCATTTACACGAGAAAATACACTCATAGCCCTCCATCTCT * ** ** * * ** ** ** ** ** ******** *** ** * ** ** * Tapirus_terrestris TACCCCTTTTACTACTATCACTCAATCCTAAAATCATCCTAGGAGTCACATACTGTAGAT Equus_caballus CTCCCCTACTACTCCTATCACTTAACCCTAAAATTATCCTAGGCTTTACGTACTGTAAAT Coelodonta_antiquitatis TACCTTTACTACTCCTATCATTAAACCCTAAAATTATTCTAGGAACCCTGTACTGTAGAT Dicerorhinus_sumatrensis TACCCCTGTTACTCCTATCACTAAACCCTAAAATTATCCTAGGAACTCTATACTGTAGAT Rhinoceros_sondaicus TACCCCTTCTACTCCGATCACTAAACCCTAAAATTATTATAGGGGCTATGTATTGTAGAT Rhinoceros_unicornis TACCCCTTCTACTTCTATCACTGAACCCTAAAATTATTCTAGGAACTATGTACTGTAGAT Ceratotherium_simum TACCCCTATTACTCTTATCACTCAACCCTAAAATTATTCTAGGAACCCTGTACTGCAGAT Diceros_bicornis TACCTTTATTGCTCCTATCGCTCAACCCTAAAATCATTCTAGGAACCCTATACTGTAGAT ** * * ** *** * ** ******** ** **** ** ** * ** Tapirus_terrestris ATAGTTTAACAAAAACATTAGATTGTGAATCTAACAATAGAAACTCAAAACTTCTTATTT Equus_caballus ATAGTTTAACAAAAACACTAGATTGTGGATCTAGAAACAGAAACTTAATATTTCTTATTT Coelodonta_antiquitatis ATAGTTTAACAAAAACATTAGATTGTGAGCCTAATAATAGAAACTTAACACTTCTTATCT Dicerorhinus_sumatrensis ATAGTTTAACAAAAACATCAGATTGTGAATCTAATAATAGAAACTTAACACTTCTTATCT Rhinoceros_sondaicus ATAGTTTAACAAAAACACTAGATTGTGAATCTGGTAATAGAAACTTAACACTTCTTATCT Rhinoceros_unicornis ATAGTTTAACAAAAACATTAGATTGTGAATCTAATAATAGAAAATTAACACTTCTTATCT Ceratotherium_simum ATAGTTTAACAAAAACATTAGATTGTGAATCTAATAATAGAAGCTTAACACTTCTTATCT Diceros_bicornis ATAGTTTAACAAAAACATTAGATTGTGAATCTGACAATAGAAGCCCAACACTTCTTATCT ***************** ******** ** ** **** ** * ******* * Tapirus_terrestris ACCGAAAAAGTATGCAAGAACTGCTAATTCATGCTCCCATGTATAAC-AACATGGCTTTT Equus_caballus ACCGAGAAAGTATGCAAGAACTGCTAATTCATGCCCCCATGTCCAACAAACATGGCTCTC Coelodonta_antiquitatis ACCGAGAAAGAATGCAAGAACTGCTAACTCACGCCTCCATACCTAAC-AGTATGGCTTTC Dicerorhinus_sumatrensis ACCGAGAAAGAATGCGAGAGCTGCTAACTCACGCCTCCATACCTAAC-AATATGGCTTTC Rhinoceros_sondaicus ACCGAGAAAGCACGCAAGAACTGCTAACTCATGCCCCCATATTTGAC-AATATGGCTTTC Rhinoceros_unicornis ACCGAGAAAGCACGCAAGAACTGCTAACTCATGCCCCCATATTTAAC-AATATGGCTTTC Ceratotherium_simum ACCGAGAAAGAATGCAAGAACTGCTAACTCATGCCCCCGTACTTAAC-AGTATGGCTCTC Diceros_bicornis ACCGAGAAAGAATGCAAGAACTGCTAACTCATGCCCCCACACCTAAC-AGTGTGGCTCTC ***** **** * ** *** ******* *** ** ** ** * ***** * Tapirus_terrestris TCA-ACTTTTAAAGGATAAGAGTTATCCATTGGTCTTAGGAACCAAAAAATTGGTGCAAC Equus_caballus TCAAACTTTTAAAGGATAGGAGCTATCCGTTGGTCTTAGGAACCAAAAAATTGGTGCAAC Coelodonta_antiquitatis TCAAACTTTTAAAGGATAGAAGTTATCCGTTGGTCTTAGGAACCAAAAAATTGGTGCAAC Dicerorhinus_sumatrensis TCAAACTTTTAAAGGATAGGAGTTATCCATTGGTCTTAGGAACCAAAAAATTGGTGCAAC Rhinoceros_sondaicus TCAAACTTTTAAAGGATGGGAGCTATCCGTTGGTCTTAGGAACCAAAAAATTGGTGCAAC Rhinoceros_unicornis TCAGACTTTTAAAGGATAGGAGTTATCCATTGGTCTTAGGAACCAAAAAATTGGTGCAAC Ceratotherium_simum TCAAACTTTTAAAGGATGGTAGTTATCCGTTGGTCTTAGGAATCAAAAAATTGGTGCAAC Diceros_bicornis TCAAACTTTTAAAGGATAACAGTTATCCGTTGGTCTTAGGAATCAAAAAATTGGTGCAAC *** ************* ** ***** ************* ***************** Tapirus_terrestris TCCAAATAAAAGTAATAAACATATTTTCTTCTCTTATACTAACTTCATTAATTATACTAA Equus_caballus TCCAAATAAAAGTAATCAACATGTTCTCCTCCCTCATACTAGTTTCACTATTAGTACTAA Coelodonta_antiquitatis TCCAAATAAAAGTAATAAATATATTCTCCCCTCTTATATTAACCTCACTACTTATACTAA Dicerorhinus_sumatrensis TCCAAATAAAAGTAATAAATATATTCTCCCCTCTCATACTAACCTCACTATTTATACTAA Rhinoceros_sondaicus TCCAAATAAAAGTAATAAACATATTTTCCTCTCTTATACTAACCTCACTATTCATCCTAA Rhinoceros_unicornis TCCAAATAAAAGTAATAAACATTTTCCCCTCTCTCATACTAACCTCATTATTCACTCTAA Ceratotherium_simum TCCAAATAAAAGTAATAAACATATTCCCTTCTCTTATACTAACCTCATTACTTATACTAA Diceros_bicornis TCCAAATAAAAGTAATAAACATATTCCCCTCTCTTATACTAACCTCATTACTTATACTAA **************** ** ** ** * * ** *** ** *** ** * **** Tapirus_terrestris CACTACCAATCATCATAACCGCCCTCAATTACCACAAAAATGAATTGTACCCTTACCATG Equus_caballus CCCTCCCAATCATATTATCAATCTTCAATACCTACAAAAACAGCACGTTCCCGCATCATG Coelodonta_antiquitatis CACTACCAATTATCACAATTACTACTAACACCCACAAAAACACCACGTACTCCTACTTCG Dicerorhinus_sumatrensis CACTACCAATTATCTCAATCACTACCAACACTCATAAAAACGCCACATACCCCTACCTAG Rhinoceros_sondaicus CTCTACCAATTATTACATCTACCCTCAACACCCACAAAAACAATAACACTCCTTATCACA Rhinoceros_unicornis CACTACCAATTATTGCATCTACCCTCAACATCCACAAAAACAGTAACACTCCTCACCACA Ceratotherium_simum CACTACCAATTATTACAACCACTATCAACACCCACAAAAACAGCACATATCCCTACTACG Diceros_bicornis CACTACCAATTATTACAATTACCATCAACACCCACAAAAACAATACATACCCTCGCTACG * ** ***** ** * ** * ***** * Tapirus_terrestris TAAAAAACATTATTTCATATTCCTTCGTTACTAGCCTCATCCCTACAATAATATTCATCC Equus_caballus TAAAAAACACTATCTCATATGCCTTCATTACTAGCCTAATTCCCACTATAATATTTATTC Coelodonta_antiquitatis TAAAAAATACCATCTCATGTGCTTTCATCACCAGCCTCATCCCCACAATAATATTCATTC Dicerorhinus_sumatrensis TAAAAAATACTATCTCATGTGCCTTTATTACCAGCCTTATTCCCGCAATAATATTTATCC Rhinoceros_sondaicus TAAAAAATACCATCTCACTTGCCTTCATCACCAGCCTTATCCCTGCAATAATATTTATTT Rhinoceros_unicornis TAAAAAATATCATCTCATTTGCTTTCATCATTAGCCTTATCCCCACAATAATATTTATTT Ceratotherium_simum TAAAAAATATCATCTCATATGCCTTCATCACAAGCCTCATCCCCACAATAATGTTTATCC Diceros_bicornis TAAAAAACATCATCTCATATGCCTTCATCACTAGCCTCATTCCCACAATAATATTTATCC ******* * ** *** * * ** * * ***** ** ** * ***** ** ** Tapirus_terrestris ACTCCGGCCAAGAAACAATTATCTCAAACTGACATTGAATAACCATTCAAACACTAAAAC Equus_caballus ACTCTGGACAAGAAACAATTATCTCAAACTGACACTGAATAACCATACAAACCCTCAAAC Coelodonta_antiquitatis AATCAGGCCAAGAAATAATTATCTCAAACTGACACTGAATAACAATTCAAACCCTAAAAC Dicerorhinus_sumatrensis AATCAGGCCAAGAAGTAATCATTTCAAACTGACACTGAATGACAATCCAAACCCTAAAAC Rhinoceros_sondaicus ACTCAGGCCAAGAAATAATCGTCTCGAACTGACACTGAATAACAACTCAAACCCTAGAAC Rhinoceros_unicornis ACTCAGGCCAAGAAATGATTATCTCAAACTGACACTGGATAACAACTCAAACTCTAAAAC Ceratotherium_simum ACTCAGGCCAAGAAATAATTATCTCAAACTGACACTGAATAACAATTCAAACTCTAAAAT Diceros_bicornis ACTCAGGCCAAGAAATAATTATCTCAAACTGACACTGAATAACAATTCAAACCCTAAAAT * ** ** ****** ** * ** ******** ** ** ** * ***** ** ** Tapirus_terrestris TATCACTCAGCTTTAAACTAGACTACTTTTCAATAATCTTTGTACCAGTGGCTCTCTTCG Equus_caballus TATCCCTAAGCTTCAAACTAGATTACTTCTCAATAATTTTCGTACCAGTAGCCCTATTCG Coelodonta_antiquitatis TATCCCTCAGCTTTAAACTAGACTACTTCTCAATAATTTTTGTACCAGTGGCACTTTTTG Dicerorhinus_sumatrensis TATCCCTCAGCTTTAAGCTAGACTACTTCTCAATAATTTTTGTACCAGTAGCACTCTTCG Rhinoceros_sondaicus TGTCACTCAGCTTCAAACTAGACTACTTCTCAATAATCTTCGTGCCAGTAGCCCTCTTTG Rhinoceros_unicornis TATCACTTAGCTTTAAACTAGACTACTTCTCAATAATCTTCGTACCAGTAGCTCTCTTTG Ceratotherium_simum TATCACTCAGCTTCAAACTAGACTACTTCTCAATGATCTTCGTACCAGTAGCACTTTTCG Diceros_bicornis TATCACTCAGCTTCAAACTAGACTACTTCTCAATAATCTTTGTACCAGTAGCACTTTTCG * ** ** ***** ** ***** ***** ***** ** ** ** ***** ** ** ** * Tapirus_terrestris TCACATGATCTATCATAGAGTTCTCAATATGATATATACACTCAGATCCCTACATTACTC Equus_caballus TAACATGATCTATTATGGAATTCTCCCTATGATACATGCACTCAGATCCTTACATTACTC Coelodonta_antiquitatis TCACATGATCCATCATAGAATTCTCAATATGATATATACACTCAGATCCCTATATCACCC Dicerorhinus_sumatrensis TCACATGGTCCATCATAGAATTCTCAATATGATACATACACTCAGACCCCTACATCACCC Rhinoceros_sondaicus TTACGTGGTCCATTATAGAATTCTCAATTTGATACATACACTCAGACCCCCATATTACCC Rhinoceros_unicornis TCACATGATCCATTATAGAATTCTCAATTTGGTACATACACTCAGACCCCCATATCACCC Ceratotherium_simum TCACATGATCCATCATAGAGTTCTCAATATGATACATACACTCAGATCCCCACATCACCC Diceros_bicornis TCACATGATCTATCATAGAGTTCTCAATATGATATATACACTCAGATCCCCACATCACCC * ** ** ** ** ** ** ***** * ** ** ** ******** ** * ** ** * Tapirus_terrestris AATTCTTTAAGTATCTCCTCACATTCTTAATTACCATAATAATTTTAGTCACAGCAAACA Equus_caballus GATTTTTTAAATACTTACTTACATTCCTCATCACTATAATAATTCTAGTCACAGCTAACA Coelodonta_antiquitatis AATTCTTCAAATACCTCCTCATATTCCTCATTACCATAATAATCCTAGTTACAGCCAACA Dicerorhinus_sumatrensis AGTTCTTCAAGTACCTCCTCATATTCCTCATTACCATAATAATCCTAGTCACAGCCAACA Rhinoceros_sondaicus AATTCTTTAAATACCTCCTCATATTCCTCATCACCATAATAATCCTAGTCACAGCCAATA Rhinoceros_unicornis AATTCTTTAAGTATCTCCTCATATTCCTCATCACCATAATAATCCTAGTCACAGCCAACA Ceratotherium_simum AATTCTTCAAGTACCTTCTCATATTCCTCATTACCATAATAATCTTAGTAACAGCCAACA Diceros_bicornis AATTCTTCAAGTACCTTCTCATATTTCTTATTACTATAATAATTCTAGTAACAGCCAATA ** ** ** ** * ** * *** * ** ** ******** **** ***** ** * Tapirus_terrestris ACCTATTCCAACTTTTCATTGGGTGAGAAGGAGTCGGAATCATGTCATTTTTACTAATCG Equus_caballus ACCTTTTCCAACTGTTCATCGGATGGGAGGGAGTAGGCATCATGTCATTCTTACTAATCG Coelodonta_antiquitatis ACCTCTTCCAACTGTTCATTGGATGGGAAGGCGTAGGGATTATGTCATTCCTACTAATCG Dicerorhinus_sumatrensis ACCTCTTCCAATTATTCATCGGATGAGAGGGCGTAGGGATCATGTCATTCCTACTAATCG Rhinoceros_sondaicus ACCTATTCCAACTATTCATCGGATGAGAAGGCGTAGGGATCATATCATTCCTATTAATTG Rhinoceros_unicornis ACCTATTTCAACTATTCATCGGATGGGAGGGCGTAGGAATCATATCATTTCTGTTAATCG Ceratotherium_simum ACCTCTTCCAGCTGTTCATCGGGTGAGAAGGCGTAGGAATCATATCATTCTTATTAATTA Diceros_bicornis ACCTCTTCCAACTGTTCATCGGATGAGAAGGCGTAGGAATCATATCATTCTTACTAATCA **** ** ** * ***** ** ** ** ** ** ** ** ** ***** * **** Tapirus_terrestris GCTGATGATATGGCCGTACAGATGCAAATACCGCCGCCTTACAAGCAATCCTATACAATC Equus_caballus GATGATGATACGGCCGAACAGATGCCAACACCGCGGCCCTTCAAGCAATCCTTTATAACC Coelodonta_antiquitatis GCTGATGATACGGCCGAACAGACGCAAACACAGCCGCCCTACAAGCCGTCCTATACAACC Dicerorhinus_sumatrensis GCTGATGATATGGCCGAACAGATGCAAACACAGCCGCCCTGCAAGCCGTTCTGTACAACC Rhinoceros_sondaicus GCTGATGATACGGCCGAACAGACGCAAACACAGCCGCCCTACAAGCCATTCTATATAACC Rhinoceros_unicornis GCTGATGATACGGTCGAACAGACGCGAACACAGCCGCCCTACAAGCCATTCTATATAACC Ceratotherium_simum GCTGATGATATGGTCGAACAGACGCAAACACAGCCGCCCTACAAGCTATCCTGTACAACC Diceros_bicornis GCTGATGATATGGTCGAACAGACGCAAATACAGCCGCCCTGCAAGCCATCCTATACAATC * ******** ** ** ***** ** ** ** ** *** * ***** * ** ** ** * Tapirus_terrestris GCATCGGAGATATTGGATTTATTATATCAATGGCATGATTCCTACTAAATGTAAACTCAT Equus_caballus GCATCGGGGATATCGGCTTCATCATGGCCATAGCCTGATTCCTATTCAACACCAACACAT Coelodonta_antiquitatis GTATTGGCGATATTGGCTTCATTATATCAATGGCATGATTCCTATGTAATATAAACTCAT Dicerorhinus_sumatrensis GCATCGGCGACATCGGCTTCATCATGTCAATAGCATGATTCCTATGCAACATAAACTCAT Rhinoceros_sondaicus GCATTGGCGACATCGGCTTCATCATATCAATAGCATGATTCCTGTCCAACATAAACTCAT Rhinoceros_unicornis GCATCGGTGATATCGGCTTCATCATGTCAATAGCATGATTCCTATCCAACATAAACTCAT Ceratotherium_simum GCATCGGTGATATCGGCTTTATTATATCAATAGCATGATTCCTATTCAACACAAACTCAT Diceros_bicornis GTATCGGCGATATCGGTCTCATCATATCAATAGCATGATTCTTGCTCAATATAAACTCAT * ** ** ** ** ** * ** ** * ** ** ****** * ** *** *** Tapirus_terrestris GGGATCTACAACAAATCTTTACACTCAACCCCGATCACACAAACCTCCCATTAATCGGAC Equus_caballus GAGACCTCCAACAAATCTTCATACTCGACCCCAACCTTACCAACCTCCCGCTCCTAGGCC Coelodonta_antiquitatis GAGACCTTCAACAAATCTTTACACTCAACTCCACCCACACAAACCTCCCATTAATAGGAC Dicerorhinus_sumatrensis GAGACCTCCAACAAATCTTTACACTCAACTCCACCCACACAAACCTCCCACTAATAGGAC Rhinoceros_sondaicus GAGATCTTCAACAAATCTTCACACTTGACCATAACCATACAAACCTCCCACTAATAGGTC Rhinoceros_unicornis GAGACCTTCAACAAATCTTCACACTTGACCCTAACCACACAAACCTCCCACTAATAGGAC Ceratotherium_simum GAGACCTTCAACAAATTTTTTCACTCAACTACAACCACACAGACCTCCCACTAATAGGTC Diceros_bicornis GGGACCTTCAACAAATTTTTACACTCAACCACAGCCACACAAACCTTCCACTAATAGGCC * ** ** ******** ** *** ** * ** **** ** * * ** * Tapirus_terrestris TCCTACTAGCTGCAGCCGGAAAATCAGCCCAATTCGGCCTACACCCATGACTTCCATCAG Equus_caballus TCCTCCTAGCCGCAACTGGCAAATCCGCTCAATTTGGACTCCACCCATGACTTCCTTCAG Coelodonta_antiquitatis TTCTCCTAGCCGCAACTGGAAAATCTGCTCAATTCGGCCTACACCCATGACTTCCCTCAG Dicerorhinus_sumatrensis TTCTCCTAGCCGCAACCGGAAAATCCGCCCAATTCGGCCTACACCCATGACTTCCCTCAG Rhinoceros_sondaicus TTCTCCTAGCCGCAACCGGAAAATCCGCCCAATTCGGCCTACACCCATGACTTCCTTCAG Rhinoceros_unicornis TTCTCCTAGCCGCAACCGGAAAATCTGCCCAATTCGGCCTACACCCATGACTTCCCTCAG Ceratotherium_simum TCCTCCTAGCCGCAACCGGAAAATCCGCTCAATTCGGCCTACATCCCTGACTCCCCTCGG Diceros_bicornis TCCTCCTAGCCGCAACCGGAAAATCCGCCCAATTCGGCCTACATCCCTGACTTCCCTCTG * ** ***** *** * ** ***** ** ***** ** ** ** ** ***** ** ** * Tapirus_terrestris CTATAGAAGGTCCTACACCAGTATCAGCCTTACTTCACTCAAGTACAATAGTTGTCGCAG Equus_caballus CCATAGAGGGCCCTACACCAGTCTCAGCCCTACTCCACTCCAGCACAATAGTTGTAGCAG Coelodonta_antiquitatis CTATAGAAGGTCCCACACCAGTTTCAGCCCTACTCCACTCAAGCACAATAGTCGTTGCAG Dicerorhinus_sumatrensis CTATAGAGGGCCCCACACCAGTCTCAGCCCTACTTCACTCGAGCACAATAGTTGTCGCAG Rhinoceros_sondaicus CCATAGAAGGACCCACACCAGTCTCAGCCCTACTTCACTCAAGTACAATAGTTGTTGCAG Rhinoceros_unicornis CCATAGAAGGGCCCACACCAGTCTCAGCTCTACTTCACTCAAGTACAATAGTTGTTGCAG Ceratotherium_simum CCATAGAAGGACCAACACCAGTCTCAGCCCTACTTCACTCAAGCACAATAGTCGTTGCGG Diceros_bicornis CCATAGAGGGACCAACACCAGTTTCAGCCCTACTCCATTCAAGCACAATAGTCGTCGCAG * ***** ** ** ******** ***** **** ** ** ** ******** ** ** * Tapirus_terrestris GTGTATTCCTATTAATCCGTTTCCACCCTTTAATAGAAATAAACAAGCTAGCCCAAACAC Equus_caballus GCGTCTTCCTGCTAATCCGCTTCCATCCACTAATAGAAAACAACAAAACAATCCAGTCAC Coelodonta_antiquitatis GTGTATTCCTACTAATCCGCTTCCACCCATTAATAGAAAATAACAAGACAATCCAAACCC Dicerorhinus_sumatrensis GTGTATTCCTACTAATTCGCTTCCACCCGCTAATAGAAAATAACAAAACAGTCCAAACGT Rhinoceros_sondaicus GCGTATTTCTACTAATCCGCTTTCACCCGCTAATAGAAAATAATAAAATAATCCAAACAT Rhinoceros_unicornis GCGTATTCCTACTAATCCGCTTTCACCCACTAATAGAAAATAACAAAACAGCACAAACAC Ceratotherium_simum GCGTATTCCTACTAATTCGCTTCCACCCACTAATAGAAAACAATAAAACAGTCCAAACAT Diceros_bicornis GTGTATTCCTACTAATTCGCTTCCACCCACTAATAGAAAACAACAAAACAATCCAAACAC * ** ** ** **** ** ** ** ** ********* ** ** * ** * Tapirus_terrestris TAACATTATGTTTAGGAGCTATTACCACACTATTTACAGCAATATGTGCACTCACCCAAA Equus_caballus TTACCCTATGCCTAGGAGCCATCACCACACTATTCACAGCAATCTGCGCACTCACTCAAA Coelodonta_antiquitatis TCACACTATGCTTAGGAGCCATCACCACCCTATTCACAGCAATCTGTGCACTTACCCAAA Dicerorhinus_sumatrensis TCACATTATGTCTAGGAGCCATTACCACCCTGTTCACAGCAATCTGTGCACTGACCCAAA Rhinoceros_sondaicus TCACACTATGCTTAGGAGCAATCACCACCTTATTCACAGCAATCTGCGCACTCACCCAAA Rhinoceros_unicornis TCACACTATGCCTAGGAGCAATCACCACCCTATTCACAGCAATTTGCGCACTCACCCAAA Ceratotherium_simum TCACACTATGCTTGGGGGCCATTACCACCTTATTCACAGCAATCTGCGCTCTCACCCAAA Diceros_bicornis TCACACTATGCTTAGGGGCTATCACCACCCTATTCACAGCAATCTGCGCCCTCACCCAAA * ** **** * ** ** ** ***** * ** ******** ** ** ** ** **** Tapirus_terrestris ACGATATTAAAAAAATTATTGCCTTCTCTACCTCAAGCCAATTAGGACTAATAATCGTAA Equus_caballus ACGATATCAAAAAAATCATTGCTTTCTCCACCTCCAGCCAACTAGGCCTGATAATCGTAA Coelodonta_antiquitatis ACGACATCAAAAAAATCATCGCCTTCTCCACCTCAAGCCAATTAGGCCTAATAATCGTGA Dicerorhinus_sumatrensis ACGATATCAAAAAAATCATCGCCTTCTCCACCTCAAGCCAACTAGGCCTGATAATCGTAA Rhinoceros_sondaicus ATGATATCAAAAAAATCATCGCTTTTTCCACCTCAAGCCAATTGGGCCTAATAATTGTAA Rhinoceros_unicornis ACGACATCAAAAAAATCATCGCCTTCTCCACCTCAAGCCAACTAGGTTTAATGATCGTAA Ceratotherium_simum ACGATATCAAAAAAATCATCGCCTTCTCTACCTCAAGTCAACTAGGCCTAATAATCGTAA Diceros_bicornis ACGATATCAAAAAAATCATCGCCTTCTCCACCTCAAGCCAACTAGGCCTAATAATCGTAA * ** ** ******** ** ** ** ** ***** ** *** * ** * ** ** ** * Tapirus_terrestris CTATCGGTATTAATCAACCATATCTAGCTTTCCTACACATCTGCACCCACGCATTCTTCA Equus_caballus CCATCGGTATCAATCAACCCTACCTAGCATTCCTCCACATTTGCACTCACGCATTCTTCA Coelodonta_antiquitatis CTATTGGCATTAACCAACCATACCTAGCCTTCCTCCACATTTGTACACACGCATTCTTCA Dicerorhinus_sumatrensis CCATTGGCATTAACCAACCATACCTAGCCTTCCTCCACATTTGCACACACGCATTCTTCA Rhinoceros_sondaicus CTATCGGCATCAACCAACCTCACCTAGCCTTCCTTCATATCTGCACACACGCATTCTTCA Rhinoceros_unicornis CTATCGGCATCAACCAACCCCACCTAGCCTTCCTTCACATCTGCACACACGCATTCTTCA Ceratotherium_simum CTATTGGTATTAACCAACCATACCTGGCTTTCCTCCATATCTGCACACACGCATTCTTCA Diceros_bicornis CTATCGGTATTAACCAACCATACCTAGCTTTCCTCCACATCTGCACACACGCATTCTTTA * ** ** ** ** ***** * ** ** ***** ** ** ** ** *********** * Tapirus_terrestris AAGCCATATTATTTATATGCTCTGGATCCATCATCCACAACTTAAACAACGAACAAGACA Equus_caballus AAGCTATACTATTTATATGTTCCGGATCCATTATCCACAGCCTAAATGACGAGCAAGATA Coelodonta_antiquitatis AAGCCATGTTATTTATATGCTCCGGGTCTATTATCCACAACCTAAATGATGAACAAGATA Dicerorhinus_sumatrensis AAGCCATGTTATTCATGTGCTCCGGATCTATTATTCACAACCTAAACAACGAACAAGATA Rhinoceros_sondaicus AGGCCATACTATTCATATGCTCCGGATCTATCATTCATAATCTAAACAACGAACAAGACA Rhinoceros_unicornis AAGCTATACTATTCATATGTTCCGGATCTATTATTCACAACCTAAATAACGAACAAGACA Ceratotherium_simum AAGCCATACTATTCATATGCTCTGGGTCTATCATCCACAATCTAAACGACGAACAAGACA Diceros_bicornis AAGCCATACTATTTATGTGTTCCGGATCTATTATTCACAACCTAAATAACGAACAAGACA * ** ** **** ** ** ** ** ** ** ** ** * **** * ** ***** * Tapirus_terrestris TCCGAAAAATAGGCGGTCTATTCAAAGCCATGCCTTTTACCACAACCTCACTTATCGTAG Equus_caballus TCCGAAAAATAGGCGGACTATTTAATGCAATACCCTTCACCACCACATCTCTAATTATTG Coelodonta_antiquitatis TCCGAAAAATAGGCGGTCTATTCAAAACCATACCCTTCACTGCAACCTCCCTCATTATTG Dicerorhinus_sumatrensis TCCGAAAAATAGGTGGCCTATTCAAAACCATACCTTTTACCGCAACCTCTCTTATCATCG Rhinoceros_sondaicus TTCGAAAAATAGGCGGTCTATTTAAAACAATACCCTTTACTGCAACCTCCCTCACCATTG Rhinoceros_unicornis TCCGAAAAATAGGCGGCCTATTTAAAACAATACCCTTCACTGCAACCTCCCTTATTATTG Ceratotherium_simum TTCGAAAAATAGGCGGTCTATTCAAAGCAATACCCTTCACTTCAACCTCCCTTATTATCG Diceros_bicornis TTCGAAAAATAGGTGGTCTATTCAAAGTAATACCCTTCACTTCAACCTCCCTTATTATCG * *********** ** ***** ** ** ** ** ** * ** ** ** * * * Tapirus_terrestris GTAGCTTGGCACTCACTGGCACACCATTCCTCACAGGATTCTACTCTAAAGATTTAATTA Equus_caballus GCAGCCTTGCACTCACCGGAATTCCTTTCCTCACAGGCTTCTACTCCAAAGACCTCATCA Coelodonta_antiquitatis GAAGCCTTGCACTAACAGGCATGCCATTCCTTACAGGTTTCTACTCCAAAGACCTAATCA Dicerorhinus_sumatrensis GAAGCCTTGCACTCACAGGCATACCATTCCTCACGGGTTTCTATTCCAAAGATCTAATTA Rhinoceros_sondaicus GAAGCCTTGCACTCACAGGCATGCCATTCCTTACAGGCTTTTACTCCAAAGACTTAATCA Rhinoceros_unicornis GAAGCTTTGCACTCACAGGCATACCATTCCTCACAGGCTTTTACTCCAAAGACTTAATCA Ceratotherium_simum GAAGCCTCGCACTTACAGGCATACCATTCCTCACAGGTTTCTACTCCAAAGACCTAATCA Diceros_bicornis GAAGCCTTGCACTCACAGGTATACCATTCCTCACAGGCTTCTACTCCAAAGACCTAATCA * *** * ***** ** ** * ** ***** ** ** ** ** ** ***** * ** * Tapirus_terrestris TCGAAACCGCTAATATGTCATATACCAACGCCTGAGCCCTAACAATTAGCCTAATTGCCA Equus_caballus TCGAAACCGCCAACACATCGTACACCAACGCCTGAGCCCTACTAATAACTCTCATTGCCA Coelodonta_antiquitatis TCGAAACCGCCAACACATCATATACCAACGCCTGAGCCCTACTAGTTACTCTCATCGCTA Dicerorhinus_sumatrensis TTGAAACCGCCAACACATCATACACCAACGCCTGAGCCCTACTAGTTACACTCGTCGCTA Rhinoceros_sondaicus TCGAAACCGCCAACACATCATATACCAACGCCTGAGCCCTACTAATAACACTCATCGCCA Rhinoceros_unicornis TCGAAACCGCCAACACATCATATACCAACGCCTGAGCCCTACTAATAACACTCATCGCCA Ceratotherium_simum TCGAAACCGCCAACACATCATACACCAACGCCTGAGCCCTACTAATCACACTTATTGCCA Diceros_bicornis TCGAAACCGCTAACATATCATACACCAACGCCTGAGCCCTACTAATTACACTTATTGCCA * ******** ** * ** ** ****************** * * * ** * ** * Tapirus_terrestris CATCCTTAACGGCTGTATACAGCACCCGAATTATCTTCTTCGCACTCCTAGGACAGCCAC Equus_caballus CATCCCTCACAGCTGTCTACAGTACCCGAATCATCTTCTTTGCACTCCTAGGGCAACCCC Coelodonta_antiquitatis CATCCCTAACAGCTGCCTACAGCACCCGAATAATCTTCTTCACACTCCTAGGACAACCCC Dicerorhinus_sumatrensis CATCCCTAACTGCTGCTTACAGCACTCGAATAGTTTTCTTCACACTTCTAGGACAACCCC Rhinoceros_sondaicus CATCCCTGACAGCTGCCTACAGCACCCGAATAGTATTCTTCACACTCCTAGGACAACCCC Rhinoceros_unicornis CATCCCTAACAGCTGCCTACAGCACCCGAATGATCTTCTTCACACTTCTAGGACAACCCC Ceratotherium_simum CATCTCTAACAGCTGCCTACAGCACCCGAATAATCTTCTTTACACTTCTAGGACAACCTC Diceros_bicornis CATCCCTAACAGCTGCCTACAGCACCCGAATAATTTTCTTCACACTTCTAGGACAACCCC **** * ** **** ***** ** ***** * ***** **** ***** ** ** * Tapirus_terrestris GCTTTCCCACTCTCATTATAATTAATGAAAACAACCCCTCATTAATAAACTCTATCAAAC Equus_caballus GCTTCCTCCCTCTGACCTCAATCAACGAAAATAACCCCTTTCTAATTAACTCCATCAAAC Coelodonta_antiquitatis GCTTCCCAACCCTAGTCTCAATCAACGAAAACAACCCCTTCCTAATAAACTCTATCAAAC Dicerorhinus_sumatrensis GCTTCCCGACCTTAATCACGATCAACGAAAACAACCCCTTCCTAATAAACTCCATTAAAC Rhinoceros_sondaicus GTTTCCCAACCCTTATCACAATTAATGAAAACAATCCTCACCTAACAAGCTCCATTAAAC Rhinoceros_unicornis GTTTCCCAACCCTTATCACAATTAATGAAAATAACCCCCACCTAACAAACTCTATTAAAC Ceratotherium_simum GCTCCCTAACCCTTATCACAATCAATGAAAACAACCCCCTCCTAATAAACTCCATCAAAC Diceros_bicornis GTTTCCCAACCCTTGTCACAATCAACGAAAACAACCCCCTCCTAATAAACTCCATCAAAC * * * * * ** ** ***** ** ** *** * *** ** **** Tapirus_terrestris GACTCCTAATTGGAAGCATCTTTGCCGGCTTCTTTATCTCTAACAATATCTATCCTACCA Equus_caballus GCCTCTTAATTGGCAGCATTTTTGCCGGATTCTTCATCTCCAACAATATCTACCCCACAA Coelodonta_antiquitatis GTCTCTTAATTGGCAGCATCTTCGCCGGATTCCTCATCTCCAACAGCATCTATCCAACAA Dicerorhinus_sumatrensis GCCTCCTAATCGGCAGCATTTTCGCCGGGTTCCTTATCTCCAACAGCATCTACCCAACAA Rhinoceros_sondaicus GCCTCATAATTGGCAGCATCTTCGCCGGATTTTTCATTTCTAATAACATTTACCCAACAA Rhinoceros_unicornis GCCTCCTAATTGGCAGCATCTTCGCTGGATTTTTCATCTCTAATAACATCTACCCAACAA Ceratotherium_simum GCCTCCTAATCGGTAGCATCTTCGCCGGATTCTTCATCTCCAACAACATTTATCCAACAA Diceros_bicornis GCCTCCTAATCGGCAGCATCTTCGCCGGGTTCCTCATCTCTAACAGCATCTACCCAACAA * *** **** ** ***** ** ** ** ** * ** ** ** * ** ** ** ** * Tapirus_terrestris ATATTCCAGAAATAACTATACCTTACTATCTAAAAACAACAGCCCTTATCGTAACCATTT Equus_caballus CCGTCCCAGAAATAACCATACCTACTTACATAAAACTCACCGCCCTCGCAGTAACCATCC Coelodonta_antiquitatis CCATCCCAAAAATAACTATACCTTACTACCTTAAACTCACAGCCCTTGCCGTAACCATCC Dicerorhinus_sumatrensis CTATCCCAAAAATAACCATACCCTACTACCTAAAACTCACAGCCCTTGCCGTAACCATCC Rhinoceros_sondaicus CCACCCCAAAAATAACTATACCCCCCTACCTCAAACTTATAGCCCTCATTGTAACCATTC Rhinoceros_unicornis CCACCCCAAAAATAACCATACCCTCTTACCTCAAACTTATAGCCCTTATTGTAACCATCC Ceratotherium_simum CCATTCCAAAAACAACCATACCCCACTACCTCAAACTTACAGCCCTTGCCGTAACCATCC Diceros_bicornis CCATTCCAAAAATAACCATGCCCTACTACCTCAAACTCACAGCCCTCACCGTAACCATCC *** *** *** ** ** ** * *** * ***** ******** Tapirus_terrestris TAGGCTTCACCTTAGGACTTGAACTAAGTTTAATAACATATAACTTAAAACTTAAACACC Equus_caballus TAGGATTTACACTAGCCCTAGAACTAAGCTTGATAACCCATAACTTAAAACTAGAACACT Coelodonta_antiquitatis TAGGCTTCGCGCTAGCACTTGAACTCAGCCTTGCAACATACAATCTAAAACCCAAACATC Dicerorhinus_sumatrensis TAGGCTTCGCACTAGCACTTGAACTCAGCCTCGCAACATATAATCTAAAACCCAAACACC Rhinoceros_sondaicus TAGGCTTCGCACTAGCACTTGAACTCAGCCTCACAACATATAACCTAAAATTCAAACACC Rhinoceros_unicornis TAGGCTTCGCACTAGCACTCGAACTCAGCCTCGCAACATACAACCTAAAGTTCAAACATC Ceratotherium_simum TAGGCTTCATAATAGCACTTGAACTCAGCCTCGCAACATACAACCTAAAGCTCAAACACC Diceros_bicornis TAGGCTTCGCACTAGCACTTGAACTCAGCCTTGCAACATATAACCTAAAACCTAAACACC **** ** *** ** ***** ** * *** * ** **** **** Tapirus_terrestris CCTCAAACCTATTTAACTTCTCAAACCTTCTCGGATATTTCCCAACCATCATACACCGAC Equus_caballus CCACCAACGTATTCAAATTCTCCAACCTCCTAGGATACTACCCAACAATTATACACCGAC Coelodonta_antiquitatis CTTCTAACCTACTAAAATTCTCCAATCTCCTTGGATATTTCCCAACCATCTTTCACCGTC Dicerorhinus_sumatrensis CTTCTAACCCACTAAAATTCTCCTACCTTCTAGGATACTTCCCAACTATCTTTCATCGAC Rhinoceros_sondaicus CCTCAAACCCACTAAAATTTTCCAGCCTTCTAGGGTACTTCCCAACAATCTTTCACCGAC Rhinoceros_unicornis CCTCAAACCCACTAAAATTTTCCAGCCTTCTAGGGTACTTCCCAACAATCTTCCACCGCT Ceratotherium_simum CGTCAAGCCCATTAAAATTCTCCAATCTCCTCGGATACTTCCCAACCATTTTCCACCGAC Diceros_bicornis CCTCAAGCCTACTAAAATTCTCCAGCCTTCTCGGATACTTCCCAACCATTCTCCACCGAC * * * * * * ** ** ** ** ** ** ** * ****** ** * ** ** Tapirus_terrestris TCTCTCCACTCATAAACCTATCTATAAGTCAAAAATCAGCATCCCTATTATTAGACTCAA Equus_caballus TCCCACCGCTCGCTAACCTATCAATAAGCCAAAAATCAGCATCACTTCTACTAGACTCAA Coelodonta_antiquitatis TACCCCCATCTATAGGCCTACTAGCAAGCCAAAAATCAGCATCACTACTACTAGACTCAA Dicerorhinus_sumatrensis TACCCCCATCCATAAGCCTACTAGCAAGCCAAAAAGCAGCATCCCTGCTACTCGACTCAA Rhinoceros_sondaicus TGCCTACATCCATAAGCCTATTAGCAAGCCAAAAATCAGCATCACTACTACTAGACTCAA Rhinoceros_unicornis TACCTCCGTCCATGGGCCTTCTAGCAAGCCAAAAATCAGCATCTCTACTACTAGACTCAA Ceratotherium_simum TACCACCACTCATAGGCCTATCAACAAGCCAAAAATCAGCATCACTACTACTAGACCTAA Diceros_bicornis TACCACCATTCATAGGCCTATCAACAAGCCAAAAATCAGCATCACTATTACTAGACCTAA * * * *** *** ****** ******* ** ** * *** ** Tapirus_terrestris TCTGACTAGAAGCTATCCTACCAAAATCCGTCTCTCACCTTCAATTAAAAGCCTCAACAC Equus_caballus TCTGACTAGAAAACATCCTGCCAAAATCTATCTCCCAGTTCCAAATAAAAACCTCGATCC Coelodonta_antiquitatis TCTGACTAGAAACGATTCTACCAAAATCAATCTCCCAATTCCAAATAATCTCCTCAACAC Dicerorhinus_sumatrensis TCTGGCTAGAAAACATCCTACCAAAATCAATCTCACAATTTCAAATAAAAACCTCAATAC Rhinoceros_sondaicus CATGATTAGAAAACATCTTACCAAAATCAATCTCCCTATTCCAAATAAAAACCTCAACAC Rhinoceros_unicornis TATGACTAGAAAACATCTTACCAAAATCAATTTCCCTATTCCAAATAAAATCCTCAACAT Ceratotherium_simum TTTGACTAGAAAAAATTCTACCAAAATCAATCTCCCAATTCCAAGTAAAAACCTCAACAC Diceros_bicornis CTTGACTAGAAAGCATCCTACCAAAATCGATCTCCCAATTCCAAGTAAAAACCTCAACAC ** ***** ** * ******** * ** * * *** *** **** * Tapirus_terrestris TAATCTCAAACCAAAAAGGCCTAATTAAACTATATTTCCTCTCATTTCTTATCACTATAA Equus_caballus TAATTTCCACCCAAAAAGGACAAATCAAATTATATTTCCTCTCATTCCTCATCACCCTTA Coelodonta_antiquitatis TAGTATCAAACCAAAAAGGCCTAATTAAACTATATTTCCTCTCATTCCTTATCACCTTAG Dicerorhinus_sumatrensis TAGTATCAAACCAAAAAGGCCTAATCAAACTATACTTTCTATCATTCCTCATCACCTTGG Rhinoceros_sondaicus TGGTGTCGAACCAGAAAGGCCTAATCAAACTATATTTTCTCTCATTTCTCATCACCCTGA Rhinoceros_unicornis TAGTATCAAACCAAAAAGGCCTAATTAAATTATATTTTCTCTCATTCCTCATCACCCTGA Ceratotherium_simum TAGTGTCAAACCAAAAAGGCCTAATCAAACTATATTTCCTCTCATTCCTCGTCACCCTAA Diceros_bicornis TAGTATCAAACCAAAAAGGCCTAATCAAACTATATTTCCTCTCATTCCTCATCACCCTAA * * ** * *** ***** * *** *** **** ** ** ***** ** **** * Tapirus_terrestris CCCTAAGTCTACTCCTACTTAACCTCCACGGGTAACCTCTAAAATAACTAAAACACCAAT Equus_caballus CCCTAAGCATACTACTTTTTAATCTCCACGAGTAACCTCTAAAATTACCAAGACCCCAAC Coelodonta_antiquitatis CTCTAAGTCTACTCCTACTTATGCCCCACGAGTAACCTCTAAAATTACTAGTACACCCAC Dicerorhinus_sumatrensis CCCTAAGCCTACTCCTACTTATGCCCCACGAGTAATCTCCAAAATCACTAAAACACCCAC Rhinoceros_sondaicus CCCTGAGCCTGCTCCTACTTACGCCCCACGGGTAATCTCTAAAACAACTAAAACACCCAC Rhinoceros_unicornis CCCTAAGCCTACTCCTACTTACGCCCCACGGGTAACCTCTAAAACAACCAAAACACCTAC Ceratotherium_simum CCCTAAGCCTACTCCTACTTATGCCCCACGGGTAATCTCTAAAATCACTAAAACACCAAC Diceros_bicornis CCCTAAGCTTACTCTTACTTATGCCCCACGAGTAACCTCTAAAACTACTAAAACACCCAC * ** ** * ** * *** * ***** **** *** **** ** * ** ** * Tapirus_terrestris AAATAAAGATCAACCCGTAACAATAATAACTCAAACCCCATAACTATATAACGCAGCAAC Equus_caballus AAGCAACGATCAACCAGTCACAATCACAACCCAAGCCCCATAACTATACAATGCAGCAGC Coelodonta_antiquitatis AAACAACGACCAACCAGTCACCATAACAATCCAAACCCCATAACTATACAACGCAGAAAC Dicerorhinus_sumatrensis AAACAATGACCAGCCAGTTACCATAATAATCCAAACCCCATAACTATACAAAGCAGAAAC Rhinoceros_sondaicus AAACAACGACCACCCCGTAATAACAATAACCCAAACCCCATAACTATACAACGCAGAAAC Rhinoceros_unicornis AAATAATGACCACCCCGTCACAATAATAATCCAAACCCCATAACTATACAACGCAGAAAC Ceratotherium_simum AAACAACGACCAACCAGTTACAATAATAATCCAAACCCCATAACTATACAATGCAGAAAC Diceros_bicornis AAACAACGACCAACCAGTCACAATAATAATCCAAACCCCATAGCTATACAATGCAGAAAC ** ** ** ** ** ** * * * ** *** ******* ***** ** **** * * Tapirus_terrestris TCCTATAATTTCCCCATTAAAAACCCCTGAATCCTCAGTATCACAAATTACTCAATCCTC Equus_caballus CCCTATAATTTCCTCACTAAACGCCCCAGAATCTCCAGTATCATAAATAGCTCAAGCCCC Coelodonta_antiquitatis CCCAACAATTTCCTCACTAAAAACCTCAGAACTTCCACTATCACATATCACCCAATCCCC Dicerorhinus_sumatrensis CCCTACAATCTCCTCACTAAAAATCCCAGAATCTCCACTATCACAAACCACTCAATCCCC Rhinoceros_sondaicus CCCTACAATTTCCTCGCTAAAAATCCCAAAATCTCCACTATCACAAACCACTCAATCCCC Rhinoceros_unicornis CCCCACAATCTCCTCATTAAAAACACCAGAATCTCCACCATCACAAACCACCCAATCCCC Ceratotherium_simum CCCAACAATCTCCTCACTAAAAACCCCAAAACCCCCATTATCAGAAACCGCCCAATCCCC Diceros_bicornis CCCAACAATCTCCTCACTAAAGACTCCAAAATCCCCACTACCAGAAACCACCCAATCCCC ** * *** *** * **** * ** ** * ** * * * *** ** * Tapirus_terrestris CACACCACTGAATCCAAGCATAACTTCTGTCTCTGCATCTTTCAATACTCATAAAACTAA Equus_caballus CACACCACTAAACTTAAACACTACCCCCACTTCCTCACTCTTCAGAACATATAAAACCAA Coelodonta_antiquitatis CATACTACTAAACTTAAACATAATCTCCACCTCACCATTTTTAAAAAGATATAAAACCAA Dicerorhinus_sumatrensis CATACTACTGAACTCAAACACGACCCCCACCTCACCACTCTTAAAAAGATACAAGACCAA Rhinoceros_sondaicus TATACCACTAAATTTAAACACAACCTCCACCTCACCACTCTTAAATATATATAAAACCAA Rhinoceros_unicornis TATACCACTAAACTCAAACACAACCTCTACCTCACCATTCTTAAACATATATAAAACCAA Ceratotherium_simum CACACCACTAAAATTGAACACAACCTCCACCTCACCATTCTTATAAACATATAAAACCAA Diceros_bicornis CATGCCACCAAACTTGAATACAACTTCCACTTCACCACTCTTAAAAACATATAAAATCAA * * ** ** * * * * ** ** ** * * ** * ** Tapirus_terrestris AACAAACTCTATAAACAAACCTAAAATAAATGCACCTAAAACAACCACATTAGATACCCA Equus_caballus CATAACCTCCATCAACAACCCTAAAAGAAATACCCCCATAACAGTCGTATTAGACACCCA Coelodonta_antiquitatis TACAACCTCCATCAACACGCCCAAAATGAAAGCCCCTAAAACAGTCACATTAGATACTCA Dicerorhinus_sumatrensis CACAACCTCCATTATCACACCTAAAATAAACGCCCCTAAAACAGTTGCATTAGACACTCA Rhinoceros_sondaicus TATAACCTCCATCAGCACACCTAAGATAAATGCACTTAAAACAGTCGCATTAGACACTCA Rhinoceros_unicornis CATGGCCTCCATCAACACACCTAAAATAAACGTACTCAAAACAGTCGCATTAGACACCCA Ceratotherium_simum CACGACCTCTATTAATACACCTAAAACAAACGCACCTAAAACAGCTGCACTAGATACCCA Diceros_bicornis CATGACCTCCATTAATACACCCAAAACAAATGCACCCAAAACAGTTGCATTAGATACCCA * *** ** * * ** ** * ** * * **** * **** ** ** Tapirus_terrestris CACTTCTGGATATTGCTCAGTAGCCATAGCCGTTGTATAACCAAAAACCACCAACATACC Equus_caballus TACCTCAGGATACTGCTCAGTAGCCATAGCCGTTGTATAACCAAAAACAACCAACATTCC Coelodonta_antiquitatis CGCCTCAGGATACTGTTCAGTAGCTATAGCCGTTGTATAACCAAAAACCACTAACATCCC Dicerorhinus_sumatrensis CACCTCAGGGTACTGCTCAGTAGCTATAGCCGTTGTATAACCAAAAACCACTAATATCCC Rhinoceros_sondaicus TGCCTCAGGATACTGCTCGGTAGCTATAGCCGTTGTATAACCAAAAACCACCAACATCCC Rhinoceros_unicornis CACCTCAGGATATTGCTCGGTAGCTATAGCCGTCGTATAACCAAAAACTACTAACATCCC Ceratotherium_simum TACCTCAGGATACTGCTCAGTAGCTATAGCCGTCGTATAACCAAAAACCACCAACATCCC Diceros_bicornis CGTCTCAGGATACTGCTCAGTAGCTATAGCCGTTGTATAACCAAAAACCACCAACATTCC ** ** ** ** ** ***** ******** ************** ** ** ** ** Tapirus_terrestris CCCCAAATAAATCAAAAATACTATCAACCCTAAAAATGACCCGCCAAAATTCAAGATAAT Equus_caballus TCCCAAATAAATCAAAAACACCATCAACCCCAAAAAGGACCCTCCAAAATTCATAATAAT Coelodonta_antiquitatis ACCCAAATAAATTAAAAAGACCATTAACCCTAAAAAAGAACCCCCAAAACTCATTACAAT Dicerorhinus_sumatrensis ACCCAAATAAATTAAGAAAACTATTAACCCTAAAAAAGAACCCCCAAAACTCATTACAAT Rhinoceros_sondaicus ACCCAAATAAATCAAAAAAACCATTAACCCTAAAAAAGAACCTCCAAAACTTATCACAAT Rhinoceros_unicornis CCCCAAATAAATCAAAAAAACCATTAACCCTAAAAAAGAGCCCCCAAAACTCATCACGAT Ceratotherium_simum ACCCAAATAAATTAAAAAAACCATCAACCCCAAAAAAGAACCCCCAAAACTCATCACAAT Diceros_bicornis ACCTAAATAAACTAAAAAGACCATCAACCCCAAAAAAGAACCCCCAAAACTTATCACAAT ** ******* ** ** ** ** ***** ***** ** ** ****** * * * ** Tapirus_terrestris CCCACAACCAACCCCACCACTCACAATTAACACCAGGCCCCCATAAATAGGAGAAGGCTT Equus_caballus ACCACAACCTACCCCTCCACTTACAATCAGCACTAAACCCCCATAAATAGGTGAAGGTTT Coelodonta_antiquitatis ACCACAACCAACCCCACCACTCACAACCAATACCAAGCCCCCATAAATAGGCGAAGGTTT Dicerorhinus_sumatrensis ACCACAACCAACCCCACCACTCACAATTAACACCAAACCACCATAAATAGGTGAAGGTTT Rhinoceros_sondaicus ACCACAACCAATCCCACCACTTATGACCAACACTAAACCCCCATAGATAGGCGAAGGTTT Rhinoceros_unicornis ACCACAACCAACCCCACCACTTACAATCAACACCAGACCCCCATAAATAGGCGAAGGTTT Ceratotherium_simum ACCACAACCAAATCCACCACTCATAATCAACACTAAACCCCCGTAAATAGGTGAAGGTTT Diceros_bicornis ACCACAACCAAACCCACCACTTATAATCAACACCAAGCCCCCGTAAATAGGTGAAGGTTT ******** * ** ***** * * * ** * ** ** ** ***** ***** ** Tapirus_terrestris TGAAGAAAACCCTACAAAACCAATCACAAAAATAACACTCAAAACAAACACTACATACGT Equus_caballus TGAAGAAAACCCCACAAAACTAACAACAAAAATAACACTCAAAATAAACACAATATATGT Coelodonta_antiquitatis TGAAGAAAACCCCACAAAACTAATCACAAACACAATACTTAAAATAAATCCTATATATGT Dicerorhinus_sumatrensis TGAAGAAAACCCCACAAAACTAATCACAAATACAACACTCAAAATAAATCCAATATATGT Rhinoceros_sondaicus TGAAGAAAAACCAACAAAACTAATCACAAATACAATACTCAAAATAAATCCAATATACAT Rhinoceros_unicornis TGAAGAAAAACCAACAAAACTAATTACAAATACAATACTCAAAATAAATCCAATATAAAT Ceratotherium_simum TGAAGAAAACCCCACAAAACTAATTACAAATATGATACTCAAAATAAATCCAATATATGC Diceros_bicornis CGAAGAAAATCCCACAAAACCAATCACAAACATGATACTCAAAATAAATCCAATGTATGT ******** ** ******* ** ***** * * *** **** *** * * ** Tapirus_terrestris CATCATTATTCCCACATGGAATCTAACCATGACTAATGACATGAAAAATCATCGTTGTAC Equus_caballus CATCATTATTCCCACGTGGAATCTAACCACGACCAATGACATGAAAAATCATCGTTGTAT Coelodonta_antiquitatis CATCATTATTCTCACATGGACTCCAACCATGACCAATGACATGAAAAATCATCGTTGTAT Dicerorhinus_sumatrensis CATCATTATTCTTACATGGACTCCAACCATGACCAATGATATGAAAAACCATCGTTGTAC Rhinoceros_sondaicus TATCACTATTCTCACATGGACTTCAACCATGACCAATGACATGAAAAATCATCGTTGTAC Rhinoceros_unicornis CATCACTATTCTCACATGGACTTCAACCATGACCAATAACATGAAAAATTATCGTTGTAC Ceratotherium_simum TATCATTATTCTTACATGGACTCCAACCATGACCAACGGCATGAAAAACCTTCGTTGTAC Diceros_bicornis CATCATTATTCTCACATGGACTCCAACCATGACTAATGGCATGAAAAACCTTCGTTGTAC **** ***** ** **** * ***** *** ** ******** ******** Tapirus_terrestris TTCAACTACAAGAACACTTAATGACCAACATCCGAAAATCCCACCCGCTAATCAAAATTA Equus_caballus TTCAACTATAAGAACAC-CAATGACAAACATCCGGAAATCTCACCCACTAATTAAAATCA Coelodonta_antiquitatis TTCAACTACAAGAACAC-TAATGACTAACATCCGCAAATCCCACCCACTAATCAAAATTA Dicerorhinus_sumatrensis TTCAACTATAAGAACAC-TAATGACCAACATCCGCAAATCCCACCCACTAATCAAAATTA Rhinoceros_sondaicus CTCAACTATAAGAACAC-TAATGACTAACATTCGCAAATCTCACCCATTAATCAAAATTA Rhinoceros_unicornis TTCAACTATAAGAACAC-TAATGACTAACATCCGTAAATCTCACCCACTAGTTAAAATCA Ceratotherium_simum TTCAACTACAAGAACAC-CAATGACTAACATCCGTAAATCCCACCCACTAATCAAAATTA Diceros_bicornis TTCAACTACAAGAACAC-TAATGACTAACATCCGTAAATCCCACCCACTAATCAAAATTA ******* ******** ****** ***** ** ***** ***** ** * ***** * Tapirus_terrestris TCAATCACTCATTTATCGACCTACCAACCCCATCAAACATCTCATCCTGATGAAACTTTG Equus_caballus TCAATCACTCTTTTATTGACCTACCAGCCCCCTCAAACATTTCATCATGATGAAACTTCG Coelodonta_antiquitatis TCAACCACTCATTCATCGACCTACCCACCCCATCAAACATCTCATCCTGATGAAACTTCG Dicerorhinus_sumatrensis TCAGCCACTCATTTATCGACCTGCCTACCCCATCAAACATTTCATCCTGATGAAACTTTG Rhinoceros_sondaicus TTAACCATTCATTCATCGACCTACCTACCCCATCAAACATTTCATCTTGATGAAACTTTG Rhinoceros_unicornis TCAACCACTCATTCATCGACCTACCTACCCCATCAAACATCTCATCTTGATGAAACTTTG Ceratotherium_simum TCAACCACTCATTCATCGATCTGCCCACCCCATCAAACATCTCAGCCTGGTGAAATTTTG Diceros_bicornis TCAATCACTCATTCATCGACCTACCCACCCCATCAAACATTTCAGCCTGATGAAATTTTG * * ** ** ** ** ** ** ** **** ******** *** * ** ***** ** * Tapirus_terrestris GCTCCCTTTTAGGAATATGCCTAATCTTACAAATTATCACGGGCCTATTCTTAGCCATAC Equus_caballus GCTCCCTCCTAGGAATCTGCCTAATCCTCCAAATCTTAACAGGCCTATTCCTAGCCATAC Coelodonta_antiquitatis GCTCCCTATTAGGAATCTGCCTAATCCTACAAATCTTAACCGGACTATTCCTCGCAATAC Dicerorhinus_sumatrensis GCTCCCTACTAGGAATCTGCTTAATCTTACAAATCCTAACCGGACTATTCCTCGCAATAC Rhinoceros_sondaicus GCTCCCTATTAGGAATCTGCTTAATCTTACAGATCCTGACAGGACTATTCCTTGCCATAC Rhinoceros_unicornis GCTCCCTGTTAGGAATCTGCTTAATCTTACAGATCCTAACAGGACTATTCCTTGCCATAC Ceratotherium_simum GCTCCCTGCTAGGAATCTGCTTAATCTTACAAATTCTAACCGGACTATTCCTTGCCATAC Diceros_bicornis GCTCCCTACTAGGAATCTGCCTAATCCTACAAATCCTAACCGGACTATTTCTTGCCATAC ******* ******* *** ***** * ** ** * ** ** ***** * ** **** Tapirus_terrestris ACTATACATCAGATACAACCACTGCCTTCTCATCCGTAGCCCATATTTGCCGAGATGTAA Equus_caballus ACTACACATCAGACACGACAACTGCCTTCTCATCCGTCACTCACATCTGCCGAGACGTTA Coelodonta_antiquitatis ACTACACACCAGACACAACAACCGCCTTTTCATCCGTAGCCCACATTTGCCGAGATGTAA Dicerorhinus_sumatrensis ATTACACACCAGACACAACAACCGCCTTCTCATCCGTAGCCCACATCTGTCGAGACGTAA Rhinoceros_sondaicus ACTACACCCCAGACACAACAACTGCCTTTTCATCCGTAGCCCATATCTGCCGAGACGTAA Rhinoceros_unicornis ACTACACCCCAGACACAACAACCGCCTTTTCATCCGTCACCCATATCTGCCGAGACGTAA Ceratotherium_simum ACTACACACCAGACACAATAACTGCCTTCTCATCTGTCGCCCATATCTGTCGAGACGTGA Diceros_bicornis ATTACACACCAGATACAACAACTGCCTTCTCATCTGTTGCCCACATCTGTCGAGACGTAA * ** ** **** ** * ** ***** ***** ** * ** ** ** ***** ** * Tapirus_terrestris ATTACGGATGAATTATTCGCTATCTCCACGCTAACGGAGCATCCATATTCTTCATCTGCC Equus_caballus ACTACGGATGAATTATTCGCTACCTCCATGCCAACGGAGCATCAATATTTTTTATCTGCC Coelodonta_antiquitatis ACTACGGCTGAATAATCCGCTACACCCACGCCAACGGAGCATCCATATTTTTCATCTGCC Dicerorhinus_sumatrensis ACTACGGTTGAATTATCCGCTACACCCATGCCAACGGAGCATCCATATTCTTCATCTGCC Rhinoceros_sondaicus ATTACGGCTGAATAATTCGCTACCTCCATGCCAACGGAGCATCCATATTCTTCATCTGCC Rhinoceros_unicornis ATTACGGCTGAATAATTCGCTACCTCCATGCCAACGGAGCATCCATATTCTTCATCTGCC Ceratotherium_simum ATTACGGCTGAATTATCCGCTATCTCCATGCCAACGGAGCATCCATATTCTTTATCTGCC Diceros_bicornis ACTACGGCTGAATTATCCGCTACCTACACGCTAACGGAGCATCCATATTCTTTATCTGCC * ***** ***** ** ***** ** ** *********** ***** ** ******* Tapirus_terrestris TATTTATCCACGTAGGACGAGGTTTGTACTATGGATCCTACACATTCCTAGAAACATGAA Equus_caballus TCTTCATTCACGTAGGACGCGGCCTCTACTACGGCTCTTACACATTCCTAGAGACATGAA Coelodonta_antiquitatis TGTTCATCCATGTAGGACGAGGCCTTTACTACGGATCCTATACCTTCCTAGAGACCTGAA Dicerorhinus_sumatrensis TATTTATCCACGTAGGACGAGGCCTCTACTACGGATCCTACACCTTCCTAGAAACCTGAA Rhinoceros_sondaicus TATTTATTCATGTAGGACGAGGCCTTTACTACGGATCTCACACCTTCCTAGAAACTTGAA Rhinoceros_unicornis TATTTATTCATGTAGGACGAGGCCTTTACTATGGATCTTACACCTTCCTAGAAACTTGAA Ceratotherium_simum TATTCATCCACGTAGGACGCGGTATCTATTACGGATCATATACCTTCCTAGAAACCTGAA Diceros_bicornis TATTCATCCATATAGGACGCGGCCTCTATTACGGATCCTACACCTTCCTAGAAACCTGAA * ** ** ** ******* ** * ** ** ** ** * ** ******** ** **** Tapirus_terrestris ACATCGGAATTATTCTACTATTCACAGTGATGGCAACAGCATTCATAGGCTACGTCCTGC Equus_caballus ACATTGGAATCATCCTACTTTTCACAGTTATAGCTACAGCATTCATGGGCTATGTCCTAC Coelodonta_antiquitatis ACATCGGAACCATCCTCCTACTCACCCTAATAGCCACAGCATTCATAGGCTACGTCCTAC Dicerorhinus_sumatrensis ATATCGGAACCATCCTCCTACTTACCCTAATAGCTACAGCATTCATAGGCTACGTCCTAC Rhinoceros_sondaicus ACATCGGAATCATCCTACTACTTACCCTAATAGCCACAGCGTTCATAGGCTACGTCCTAC Rhinoceros_unicornis ACATTGGAATTATCCTACTATTTACCCTAATAGCCACAGCGTTCATAGGTTACGTCCTAC Ceratotherium_simum ACATCGGAGTTATCTTACTATTCACTCTAATAGCCACCGCATTCATAGGCTACGTCCTAC Diceros_bicornis ACATCGGAGTTATCCTACTATTTACCCTAATAGCCACTGCATTTATAGGCTATGTCCTAC * ** *** ** * ** * ** * ** ** ** ** ** ** ** ** ***** * Tapirus_terrestris CGTGAGGACAAATGTCCTTCTGAGGAGCAACCGTAATCACAAACCTCCTCTCAGCCATCC Equus_caballus CATGAGGCCAAATATCCTTTTGAGGAGCAACAGTCATCACGAACCTCCTATCAGCAATTC Coelodonta_antiquitatis CATGAGGCCAAATATCCTTCTGAGGAGCCACAGTCATCACAAACCTTCTCTCAGCTATCC Dicerorhinus_sumatrensis CATGAGGTCAAATATCCTTCTGAGGAGCCACAGTTATCACAAATCTCCTCTCAGCCATCC Rhinoceros_sondaicus CATGAGGTCAAATATCCTTCTGAGGGGCTACAGTCATTACAAATCTCCTCTCAGCCATCC Rhinoceros_unicornis CATGGGGCCAAATATCCTTCTGAGGAGCTACAGTCATTACAAACCTCCTCTCAGCCATCC Ceratotherium_simum CATGAGGCCAAATATCCTTCTGAGGGGCTACAGTCATCACAAACCTCCTCTCAGCTATCC Diceros_bicornis CATGAGGCCAAATATCTTTTTGAGGAGCCACAGTCATTACAAACCTCCTCTCAGCTATCC * ** ** ***** ** ** ***** ** ** ** ** ** ** ** ** ***** ** * Tapirus_terrestris CATACATTGGCACAAACCTCGTTGAATGAATCTGAGGAGGCTTTTCCGTTGATAAAGCCA Equus_caballus CCTACATCGGTACTACCCTCGTCGAGTGAATCTGAGGTGGATTCTCAGTAGACAAAGCCA Coelodonta_antiquitatis CTTACATCGGCACCGACCTTGTAGAATGAATCTGAGGCGGATTCTCTGTAGACAAAGCCA Dicerorhinus_sumatrensis CATACATCGGCACCGACCTTGTAGAATGAATCTGAGGGGGATTCTCCGTAGACAAAGCCA Rhinoceros_sondaicus CCTATATCGGTACCAACCTTGTAGAGTGAATCTGAGGAGGATTCTCAGTCGACAAAGCTA Rhinoceros_unicornis CCTATATTGGTACCAACCTTGTAGAGTGAATCTGAGGAGGATTCTCAGTCGACAAAGCCA Ceratotherium_simum CTTACATCGGCACCAACCTCGTAGAATGAATCTGAGGAGGATTTTCCGTTGACAAAGCCA Diceros_bicornis CCTATATCGGCACCAATCTTGTAGAATGAATCTGAGGAGGATTCTCCGTCGACAAAGCCA * ** ** ** ** ** ** ** *********** ** ** ** ** ** ***** * Tapirus_terrestris CCCTGACCCGATTTTTCGCATTTCACTTTATTCTCCCATTCATCATTACAGCCCTAGTAA Equus_caballus CCCTTACCCGATTTTTTGCTTTCCACTTCATCCTACCCTTCATCATCACAGCCCTGGTAG Coelodonta_antiquitatis CTCTTACCCGATTCTTTGCCTTCCATTTCATCCTTCCCTTCATCATTCTAGCTCTAGCAA Dicerorhinus_sumatrensis CCCTCACCCGGTTCTTTGCTTTCCACTTCATCCTCCCCTTCATCATCCTAGCCCTAGCAA Rhinoceros_sondaicus CCCTTACCCGATTCTTTGCCTTCCACTTCATCCTTCCCTTTATTATCCTAGCTCTAGCGA Rhinoceros_unicornis CCCTCACCCGATTTTTTGCCTTCCACTTTATCCTTCCCTTCATTATCCTAGCCCTAGCAA Ceratotherium_simum CACTTACACGATTCTTCGCCTTTCACTTTATCCTCCCCTTTATTATCATAGCCCTAGCAA Diceros_bicornis CACTTACACGATTCTTCGCTTTCCACTTTATTCTCCCCTTTATCATCTCAGCCCTAGCAA * ** ** ** ** ** ** ** ** ** ** ** ** ** ** ** *** ** * Tapirus_terrestris TCGTACACCTTCTATTTCTCCATGAAACAGGATCTAACAACCCATCAGGAGTCTCATCTG Equus_caballus TCGTACATTTACTATTTCTTCACGAAACAGGATCTAATAACCCCTCAGGAATCCCATCCG Coelodonta_antiquitatis TCACCCACCTACTATTCTTACACGAAACGGGATCCAACAACCCATCAGGAATCCCATCCA Dicerorhinus_sumatrensis TTACCCACCTGCTATTCCTACATGAAACAGGATCCAACAACCCATCAGGAATCCCATCTA Rhinoceros_sondaicus TCACCCACTTACTATTCCTACACGAAACAGGATCCAATAACCCATCAGGAATTCCATCTA Rhinoceros_unicornis TCACTCACCTACTATTCCTACACGAAACAGGGTCCAACAACCCATCAGGAATTCCATCCA Ceratotherium_simum TCACCCACCTACTATTCCTTCACGAAACAGGATCCAATAACCCATCAGGAATCCCATCCA Diceros_bicornis TCACCCACCTATTATTCCTACACGAAACAGGATCCAACAACCCATCAGGAATCCCATCCA * ** * **** * ** ***** ** ** ** ***** ****** * **** Tapirus_terrestris ACATAGACAAAATCCCATTCCACCCATATTACACAACCAAAGACATTTTAGGCTTTCTAG Equus_caballus ATATGGACAAAATCCCATTCCACCCATATTATACAATTAAAGACATCCTAGGACTCCTCC Coelodonta_antiquitatis ACATAGATAAAATTCCATTCCACCCCTACTACACAATCAAAGACATCCTAGGAGCCCTAC Dicerorhinus_sumatrensis ACATAGACAAAATCCCATTTCACCCATACTATACAATCAAAGACATCCTAGGAGCCCTAC Rhinoceros_sondaicus ACACAGACAAAATTCCATTCCACCCTTACTACACAATCAAAGACATCCTAGGAGCCCTGC Rhinoceros_unicornis ACATAGACAAAATCCCATTCCACCCTTACTACACAATCAAAGACATCCTAGGAGCCCTAC Ceratotherium_simum ACATAGACAAAATCCCATTCCACCCATACTACACAATCAAAGACATCCTGGGAATTTTAC Diceros_bicornis ATATAGACAAAATTCCATTCCACCCATACTACACAATCAAAGATATCCTAGGAATCCTAC * * ** ***** ***** ***** ** ** **** ***** ** * ** * Tapirus_terrestris TACTAATCTTAATACTCCTCATTCTAGTATTATTCTCACCCGACTTACTAGGGGACCCCG Equus_caballus TCCTGATCTTGCTCCTACTAACTCTAGTATTATTCTCCCCCGACCTCCTAGGAGACCCAG Coelodonta_antiquitatis TGTTAATCATAGCCCTACTCATCCTAGTCCTATTCTCACCTGATCTCCTAGGAGACCCAG Dicerorhinus_sumatrensis TTCTAATCCTAGCCCTACTCACCCTAGTTCTATTCTCGCCTGACCTCCTAGGAGACCCGG Rhinoceros_sondaicus TTCTAATTATAGTATTACTCACCCTAGTCCTATTCTTCCCCGACATCCTAGGGGACCCAG Rhinoceros_unicornis TTCTGATCCTAGTATTACTCATCCTAGTATTATTTTTCCCCGACATTTTGGGAGACCCAG Ceratotherium_simum TCCTAATCCTAGCACTACTCGCCCTAGTTCTATTCTCACCAGACATCCTAGGAGACCCTG Diceros_bicornis TCCTAATCCTAACACTACTCACCCTAGTCCTATTCTCACCCGATATCCTAGGAGACCCTG * * ** * * ** ***** **** * ** ** * * ** ***** * Tapirus_terrestris ATAACTACACACCAGCTAATCCTCTCAGCACTCCTCCACATATCAAACCAGAATGATATT Equus_caballus ACAACTACACCCCAGCTAACCCTCTCAGCACTCCCCCTCATATTAAACCAGAATGGTACT Coelodonta_antiquitatis ACAACTACACCCCTGCTAACCCCCTCAGCACCCCTCCACACATTAAACCAGAATGGTACT Dicerorhinus_sumatrensis ACAACTACACACCCGCCAACCCTCTCAGCACCCCTCCACACATTAAACCAGAATGGTACT Rhinoceros_sondaicus ACAACTACATCCCAGCCAACCCCCTCAGCACCCCTCCACATATCAAACCAGAATGGTATT Rhinoceros_unicornis ACAACTATACCCCAGCCAATCCCCTCAGCACCCCTCCACATATCAAACCAGAATGATACT Ceratotherium_simum ACAACTACACCCCTGCCAATCCTCTCAGCACTCCCCCACATATCAAACCAGAATGATACT Diceros_bicornis ACAACTACACCCCCGCTAACCCTCTCAGCACCCCTCCACACATCAAACCAGAGTGATATT * ***** * ** ** ** ** ******** ** ** ** ** ******** ** ** * Tapirus_terrestris TTCTATTTGCCTACGCAATTCTACGATCCATCCCCAACAAACTAGGAGGCGTGCTAGCCC Equus_caballus TCCTGTTTGCCTACGCCATCCTACGCTCCATTCCCAACAAACTAGGCGGCGTATTAGCCC Coelodonta_antiquitatis TCCTATTTGCCTACGCAATCCTACGATCTATTCCCAATAAACTAGGCGGTGTACTAGCCC Dicerorhinus_sumatrensis TCCTATTCGCCTACGCAATCCTACGATCCATCCCCAATAAACTAGGCGGCGTATTAGCCC Rhinoceros_sondaicus TCCTATTTGCTTACGCAATCCTACGATCCATCCCAAACAAACTAGGCGGCGTACTAGCCC Rhinoceros_unicornis TCCTATTTGCCTACGCAATCCTACGATCCATCCCAAACAAACTAGGCGGCGTACTAGCCC Ceratotherium_simum TTCTATTTGCTTACGCAATCCTACGATCCATCCCTAACAAACTAGGCGGCGTACTAGCCC Diceros_bicornis TCTTATTTGCCTATGCAATCCTACGATCCATCCCTAACAAACTAGGCGGCGTACTAGCCC * * ** ** ** ** ** ***** ** ** ** ** ******** ** ** ****** Tapirus_terrestris TTATCCTCTCTATTTTGATTCTAGCAATTATCCCAATACTCCATACATCAAAACAACGAA Equus_caballus TAATCCTCTCCATCCTGATCCTAGCACTCATCCCCACCCTCCACATATCAAAACAACGAA Coelodonta_antiquitatis TGACCTTTTCTATCCTAATCCTCCTCATCATCCCCTCCCTACACACATCCAAACAACGAA Dicerorhinus_sumatrensis TAGCCTTCTCCATTCTAATCTTACTCATCGTCCCTTCCCTCCACACATCCAAACAACGAA Rhinoceros_sondaicus TAACTTTCTCCATCCTAATCCTACTACTCATTCCCTCCCTACATACATCCAAACAACGAA Rhinoceros_unicornis TAGCCTTCTCTATCCTGATCCTACTACTCATCCCCTACCTACATACATCCAAACAACGAA Ceratotherium_simum TAGTACTATCCATCCTAACCCTACTTATTATCCCCTTTCTCCACACATCAAAACAACGAA Diceros_bicornis TAGCACTTTCCATCCTAATCCTACTCATTGTCCCCTTTCTCCACACATCCAAACAACGAA * * ** ** * * * * * ** ** ** * *** ********** Tapirus_terrestris GCATAATGTTTCGACCACTAAGCCAATGTGTATTCTGACTATTAGTAGCAGACCTACTTA Equus_caballus GCATAATATTCCGGCCTCTCAGCCAATGCGTATTCTGACTCTTAGTGGCAGACTTACTGA Coelodonta_antiquitatis GCATAATATTCCGGCCCCTAAGCCAATGCATATTCTGACTACTAGTAGCTGACTTACTTA Dicerorhinus_sumatrensis GCATAATATTCCGACCACTAAGCCAATGCGTATTTTGACTGTTAGTAGCCGACCTGCTCA Rhinoceros_sondaicus GCATAATATTCCGACCCCTAAGCCAATGCATATTTTGACTACTAGTAGCAGATCTACTTA Rhinoceros_unicornis GCATAATATTCCGACCCCTAAGCCAATGCATGTTCTGACTACTAGTAGCAGACCTACTTA Ceratotherium_simum GCATAATATTCCGACCCCTAAGCCAATGCATATTCTGACTACTAGTAGCTGACCTACTCA Diceros_bicornis GCATAATATTCCGACCCCTAAGCCAATGTATGTTCTGACTACTAGTAGCCGACTTACTCA ******* ** ** ** ** ******** * ** ***** **** ** ** * ** * Tapirus_terrestris CACTCACATGAATCGGAGGACAACCAGTTGAACACCCATTCATTATTATCGGCCAACTAG Equus_caballus CACTAACATGAATCGGCGGACAGCCAGTGGAACACCCATACGTAATTATCGGCCAACTGG Coelodonta_antiquitatis CACTCACATGAATTGGAGGCCAACCAGTCGAACACCCATTCATCATCATTGGCCAACTAG Dicerorhinus_sumatrensis CACTCACATGAATCGGAGGCCAACCAGTCGAACACCCATTCATTATCATCGGCCAACTGG Rhinoceros_sondaicus CACTTACATGGATCGGAGGCCAACCAGTCGAACACCCATTTATCATTATCGGCCAACTAG Rhinoceros_unicornis CACTCACATGAATCGGAGGCCAACCAGTCGAACACCCATTTATCATTATCGGCCAACTAG Ceratotherium_simum CACTCACATGAATCGGAGGTCAACCAGTAGAACACCCGTTCATCATTATTGGCCAACTAG Diceros_bicornis CACTTACATGAATCGGAGGACAACCAGTCGAGCACCCATTCATCATTATTGGCCAACTAG **** ***** ** ** ** ** ***** ** ***** * * ** ** ******** * Tapirus_terrestris CATCAATCCTATACTTCTCCCTAATCTTAGTGTTTATACCCCTTGCAAGCGCAATCGAAA Equus_caballus CCTCAATCCTCTACTTCTCCCTAATTCTCATTTTTATACCACTCGCAAGCACCATCGAAA Coelodonta_antiquitatis CATCCATCCTATACTTTACCTTAATCCTCGTACTCATACCACTCGCAGGTATCATTGAAA Dicerorhinus_sumatrensis CATCCATCCTATACTTCTCCTTAATCCTCGTACTCATACCACTTGCAGGTATCATTGAAA Rhinoceros_sondaicus CATCAATCTTATATTTCTCCCTAATTCTTGTACTCATACCCCTTGCAGGCATCATCGAAA Rhinoceros_unicornis CATCAATCTTATACTTCTCCCTAATTCTCGTACTCATACCACTCGCGGGCATTATCGAAA Ceratotherium_simum CATCAATCCTATACTTCACCCTAATCCTAGTACTTATACCCCTCGCAGGCATTATTGAAA Diceros_bicornis CATCAATCCTATATTTCTCCCTAATCCTAGTACTTATACCCCTTGCAGGCATTATCGAAA * ** *** * ** ** ** **** * * * ***** ** ** * ** **** Tapirus_terrestris ACAACTTCCTAAAATGAAG-AGTCTTTGTAGTATATCC---ATTACCCTGGTCTTGTAAA Equus_caballus ACAATCTTCTAAAATGAAG-AGTCCCTGTAGTATATCGCACATTACCCTGGTCTTGTAAA Coelodonta_antiquitatis ACAGCCTCATGAAATGAAG-AGTCTTTGTAGTATACTA---ATTACCCTGGTCTTGTAAA Dicerorhinus_sumatrensis ACAACCTTCTAAAATGAAG-AGTCTTTGTAGTATATTA---ATTACCCTGGTCTTGTAAA Rhinoceros_sondaicus ACAGCCTATTAAAATGAAGAAGTCTTTGTAGTATATTA---ATTACCCTGGTCTTGTAAA Rhinoceros_unicornis ACAACCTCTTAAAATGAAG-AGTCTTTGTAGTATACTA---ATTACCCTGGTCTTGTAAA Ceratotherium_simum ACAACCTCCTAAAGTGAAG-AGTCTTTGTAGTATATGA---ATTACTCTGGTCTTGTAAA Diceros_bicornis ACAACCTTCTGAAATGAAG-AGTCTTCGTAGTATATGA---ATTACCCTGGTCTTGTAAA *** * * ** ***** **** ******** ***** ************* Tapirus_terrestris CCAGAAAAGGAGA--ATTAGCCTCTCCCTAAGACT-TCAAGGAAGAAGCTATAGCCCCAC Equus_caballus CCAGAAAAGGGGGAAAACGTTTCCTCCCAAGGACTATCAAGGAAGAAGCTCTAGCTCCAC Coelodonta_antiquitatis CCAGAAAAGGAGAACACCA--CCCTCCCTAAGACTTTCAAGGAAGAAGCCCTAGCTCCAC Dicerorhinus_sumatrensis CCAGAAAAGGAGGATATTG--CCCTCCCCAAGACCTTCAAGGAAGAAGCCCTAGCTCCAC Rhinoceros_sondaicus CCAGAAAAGGAGAACACTA--CCCTCCCCAAGACTTTCAAGGAAGAAGCCCTAACTTCAC Rhinoceros_unicornis CCAGAAAAGGAGAACACTA--CCCTCCCCGAGACTTTCAAGGAAGAAGCCCTAACTTCAC Ceratotherium_simum CCAGAAAAGGAAAGCACCA--CTTTCCCCAAGACTTTCAAGGAAGAGGCCCTAGCCTCAC Diceros_bicornis CCAGAAAAGGAAAACACCA--CTTTCCCCAAGACTTTCAAGGAAGAGGCCCTAGCCCCAC ********** * **** *** ********** ** ** * *** Tapirus_terrestris CATCAACACCCAAAGCTGAAGTTCTACTTAAACTATTCCTTGAACA-----CCATTGAAT Equus_caballus CATCAACACCCAAAGCTGAAATTCTACTTAAACTATTCCTTGATT--TCTTCCCCTAAAC Coelodonta_antiquitatis CATCAACACCCAAAGCTGAAATTCTACTTAAACTATTCCTTGAACACTCCCTTCTTAAAC Dicerorhinus_sumatrensis CACCAGCACCCAAAGCTGGAATTCTACTTAAACTATTCCTTGAGCACT----TCTTAAAC Rhinoceros_sondaicus CATCAACACCCAAAGCTGAAATTCTACTTAAACTATTCCTTGACTACTCACCTCTTAAAC Rhinoceros_unicornis CATCAACACCCAAAGCTGAAATTCTACTTAAACTATTCCTTGAACACTCCTCTCTTAAAC Ceratotherium_simum CATCAACACCCAAAGCTGAAATTCTACTTAAACTACTCCTTGAACAATCGCCCCTTAAAC Diceros_bicornis CATCAACACCCAAAGCTGAAATTCTACTTAAACTATTCCCTGAACATTCCCCCTT---AT ** ** ************ * ************** *** *** * Tapirus_terrestris GATAAAAA--TACTATCGTGTGCCATATCAGTATTAAAAATTTTCTTTCCCCCCCCGTAG Equus_caballus GACAACAATTTACCCTCATGTGCTATGTCAGTATCAGATTATACCCCCACATAACACCAT Coelodonta_antiquitatis CAGAAGAC-ATCTCACCATGTGACACCTCAGTATCA-ATAATATCTGTCAC-CCGCTTAT Dicerorhinus_sumatrensis TACAAAAA-CCTTTATCATGTAACATGCCAGTATTA-ATAACGCTCACCAC-CCATCTAT Rhinoceros_sondaicus TACAGAAC-CTGTAACCATGTAACACGCTAGTATTACATAACTTTTCTC---------AT Rhinoceros_unicornis CACAAACC--CCCAACTATGTAACATGCCAGTATTA-GTGACTCCT------------AT Ceratotherium_simum CACAAAGCACCCTCA-CATGTAACACACCAGTATTA-ACATCACTTTCCTTGCCCACAAT Diceros_bicornis CACAAAGTACCCCCATCATGTAACATACCAGTATTG-ACGTCACTCTTCTTGCCCGCTAT * * *** * ***** * Tapirus_terrestris GTACCCC------------------------------TATGTACATCGTGCATTAAATTG Equus_caballus ACCCACCTGACATGCAATAT----CTTATGAATGGCCTATGTACGTCGTGCATTAAATTG Coelodonta_antiquitatis GTACGTCGTACATAACATGTTAG-GTTATATACCAGGTATGTATATCGTGCATTAAATTG Dicerorhinus_sumatrensis GTATATTGTACATGGTATGTTGA-GATACACCCCGC-TATGTACATCGTGCATTAAATGA Rhinoceros_sondaicus GTACTCTATACATAGTATATTAT-ATTACATTCTGATTATGTACATCGTGCATTAAATTG Rhinoceros_unicornis ATGTCTCATACATAATATATTAC-ATCACACTATGGTTATGTACATCGTGCATTAAATTG Ceratotherium_simum GCAATCTGTACTTGCCACGTTACAAGTACATCTCGGGTATGTACATCGTGCATTACATTG Diceros_bicornis GTAATTAGTGCATGTTATGCTATGAGTACATCCTGGGTATGTATATCGTGCATTAAATTG ****** ********** ** Tapirus_terrestris TCTGCCCCATGCAT-ATAAGCATGTACATTTAGGTTATTGATCTTGCATAAAAGCATTAA Equus_caballus TCTGCCCCATGAATAATAAGCATGTACA-TAATATCATTTATCTTACATA---------- Coelodonta_antiquitatis TTTGCCCCATGCAT-ATAAGCATGTACA-TAATACTATTAGTCTTGCATAAAA-CATTAG Dicerorhinus_sumatrensis TATGCCCCATGCAT-ATAAGCATGTACA-TAAAACTATTAATTTTACATAAAA-CATTGA Rhinoceros_sondaicus TTTGCCCCATGCAT-ATAAGCATGTACA-TTATATTATTAGTATTACATAAGA-CATCAG Rhinoceros_unicornis TTTGCCCCATGCAT-ATAAGCATGTACA-TTATATTATTGATCTTACATAAGA-CATTAG Ceratotherium_simum TTTACCCCATGCAT-ATAAGCATGTACA-TTATATTATTAATATTACATAACA-CATTAA Diceros_bicornis TTTGCCCCATGCAT-ATAAGCATATGTA-CTACATCATTAATGTTATATGACA-TATTAA * * ******* ** ******** * * * *** * ** ** Tapirus_terrestris GTGGTTGAATCAACATA-GCACTGGCAACCGAACATGGATATCGTCACTCCAAGAATAGA Equus_caballus ------------------------------------------------------------ Coelodonta_antiquitatis GTTATTAATAGGATATAGGATTTAAGCATAGGATATGAATATCCATGAACCAAATTAGCG Dicerorhinus_sumatrensis TTTATTAATAGAACATAGGAATCAAGCATAGAACATGAATATCCATAAACCAAAGTAATG Rhinoceros_sondaicus GTTATTAATAGGACATAAGTACCAAGCAGAGTACATGAGTATTCTTGATCCAAGT-TATA Rhinoceros_unicornis GTCATTAATAAGACATAAGCATTAAGCACAGTGTATGAATATCCTCGACCCAAGC-GATG Ceratotherium_simum ATTATTGATCGAGCATAAACACCCAACACAGTACATGGATATCCATATCCTAAAG-CCTA Diceros_bicornis ACTATTAATTGGACATAGATTTCTAGCATAGTACATGGATATTCATATCCTAAAG-ACTA Tapirus_terrestris ATGGTTGATCTTACATAATACATACTATTATTGATCGTACATACCCCATT-AAGTCAAAT Equus_caballus ----------------AGTACATTATATTATTGATCGTGCATACCCCATCCAAGTCAAAT Coelodonta_antiquitatis TTGATTAATATTGCATAGTACATATTATTATTGATCGTACATACCCCATTCAAGTCAAAT Dicerorhinus_sumatrensis TTGATTAATATTGCATAGTACATTATATTATTGATCGTACATACCCCATCCAAGTCAAAT Rhinoceros_sondaicus CTGATTAATATTGCATAGTACATATTATTGTTGATCGTACATACCCCATCCAAGTCAAAT Rhinoceros_unicornis TTGATTAATATTGCATAGTACATACAGTCATTGATCGTACATACCCCATTCAAGTCAAAT Ceratotherium_simum CTG-TTGATCTTGCATAATACATACTATTATTGATCGGACATACCCCATCCAAGTCAAAT Diceros_bicornis CTG-TTGATTTTGCATAATACATATTATTATTGATCGTACATACCCCATCCAAGTCAAAT * ***** * ******* ********** ********* Tapirus_terrestris CATTTCTCGACAACACGCGTATCACCTCCCATGC----GAATTCTTAGTTACCAACTCCC Equus_caballus CATTTCCAGTCAACACGCATATCACAGCCCATGTTCCACG-AGCTTAATCACCAAGCCGC Coelodonta_antiquitatis CATTTCCAGTCAACATGCGTATCATAACCAATGTATGAG--CGCTTAATCACCAAGCCGC Dicerorhinus_sumatrensis CATTTCTAGACAACATGCATATCATAACCAATGTATGAG--CGCTTAATCACCAAGCCGC Rhinoceros_sondaicus CATTTCTAGTCAACATGCATATCATAACCAATAGTCCACACCGCTTAATCAGCAAGCCGC Rhinoceros_unicornis CATTTCCAGTCAACATGCGTATCATAACCAATAGTCCGTACCGCTTAATCAGCAAGCCGC Ceratotherium_simum CATTTCCAGTCAACATGCGTATCACCACCAATATTCCGG--CGCTTAATCACCAAGCCGC Diceros_bicornis CATTTCCAGTCAACATGCGTATCACCACCAATATTCCGG--CGCTTAATCACCATGCCGC ****** * ***** ** ***** ** ** **** * * ** * * Tapirus_terrestris GAGAAATCACCAACCCTTGCGCGACTTACAT---TCCATTCTCGCTCCGGGCCCAT-TGA Equus_caballus GGGAAATCAGCAACCCTCCC---AACTACGTGTCCCAATCCTCGCTCCGGGCCCATCCAA Coelodonta_antiquitatis GGGAAATCATCAACCCTTCC---ACTGA-ATGTCCTCGTTCTCGCTCCGGGCCCAT-AAA Dicerorhinus_sumatrensis GGGAAATCATCAACCCTTCC---ACTCA-ATGCCCTCGTTCTCGCTCCGGGCCCAT-AAA Rhinoceros_sondaicus GGGAAATCATCAACCCTCTC---ACCTA-ATGCTCTCGTTCTCGCTCCGGGCCCAT-AAA Rhinoceros_unicornis GGGAAATCATCAACCCTCTC---ACCCA-ATGCCCTCGTTCTCGCTCCGGGCCCAT-GAA Ceratotherium_simum GGGAAATCATCAATCCTTCC---ACTTA-ATGCACTCGTTCTCGCTCCGGGCCCAT-AAC Diceros_bicornis GGGAAATCATCAATCCTTCC---ACTTA-ATGCCCTCGTTCTCGCTCCGGGCCCAT-AAC * ******* *** *** * * * * * **************** Tapirus_terrestris TTGTGGGGGTAGTTAAA-CTG-AGCTGTATCCGACATCTGGTTCTTACTTCAGGGCCA-T Equus_caballus ACGTGGGGGTTTCTACA-ATGAAACTATACCTGGCATCTGGTTCTTTCTTCAGGGCCATT Coelodonta_antiquitatis TCGTGGGGGTTTCTAGC-CTGAAACTATACCTGGCATCTGGTTCTTACTTCAGGGCCA-T Dicerorhinus_sumatrensis ATGTGGGGGTTTCTAGACCTGAAACTATACCTGGCATCTGGTTCTTACTTCAGGGCCA-T Rhinoceros_sondaicus TCGTGGGGGTTTCTATCCCTGAAACTATACCTGGCATCTGGTTCTTACTTCAGGACCA-T Rhinoceros_unicornis CTGTGGGGGTTTCTATGTCTGAAACTATACCTGGCATCTGGTTCTTACTTCAGGACCA-T Ceratotherium_simum ATGTGGGGGTTTCTAGACCTGAAACTATACCTGGCATCTGGTTCTTACCTCAGGGCCA-T Diceros_bicornis ACGTGGGGGTTTCTAGA-CTGAAACTATACCTGGCATCTGGTTCTTACTTCAGGGCCA-T ******** ** ** * ** ** * * ************ * ***** *** * Tapirus_terrestris CTCACCTAAAATCGCCTATTCTTTCCTCTTAAATAAGACATCTCGATGGACTAATGACTA Equus_caballus CCCACCCAACCTCGCCCATTCTTTCCCCTTAAATAAGACATCTCGATGGACTAATGACTA Coelodonta_antiquitatis CTCACCTAAAATCGCCTACTCTTTCCCCTTAAATAAGACATCTCGATGGACTAATGACTA Dicerorhinus_sumatrensis CTCACCTAAAATCGCCTATTCTTTCCTCTTAAATAAGACATCTCGATGGACTAATGACTA Rhinoceros_sondaicus CTCACCTAAAATCGCCCACTCTTTCCTCTTAAATAAGACATCTCGATGGACTAATGACTA Rhinoceros_unicornis CTCACCTAAAATCGCCCACTCTTTCCCCTTAAATAAGACATCTCGATGGACTAATGACTA Ceratotherium_simum CTCACCTAAAATCGCCTATTCTTTCCTCTTAAATAAGACATCTCGATGGACTAATGACTA Diceros_bicornis CTCACCTAAAATCGCCTATTCTTTCCCCTTAAATAAGACATCTCGATGGACTAATGACTA * **** ** ***** * ******* ********************************* Tapirus_terrestris ATCAGCCCATGCTCACACATAACTGTGATGCCATGCATTTGGTATTTTTTATAATTTGGG Equus_caballus ATCAGCCCATGCTCACACATAACTGTGATTTCATGCATTTGGTATCTTTTTATATTTGGG Coelodonta_antiquitatis ATCAGCCCATGATCACACATAACTGTGGTGTCATGCATTTGGTATCTTTTTTAATTTGGG Dicerorhinus_sumatrensis ATCAGCCCATGATCACACATAACTGTGGTGTCATGCATTTGGTATCTTTTTTAATTTGGG Rhinoceros_sondaicus ATCAGCCCATGATCACACATAACTGTGGTGTCATGCATTTGGTATTTTTTATATTTTGGG Rhinoceros_unicornis ATCAGCCCATGATCACACATAACTGTGGTGTCATGCATTTGGTATTTTTTATATTTTGGG Ceratotherium_simum ATCAGCCCATGATCACACATAACTGTGGTGTCATGCATTTGGTATCTTTTTTATTTTGGG Diceros_bicornis ATCAGCCCATGATCACACATAACTGTGGTGTCATGCATTTGGTATTTTTTATATTTTGGG *********** *************** * ************** **** ****** Tapirus_terrestris GATGCTATGACTCAGCTATGGCCGTCTGAGGCCTTGACACATTCAAGCAAATTGTAGCTG Equus_caballus GATGCTATGACTCAGCTATGGCCGTCAAAGGCCTCGACGCAGTCAATTAAATTGAAGCTG Coelodonta_antiquitatis GATGCTATGACTCAGCTATGGCCGTCAAAGGCCCTAACACAGGCAAGCAAATTGTAGCTG Dicerorhinus_sumatrensis GATGCTATGACTCAGCTATGGCCGTCAAAGGCCCTAACACAGGCAAATAAATTGTAGCTG Rhinoceros_sondaicus GATGCTATGACTCAGCTATGGCCGTCAAAGGCCCTAACACAGGCAAGCAAATTGTAGCTG Rhinoceros_unicornis GATGCTATGACTCAGCTATGGCCGTCAGAGGCCTTAACACAGGCAAGCAAATTGTAGCTG Ceratotherium_simum GATGCTGTGACTCAGCTATGGCCGTCAAAGGCCTTAACACAGTCAAGCAAATTGTAGCTG Diceros_bicornis GATGCTGTGACTCAGCTATGGCCGTCAGAGGCCTTAACACAGTCAAGCAAATTGTAGCTG ****** ******************* ***** ** ** *** ****** ***** Tapirus_terrestris GACTTAAGTTGAACGTGATTTACCCGCATCAGGTAACCATAAGGTGTTATTCAGTCAATG Equus_caballus GACTTAAATTGAACGTTATTCCTCCGCAT-CAGCAACCATAAGGTGTTATTCAGTCCATG Coelodonta_antiquitatis GACTTAAATTGAACGTTATTCCTCCGCAT-ATTCAACCATATGGTGTTATTCAGTCA--- Dicerorhinus_sumatrensis GACTTAAATTGAACGTTATTACTCCGCAT-AAGTAACCATATGGTGTTATTCAGTCAATG Rhinoceros_sondaicus GACTTAAATTGAACGTTATTCCTCCGCAT-ATTCAACCATATGGTGTTATTCAGTCA--- Rhinoceros_unicornis GACTTAAATTGAACGTTATTCCTCCGCAT-ATCCAACCATATGGTGTTATTCAGTCAATG Ceratotherium_simum GACTTAAATTGAGTACTATTCCTCCGCAT-ACTTTACCACATGGTGTTATTCAGTCAATG Diceros_bicornis GACTTAAATTGAACGTTATTCCTCCGCAT-GCCCAACCATATGGTGCTATTCAGTCA--- ******* **** *** ****** **** * **** ********* Tapirus_terrestris GTCACAGGACATACGTA--------CATACGCACACGCTTACACATACGTATACGCACAC Equus_caballus GTAGCGGGACATA----------------------------------------------- Coelodonta_antiquitatis ------------------------------------------------------------ Dicerorhinus_sumatrensis GAATCGGGACATA----------------------------------------------- Rhinoceros_sondaicus ------------------------------------------------------------ Rhinoceros_unicornis GAATCGGGACATA----------------------CACATACACGTACGCACACATGTAC Ceratotherium_simum GTTACAGGACATACGCATATACACGCATATACACGCATATACACGCATATACACGCATAT Diceros_bicornis ------------------------------------------------------------ Tapirus_terrestris GCTTACACATACGTATACACATACGCTTACACATACGTATACGCACACGCTTACACATAC Equus_caballus ----GGAAACAAGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCT Coelodonta_antiquitatis ------------------------------------------------------------ Dicerorhinus_sumatrensis ------------------------------------------------------------ Rhinoceros_sondaicus ------------------------------------------------------------ Rhinoceros_unicornis ACATGTACACATGTACACATGTACACATGTACACATGTACACATGTACACATGTACACAT Ceratotherium_simum ACACGCATATACACGCATATACACGCATATACACGCATATACACGCATATACACGCATAT Diceros_bicornis ------------------------------------------------------------ Tapirus_terrestris GTATACACATACGCTTACACATACGTATACACATACGCTTACACATACGTATACACATAC Equus_caballus GTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGC Coelodonta_antiquitatis ------------------------------------------------------------ Dicerorhinus_sumatrensis ------------------------------------------------------------ Rhinoceros_sondaicus ------------------------------------------------------------ Rhinoceros_unicornis GTACACATGTACACATGTACACATGTACACATGTACACATGTACACATGTACACATGTAC Ceratotherium_simum ACACGCATATACACGCATATACACGCATATACACGCATATACACGCATATACACGCATAT Diceros_bicornis ------------------------------------------------------------ Tapirus_terrestris GTATACACATACGTATACGCACACGCTTACACATACGTATACACATACGTATACACATAC Equus_caballus ACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCT Coelodonta_antiquitatis ------------------------------------------------------------ Dicerorhinus_sumatrensis ------------------------------------------------------------ Rhinoceros_sondaicus ------------------------------------------------------------ Rhinoceros_unicornis ACATGTACACATGTACACATGTACACATGTACACATGTACACATGTACACATGTACACAT Ceratotherium_simum ACACGCATATACACGCATATACACGCATATACACGCATATACACGCATATACACGCATAT Diceros_bicornis ------------------------------------------------------------ Tapirus_terrestris GTATACGCACACGCTTACACATACGTATACACATACGTATACACATACGTATACGCACAC Equus_caballus GTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGCACCTGTGC Coelodonta_antiquitatis ------------------------------------------------------------ Dicerorhinus_sumatrensis ----------ACACGTATCCAACCG----------------------------------- Rhinoceros_sondaicus ------------------------------------------------------------ Rhinoceros_unicornis GTACACATGTACACATGTACACATGTACACATGTACACATGTACACATGTACACATGTAC Ceratotherium_simum ACACGCATATACACGCATATACACGCATATACACGCATATACACGCATATACACGCATAT Diceros_bicornis ------------------------------------------------------------ Tapirus_terrestris GCTTACACATACGTATACACATACGTATACACATACGTATACACATACGTATACGCACAC Equus_caballus ACCTACCCGCGCAGT--------------------------------------------- Coelodonta_antiquitatis ------------------------------------------------------------ Dicerorhinus_sumatrensis ------------------------------------------------------------ Rhinoceros_sondaicus ------------------------------------------------------------ Rhinoceros_unicornis ACATGTACACATGTACACATGTACACATGTACACATGTACACGCACGCAGGCACGCGCAC Ceratotherium_simum ACACGCATATACACGCATATACACGCATATACACGCATATACACGCATATACACGCATAT Diceros_bicornis ------------------------------------------------------------ Tapirus_terrestris TTACACACCCATT-----AAGTACATGAT-----TATCTTAGCAAAC-CCCCCCTTCCCC Equus_caballus ------------------AAGCAAGTAATATAGCTTTCTTAATCAAACCCCCCCTACCCC Coelodonta_antiquitatis ------------------------------------------------------------ Dicerorhinus_sumatrensis ------------------AAATAAGCAAT-----TACCTTAACAAA--CCCCCCTACCCC Rhinoceros_sondaicus ------------------------------------------------------------ Rhinoceros_unicornis GCGCACACGCGTTAACTAAAGTAAATAAT-----TACCTTAACCAAACCCCCCCTTCCCC Ceratotherium_simum ACACACGCGCACACACTAAAATAAGCAATTACACTATCTTAGCAAA--CCCCCCCACCCC Diceros_bicornis ------------------------------------------------------------ Tapirus_terrestris CCATTAAAC-CTCGCGTC-CATGTATTCTCTAAAGCCTTGCCAAACCCCAAAAACAAAGC Equus_caballus CCATTAAAC-TCCACAT-ATGTACATTCAACACAATCTTGCCAAACCCCAAAAACAAGAC Coelodonta_antiquitatis -TATTAGAC-TCTACACCACATATACTCAATAAAATCTTGCCAAACCCCAAAAACAAGAC Dicerorhinus_sumatrensis CCACTAGAC-CTTACACCGCATATACTCTATAAAATCTTGCCAAACCCCAAAAACAAGAC Rhinoceros_sondaicus ----TAGAC-CCTACACCACATATACTTAATAAAATCTTGCCAAACCCCAAAAACAAGAT Rhinoceros_unicornis CCATTAGAC-CCTACACCACATATACTTAATAAAATCTTGCCAAACCCCAAAAACAAGAT Ceratotherium_simum CCATTAGAC-TCCACACCATATGTGCTTAATAAAACCTTGCCAAACCCCAAAAACAAGAT Diceros_bicornis --ATTAGACTCCCACACCACATGTACTTAATAAAACCTTGCCAAACCCCAAAAACAAGAT ** ** * * * * * ********************* Tapirus_terrestris TA---AATACACGA-AGTCTACAAAGTTTAACTTTTTCAA-------------------T Equus_caballus TAAACAATGCACAATACTTCATGAAGCTTAACCCTCGCATGCCAACCATAATAACTCAAC Coelodonta_antiquitatis TA---GGTATATAATTACACGCAAAGCCTAAGACCTTTTTCCCCCCTTCTTTCTCTCCAC Dicerorhinus_sumatrensis CA---AGTACACAATCACATGTAAAGCCCAAACTTCTCCT------------TTTCCCAT Rhinoceros_sondaicus TA---AGTACATAATTACATGTAAAGTCTATTTCCCCACT-----ACACACTTCTCCATA Rhinoceros_unicornis TA---AGTATATAATTACATGTAAAGCCTATTTTTTCCCCCACTATACACTTTCCTCATA Ceratotherium_simum CA---AGTACACAATTACATGTAAAGTCTAACCCCCTTCC-------------------- Diceros_bicornis CA---AGTACACAATTATATGTAAAGTCTAATCCCCTTTC-------------------- * * * * *** * Tapirus_terrestris TCAGCAAA------------------CCGCCCTAAACTAATACAAACATGCTACTTCAAC Equus_caballus ACACCTAACAATCTTAACAGAACTTTCCCCCCGCCATTAATACCAACATGCTACTTTAAT Coelodonta_antiquitatis CAACCAAA------------------CCCTTCTT--TTGATACCAACATGCTACTTTAAT Dicerorhinus_sumatrensis CAACCAAA------------------CCCTCCTT--TTGATACCAACATGCTACTTTAAT Rhinoceros_sondaicus TAACCAGA------------------CCCTTATT--TTGATACCAACATGCTACTTTAAT Rhinoceros_unicornis TAACCAAG------------------CCCTCATT--TTGATACCAACATGCTACTTTAAC Ceratotherium_simum --CATACA------------------CCCTTCTT--TTGATACCAACATGCTACTTTAAT Diceros_bicornis --CGCACA------------------CCTTCCTT--TTGATACCAGCATGCTACTTTAAC ** * **** * ********** ** Tapirus_terrestris CAATAAAATTTATGTAGACAGACATCCCCCTAGATCTGAAAAATTTTTTTTTAAAACGTT Equus_caballus CAATAAAATTTCCATAGACAGGCATCCCCCTAGATCTAA-------TTTTCTAA------ Coelodonta_antiquitatis CAATAAAATCCACGTAGACTCGTACCCCTCTAGATCCGA---------GCCCAAAAAATT Dicerorhinus_sumatrensis CAATAAAATTCACGTAGACTCGTACCCCTCTAGATCTGA--------CCCCAAAAA---- Rhinoceros_sondaicus CAATAAAATTCCCGTAGACTCATACCCCTCTAGAACTGA-------CTCCCAAAAAA--- Rhinoceros_unicornis CAATAAAATTCACGTAGACTCATACCCCTCTAGATCTGA-------CCTCCAAAAAA--- Ceratotherium_simum CAATAAAATCCACGTAGACTCATACCCCCCTAGATTTGA-------TTTCCAAAAA---- Diceros_bicornis CAATAAAATCCACGTAGACTCGTACCCCTCTAGATTTAA-------TTTCCAAAAA---- ********* ***** * *** ***** * ** Tapirus_terrestris CTCAA-------------TCACTTATAAA--------------ACAATAATAAACCCAAA Equus_caballus --------------------ATCTGTCAACCCTTC------------------------- Coelodonta_antiquitatis TTCAACGAGTTTAAACAACTAATCACCAACACCCCAACCCCACA--------AACCACAA Dicerorhinus_sumatrensis TTCAACG-------------AACCACCAACACCCCACAA-------------ACCATAAA Rhinoceros_sondaicus TTCAACGAGACC---TAGTCATCTAAAAACTCCCAATCGCTGCA--------CCCCCCCC Rhinoceros_unicornis TTTAACGGGGCC---TAATCATCTAAAAACTCTCAATCACCGCACAGGTGACCCCCCCCC Ceratotherium_simum TTCAACAACCC----TGATCACCCATAAACACCCCA-CACTCCATAA-----CCCCTAAA Diceros_bicornis TTCAACAATTC----TGATCACCCGCAAACACCTCA-CACCTCATAG-----CCCCCAAA * ** Tapirus_terrestris AATTAACT- Equus_caballus -TTCCCCC- Coelodonta_antiquitatis ATACACCT- Dicerorhinus_sumatrensis ACACACCT- Rhinoceros_sondaicus CCCCCCCCG Rhinoceros_unicornis CCACCCCCG Ceratotherium_simum ACTCATCT- Diceros_bicornis ACTCGCCT- *